RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 MAGI2Q86UL8 1455 aa14.93□□□□□ -0.02
RPS3-219ENST00000534440 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
RPS3-219ENST00000534440 HSPA2P54652 639 aa14.91□□□□□ -0.02
RPS3-219ENST00000534440 DUOX2Q9NRD8 1548 aa14.91□□□□□ -0.02
RPS3-219ENST00000534440 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
RPS3-219ENST00000534440 UNC13BO14795 1591 aa14.89□□□□□ -0.03
RPS3-219ENST00000534440 MLH3Q9UHC1 1453 aa14.89□□□□□ -0.03
RPS3-219ENST00000534440 PZPP20742 1482 aa14.88□□□□□ -0.03
RPS3-219ENST00000534440 KDM5DQ9BY66 1539 aa14.87□□□□□ -0.03
RPS3-219ENST00000534440 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
RPS3-219ENST00000534440 SIGLEC1Q9BZZ2 1709 aa14.86□□□□□ -0.03
RPS3-219ENST00000534440 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
RPS3-219ENST00000534440 ATP10AO60312 1499 aa14.85□□□□□ -0.03
RPS3-219ENST00000534440 MLECQ14165 292 aa14.85□□□□□ -0.03
RPS3-219ENST00000534440 DEPDC5O75140 1603 aa14.83□□□□□ -0.04
RPS3-219ENST00000534440 EIF2AK4Q9P2K8 1649 aaKnown RBP14.83□□□□□ -0.04
RPS3-219ENST00000534440 RIMS1Q86UR5 1692 aaKnown RBP14.83□□□□□ -0.04
RPS3-219ENST00000534440 TRIM52Q96A61 297 aa14.82□□□□□ -0.04
RPS3-219ENST00000534440 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
RPS3-219ENST00000534440 MROH1Q8NDA8 1641 aa14.81□□□□□ -0.04
RPS3-219ENST00000534440 A2MP01023 1474 aa14.81□□□□□ -0.04
RPS3-219ENST00000534440 IQGAP3Q86VI3 1631 aa14.81□□□□□ -0.04
RPS3-219ENST00000534440 CEBPAP49715 358 aaPredicted RBP14.8□□□□□ -0.04
RPS3-219ENST00000534440 CERKQ8TCT0 537 aa14.8□□□□□ -0.04
RPS3-219ENST00000534440 FAM135AQ9P2D6 1515 aa14.8□□□□□ -0.04
RPS3-219ENST00000534440 DHX29Q7Z478 1369 aaKnown RBP14.79□□□□□ -0.04
RPS3-219ENST00000534440 RNF17Q9BXT8 1623 aaKnown RBP14.78□□□□□ -0.04
RPS3-219ENST00000534440 PRDM15P57071 1507 aaPredicted RBP14.78□□□□□ -0.04
RPS3-219ENST00000534440 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
RPS3-219ENST00000534440 MPHOSPH9Q99550 1183 aa14.78□□□□□ -0.04
RPS3-219ENST00000534440 NUP155O75694 1391 aa14.77□□□□□ -0.04
RPS3-219ENST00000534440 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.05
RPS3-219ENST00000534440 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
RPS3-219ENST00000534440 ACIN1Q9UKV3 1341 aaKnown RBP14.75□□□□□ -0.05
RPS3-219ENST00000534440 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
RPS3-219ENST00000534440 REREQ9P2R6 1566 aa14.73□□□□□ -0.05
RPS3-219ENST00000534440 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
RPS3-219ENST00000534440 ANKRD30BQ9BXX2 1392 aa14.72□□□□□ -0.05
RPS3-219ENST00000534440 CEP152O94986 1710 aa14.7□□□□□ -0.06
RPS3-219ENST00000534440 KIF3BO15066 747 aa14.7□□□□□ -0.06
RPS3-219ENST00000534440 PKD2Q13563 968 aa14.7□□□□□ -0.06
RPS3-219ENST00000534440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.062e-21■□□□□ 8.6
RPS3-219ENST00000534440 TET3O43151 1660 aa14.7□□□□□ -0.06
RPS3-219ENST00000534440 E9PCH4 1651 aa14.69□□□□□ -0.06
RPS3-219ENST00000534440 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
RPS3-219ENST00000534440 FER1L4A9Z1Z3 1794 aa14.68□□□□□ -0.06
RPS3-219ENST00000534440 AGLP35573 1532 aa14.68□□□□□ -0.06
RPS3-219ENST00000534440 UHRF1BP1Q6BDS2 1440 aa14.67□□□□□ -0.06
RPS3-219ENST00000534440 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
RPS3-219ENST00000534440 LMTK2Q8IWU2 1503 aa14.67□□□□□ -0.06
RPS3-219ENST00000534440 ABCC3O15438 1527 aa14.66□□□□□ -0.06
RPS3-219ENST00000534440 PLA2R1Q13018 1463 aa14.66□□□□□ -0.06
RPS3-219ENST00000534440 RPRD2Q5VT52 1461 aaKnown RBP14.65□□□□□ -0.06
RPS3-219ENST00000534440 NEUROD1Q13562 356 aa14.65□□□□□ -0.06
RPS3-219ENST00000534440 PTPRTO14522 1441 aa14.64□□□□□ -0.07
RPS3-219ENST00000534440 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
RPS3-219ENST00000534440 KANK1Q14678 1352 aa14.63□□□□□ -0.07
RPS3-219ENST00000534440 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
RPS3-219ENST00000534440 PREX1Q8TCU6 1659 aa14.63□□□□□ -0.07
RPS3-219ENST00000534440 SPHKAPQ2M3C7 1700 aa14.62□□□□□ -0.07
RPS3-219ENST00000534440 STRCQ7RTU9 1775 aa14.62□□□□□ -0.07
RPS3-219ENST00000534440 TRPM2O94759 1503 aa14.61□□□□□ -0.07
RPS3-219ENST00000534440 CNTLNQ9NXG0 1405 aa14.6□□□□□ -0.07
RPS3-219ENST00000534440 GGT6Q6P531 493 aa14.6□□□□□ -0.07
RPS3-219ENST00000534440 NPATQ14207 1427 aa14.59□□□□□ -0.07
RPS3-219ENST00000534440 ZMYM3Q14202 1370 aa14.59□□□□□ -0.07
RPS3-219ENST00000534440 MSH5O43196 834 aa14.58□□□□□ -0.08
RPS3-219ENST00000534440 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.08
RPS3-219ENST00000534440 CLTCL1P53675 1640 aa14.58□□□□□ -0.08
RPS3-219ENST00000534440 TONSLQ96HA7 1378 aa14.58□□□□□ -0.08
RPS3-219ENST00000534440 LTBP4Q8N2S1 1624 aa14.57□□□□□ -0.08
RPS3-219ENST00000534440 UGGT1Q9NYU2 1555 aa14.56□□□□□ -0.08
RPS3-219ENST00000534440 ILDR2Q71H61 639 aa14.56□□□□□ -0.08
RPS3-219ENST00000534440 C3P01024 1663 aa14.55□□□□□ -0.08
RPS3-219ENST00000534440 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
RPS3-219ENST00000534440 CCDC144AA2RUR9 1427 aa14.55□□□□□ -0.08
RPS3-219ENST00000534440 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
RPS3-219ENST00000534440 SYNMO15061 1565 aa14.53□□□□□ -0.08
RPS3-219ENST00000534440 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
RPS3-219ENST00000534440 WASHC2CQ9Y4E1 1318 aa14.53□□□□□ -0.08
RPS3-219ENST00000534440 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
RPS3-219ENST00000534440 L3MBTL2Q969R5 705 aa14.52□□□□□ -0.09
RPS3-219ENST00000534440 NOS1P29475 1434 aa14.51□□□□□ -0.09
RPS3-219ENST00000534440 DISP3Q9P2K9 1392 aa14.51□□□□□ -0.09
RPS3-219ENST00000534440 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
RPS3-219ENST00000534440 SPATA31E1Q6ZUB1 1445 aa14.5□□□□□ -0.09
RPS3-219ENST00000534440 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
RPS3-219ENST00000534440 MROH2AA6NES4 1674 aa14.5□□□□□ -0.09
RPS3-219ENST00000534440 PPP1R15AO75807 674 aaPredicted RBP14.5□□□□□ -0.09
RPS3-219ENST00000534440 PIK3C2BO00750 1634 aa14.5□□□□□ -0.09
RPS3-219ENST00000534440 SOCS7O14512 581 aa14.48□□□□□ -0.09
RPS3-219ENST00000534440 ERVK-7P63135 1459 aa14.48□□□□□ -0.09
RPS3-219ENST00000534440 CFAP65Q6ZU64 1925 aaKnown RBP14.48□□□□□ -0.09
RPS3-219ENST00000534440 ZNF335Q9H4Z2 1342 aaPredicted RBP14.47□□□□□ -0.09
RPS3-219ENST00000534440 ADGRB3O60242 1522 aa14.47□□□□□ -0.09
RPS3-219ENST00000534440 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
RPS3-219ENST00000534440 PPP4R3CPQ6ZMV5 832 aa14.46□□□□□ -0.09
RPS3-219ENST00000534440 SPATA31D1Q6ZQQ2 1576 aa14.45□□□□□ -0.1
RPS3-219ENST00000534440 KIF1BO60333 1816 aa14.44□□□□□ -0.1
RPS3-219ENST00000534440 NBPF8Q3BBV2 869 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms