RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 CCDC88BA6NC98 1476 aa8.67□□□□□ -1.02
CHEK1-216ENST00000534070 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
CHEK1-216ENST00000534070 LOC102724159A0A0B4J2E5 919 aa8.66□□□□□ -1.02
CHEK1-216ENST00000534070 PWP2Q15269 919 aaKnown RBP8.66□□□□□ -1.02
CHEK1-216ENST00000534070 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.66□□□□□ -1.02
CHEK1-216ENST00000534070 ANKRD62A6NC57 917 aa8.65□□□□□ -1.02
CHEK1-216ENST00000534070 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
CHEK1-216ENST00000534070 CUX1P39880 1505 aa8.65□□□□□ -1.02
CHEK1-216ENST00000534070 ERICH3Q5RHP9 1530 aa8.65□□□□□ -1.02
CHEK1-216ENST00000534070 GIMAP6Q6P9H5 292 aa8.65□□□□□ -1.02
CHEK1-216ENST00000534070 RUSC2Q8N2Y8 1516 aa8.64□□□□□ -1.03
CHEK1-216ENST00000534070 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
CHEK1-216ENST00000534070 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
CHEK1-216ENST00000534070 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
CHEK1-216ENST00000534070 SLC52A1Q9NWF4 448 aa8.62□□□□□ -1.03
CHEK1-216ENST00000534070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.033e-6■■□□□ 11.4
CHEK1-216ENST00000534070 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
CHEK1-216ENST00000534070 TEX2Q8IWB9 1127 aa8.61□□□□□ -1.03
CHEK1-216ENST00000534070 FOXD4L6Q3SYB3 417 aaPredicted RBP8.6□□□□□ -1.03
CHEK1-216ENST00000534070 FOXD4L3Q6VB84 417 aaPredicted RBP8.6□□□□□ -1.03
CHEK1-216ENST00000534070 RIPOR2Q9Y4F9 1068 aa8.6□□□□□ -1.03
CHEK1-216ENST00000534070 CNPY4Q8N129 248 aa8.6□□□□□ -1.03
CHEK1-216ENST00000534070 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
CHEK1-216ENST00000534070 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
CHEK1-216ENST00000534070 ANKRD13AQ8IZ07 590 aa8.59□□□□□ -1.03
CHEK1-216ENST00000534070 VTI1AQ96AJ9 217 aa8.59□□□□□ -1.03
CHEK1-216ENST00000534070 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
CHEK1-216ENST00000534070 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHEK1-216ENST00000534070 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
CHEK1-216ENST00000534070 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
CHEK1-216ENST00000534070 DMRT2Q9Y5R5 561 aa8.59□□□□□ -1.03
CHEK1-216ENST00000534070 PPRC1Q5VV67 1664 aaKnown RBP8.58□□□□□ -1.04
CHEK1-216ENST00000534070 POM121CA8CG34 1229 aa8.58□□□□□ -1.04
CHEK1-216ENST00000534070 RAB11FIP3O75154 756 aa8.58□□□□□ -1.04
CHEK1-216ENST00000534070 PEX14O75381 377 aa8.58□□□□□ -1.04
CHEK1-216ENST00000534070 SAMD9Q5K651 1589 aa8.58□□□□□ -1.04
CHEK1-216ENST00000534070 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
CHEK1-216ENST00000534070 COG6Q9Y2V7 657 aa8.58□□□□□ -1.04
CHEK1-216ENST00000534070 PPP1R37O75864 691 aa8.57□□□□□ -1.04
CHEK1-216ENST00000534070 FAM9BQ8IZU0 186 aa8.57□□□□□ -1.04
CHEK1-216ENST00000534070 PPME1Q9Y570 386 aa8.57□□□□□ -1.04
CHEK1-216ENST00000534070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.57□□□□□ -1.04
CHEK1-216ENST00000534070 HNRNPUL2Q1KMD3 747 aaKnown RBP8.57□□□□□ -1.04
CHEK1-216ENST00000534070 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
CHEK1-216ENST00000534070 HIRIP3Q9BW71 556 aaPredicted RBP8.56□□□□□ -1.04
CHEK1-216ENST00000534070 SPINK5Q9NQ38 1064 aaPredicted RBP8.56□□□□□ -1.04
CHEK1-216ENST00000534070 NCLP19338 710 aaKnown RBP8.55□□□□□ -1.04
CHEK1-216ENST00000534070 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
CHEK1-216ENST00000534070 PABPN1Q86U42 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHEK1-216ENST00000534070 ANP32EQ9BTT0 268 aa8.55□□□□□ -1.04
CHEK1-216ENST00000534070 LRRIQ1Q96JM4 1722 aa8.55□□□□□ -1.04
CHEK1-216ENST00000534070 TXNDC2Q86VQ3 553 aa8.55□□□□□ -1.04
CHEK1-216ENST00000534070 BCORL1Q5H9F3 1711 aa8.54□□□□□ -1.04
CHEK1-216ENST00000534070 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
CHEK1-216ENST00000534070 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
CHEK1-216ENST00000534070 KLHL42Q9P2K6 505 aa8.54□□□□□ -1.04
CHEK1-216ENST00000534070 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
CHEK1-216ENST00000534070 EXOC8Q8IYI6 725 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 IFT140Q96RY7 1462 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 MS4A1P11836 297 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
CHEK1-216ENST00000534070 CALR3Q96L12 384 aaKnown RBP8.53□□□□□ -1.04
CHEK1-216ENST00000534070 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
CHEK1-216ENST00000534070 TCF3P15923 654 aa8.52□□□□□ -1.05
CHEK1-216ENST00000534070 ANAPC15P60006 121 aa8.52□□□□□ -1.05
CHEK1-216ENST00000534070 SUGT1Q9Y2Z0 365 aa8.52□□□□□ -1.05
CHEK1-216ENST00000534070 EVI5LQ96CN4 794 aa8.51□□□□□ -1.05
CHEK1-216ENST00000534070 STAG3Q9UJ98 1225 aa8.51□□□□□ -1.05
CHEK1-216ENST00000534070 PROCA1Q8NCQ7 364 aaPredicted RBP8.51□□□□□ -1.05
CHEK1-216ENST00000534070 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
CHEK1-216ENST00000534070 GPATCH3Q96I76 525 aa8.51□□□□□ -1.05
CHEK1-216ENST00000534070 NOM1Q5C9Z4 860 aaKnown RBP8.51□□□□□ -1.05
CHEK1-216ENST00000534070 SMYD5Q6GMV2 418 aa8.51□□□□□ -1.05
CHEK1-216ENST00000534070 FAM43BQ6ZT52 329 aaPredicted RBP8.51□□□□□ -1.05
CHEK1-216ENST00000534070 GDPD2Q9HCC8 539 aa8.51□□□□□ -1.05
CHEK1-216ENST00000534070 KCNA1Q09470 495 aa8.5□□□□□ -1.05
CHEK1-216ENST00000534070 KDM5BQ9UGL1 1544 aa8.5□□□□□ -1.05
CHEK1-216ENST00000534070 TPD52L2O43399 206 aaKnown RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 CDCA8Q53HL2 280 aa8.49□□□□□ -1.05
CHEK1-216ENST00000534070 GLMNQ92990 594 aa8.49□□□□□ -1.05
CHEK1-216ENST00000534070 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 ADCY10Q96PN6 1610 aa8.49□□□□□ -1.05
CHEK1-216ENST00000534070 RBM47A0AV96 593 aaKnown RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 MAP4K4O95819 1239 aaPredicted RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 FECHP22830 423 aa8.49□□□□□ -1.05
CHEK1-216ENST00000534070 TAGLNQ01995 201 aaKnown RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 RYDENQ9NUL5 291 aaKnown RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 KIF21BO75037 1637 aa8.49□□□□□ -1.05
CHEK1-216ENST00000534070 ZNF16P17020 682 aaPredicted RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 DNAJC2Q99543 621 aaKnown RBP8.49□□□□□ -1.05
CHEK1-216ENST00000534070 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
CHEK1-216ENST00000534070 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
CHEK1-216ENST00000534070 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHEK1-216ENST00000534070 CEP170Q5SW79 1584 aa8.47□□□□□ -1.05
CHEK1-216ENST00000534070 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
CHEK1-216ENST00000534070 PYGBP11216 843 aa8.47□□□□□ -1.05
CHEK1-216ENST00000534070 APBB1IPQ7Z5R6 666 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms