RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
PAX6-230ENST00000534390 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
PAX6-230ENST00000534390 EIF2AK4Q9P2K8 1649 aaKnown RBP24.42■■□□□ 1.5
PAX6-230ENST00000534390 ANKRD30AQ9BXX3 1397 aa24.42■■□□□ 1.5
PAX6-230ENST00000534390 KDM5DQ9BY66 1539 aa24.41■■□□□ 1.5
PAX6-230ENST00000534390 WASHC2CQ9Y4E1 1318 aa24.4■■□□□ 1.5
PAX6-230ENST00000534390 RNF17Q9BXT8 1623 aaKnown RBP24.39■■□□□ 1.49
PAX6-230ENST00000534390 SETD1BQ9UPS6 1966 aaKnown RBP24.37■■□□□ 1.49
PAX6-230ENST00000534390 ITGAEP38570 1179 aa24.36■■□□□ 1.49
PAX6-230ENST00000534390 NPATQ14207 1427 aa24.35■■□□□ 1.49
PAX6-230ENST00000534390 ERBINQ96RT1 1412 aa24.35■■□□□ 1.49
PAX6-230ENST00000534390 FAM135AQ9P2D6 1515 aa24.35■■□□□ 1.49
PAX6-230ENST00000534390 PTPRKQ15262 1439 aa24.33■■□□□ 1.49
PAX6-230ENST00000534390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.32■■□□□ 1.48
PAX6-230ENST00000534390 NCOA1Q15788 1441 aa24.32■■□□□ 1.48
PAX6-230ENST00000534390 MROH1Q8NDA8 1641 aa24.31■■□□□ 1.48
PAX6-230ENST00000534390 ADGRL2O95490 1459 aa24.31■■□□□ 1.48
PAX6-230ENST00000534390 ZC3H13Q5T200 1668 aaKnown RBP24.3■■□□□ 1.48
PAX6-230ENST00000534390 ABCC3O15438 1527 aa24.3■■□□□ 1.48
PAX6-230ENST00000534390 CEP152O94986 1710 aa24.3■■□□□ 1.48
PAX6-230ENST00000534390 MYO3AQ8NEV4 1616 aa24.29■■□□□ 1.48
PAX6-230ENST00000534390 PZPP20742 1482 aa24.28■■□□□ 1.48
PAX6-230ENST00000534390 FBXO31Q5XUX0 539 aaPredicted RBP24.27■■□□□ 1.48
PAX6-230ENST00000534390 PRDM15P57071 1507 aaPredicted RBP24.25■■□□□ 1.47
PAX6-230ENST00000534390 KANK1Q14678 1352 aa24.25■■□□□ 1.47
PAX6-230ENST00000534390 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
PAX6-230ENST00000534390 TNRQ92752 1358 aa24.24■■□□□ 1.47
PAX6-230ENST00000534390 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
PAX6-230ENST00000534390 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
PAX6-230ENST00000534390 ANKRD50Q9ULJ7 1429 aa24.22■■□□□ 1.47
PAX6-230ENST00000534390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.21■■□□□ 1.47
PAX6-230ENST00000534390 ZNF142P52746 1687 aaPredicted RBP24.21■■□□□ 1.47
PAX6-230ENST00000534390 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
PAX6-230ENST00000534390 ROCK1Q13464 1354 aa24.18■■□□□ 1.46
PAX6-230ENST00000534390 CFAP65Q6ZU64 1925 aaKnown RBP24.18■■□□□ 1.46
PAX6-230ENST00000534390 STRCQ7RTU9 1775 aa24.17■■□□□ 1.46
PAX6-230ENST00000534390 A2ML1A8K2U0 1454 aa24.16■■□□□ 1.46
PAX6-230ENST00000534390 ERVK-7P63135 1459 aa24.14■■□□□ 1.46
PAX6-230ENST00000534390 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
PAX6-230ENST00000534390 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
PAX6-230ENST00000534390 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
PAX6-230ENST00000534390 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
PAX6-230ENST00000534390 NCKAP5LQ9HCH0 1330 aa24.09■■□□□ 1.45
PAX6-230ENST00000534390 LMTK2Q8IWU2 1503 aa24.08■■□□□ 1.45
PAX6-230ENST00000534390 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.44
PAX6-230ENST00000534390 UNC13BO14795 1591 aa24.08■■□□□ 1.44
PAX6-230ENST00000534390 EFCAB6Q5THR3 1501 aa24.06■■□□□ 1.44
PAX6-230ENST00000534390 UGGT1Q9NYU2 1555 aa24.06■■□□□ 1.44
PAX6-230ENST00000534390 PLA2R1Q13018 1463 aa24.06■■□□□ 1.44
PAX6-230ENST00000534390 PTPRTO14522 1441 aa24.02■■□□□ 1.44
PAX6-230ENST00000534390 TET3O43151 1660 aa24.02■■□□□ 1.44
PAX6-230ENST00000534390 THEMISQ8N1K5 641 aaPredicted RBP24.02■■□□□ 1.44
PAX6-230ENST00000534390 PKD2Q13563 968 aa24.01■■□□□ 1.43
PAX6-230ENST00000534390 NUP155O75694 1391 aa24.01■■□□□ 1.43
PAX6-230ENST00000534390 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
PAX6-230ENST00000534390 POLR1AO95602 1720 aaPredicted RBP23.99■■□□□ 1.43
PAX6-230ENST00000534390 STAG3Q9UJ98 1225 aa23.98■■□□□ 1.43
PAX6-230ENST00000534390 IQGAP3Q86VI3 1631 aa23.98■■□□□ 1.43
PAX6-230ENST00000534390 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
PAX6-230ENST00000534390 NAIPQ13075 1403 aa23.96■■□□□ 1.43
PAX6-230ENST00000534390 PIK3C2BO00750 1634 aa23.95■■□□□ 1.43
PAX6-230ENST00000534390 SYNMO15061 1565 aa23.95■■□□□ 1.43
PAX6-230ENST00000534390 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
PAX6-230ENST00000534390 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
PAX6-230ENST00000534390 E9PCH4 1651 aa23.92■■□□□ 1.42
PAX6-230ENST00000534390 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
PAX6-230ENST00000534390 NOS1P29475 1434 aa23.92■■□□□ 1.42
PAX6-230ENST00000534390 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
PAX6-230ENST00000534390 IDI1Q13907 227 aa23.9■■□□□ 1.42
PAX6-230ENST00000534390 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
PAX6-230ENST00000534390 CERKQ8TCT0 537 aa23.89■■□□□ 1.41
PAX6-230ENST00000534390 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
PAX6-230ENST00000534390 NPHP4O75161 1426 aaPredicted RBP23.86■■□□□ 1.41
PAX6-230ENST00000534390 SLC52A1Q9NWF4 448 aa23.86■■□□□ 1.41
PAX6-230ENST00000534390 ZNF335Q9H4Z2 1342 aaPredicted RBP23.85■■□□□ 1.41
PAX6-230ENST00000534390 ADGRB3O60242 1522 aa23.85■■□□□ 1.41
PAX6-230ENST00000534390 IQGAP1P46940 1657 aa23.85■■□□□ 1.41
PAX6-230ENST00000534390 SCAF11Q99590 1463 aaKnown RBP23.84■■□□□ 1.41
PAX6-230ENST00000534390 CHGAP10645 457 aaKnown RBP23.84■■□□□ 1.41
PAX6-230ENST00000534390 EID1Q9Y6B2 187 aa23.84■■□□□ 1.41
PAX6-230ENST00000534390 TXNDC2Q86VQ3 553 aa23.83■■□□□ 1.41
PAX6-230ENST00000534390 SLIT1O75093 1534 aa23.82■■□□□ 1.4
PAX6-230ENST00000534390 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
PAX6-230ENST00000534390 TMEM2Q9UHN6 1383 aa23.81■■□□□ 1.4
PAX6-230ENST00000534390 FBXO41Q8TF61 875 aa23.81■■□□□ 1.4
PAX6-230ENST00000534390 ARHGAP23Q9P227 1491 aa23.81■■□□□ 1.4
PAX6-230ENST00000534390 LTBP4Q8N2S1 1624 aa23.81■■□□□ 1.4
PAX6-230ENST00000534390 MED14O60244 1454 aa23.8■■□□□ 1.4
PAX6-230ENST00000534390 LTKP29376 864 aa23.79■■□□□ 1.4
PAX6-230ENST00000534390 MYO5BQ9ULV0 1848 aa23.79■■□□□ 1.4
PAX6-230ENST00000534390 SPHKAPQ2M3C7 1700 aa23.79■■□□□ 1.4
PAX6-230ENST00000534390 SLC4A1APQ9BWU0 796 aaKnown RBP23.75■■□□□ 1.39
PAX6-230ENST00000534390 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
PAX6-230ENST00000534390 TMEM131LA2VDJ0 1609 aa23.74■■□□□ 1.39
PAX6-230ENST00000534390 BCANQ96GW7 911 aa23.74■■□□□ 1.39
PAX6-230ENST00000534390 PPP1R15AO75807 674 aaPredicted RBP23.73■■□□□ 1.39
PAX6-230ENST00000534390 RIMS2Q9UQ26 1411 aa23.7■■□□□ 1.38
PAX6-230ENST00000534390 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
PAX6-230ENST00000534390 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
PAX6-230ENST00000534390 TRPM2O94759 1503 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms