RNA–Protein interactions for RNA: ENST00000534055.1

AP001360.1-201, humanhuman

TSL 2 BASIC

Gene AP001360.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001360.1-201ENST00000534055 ATP7AQ04656 1500 aa16.59■□□□□ 0.25
AP001360.1-201ENST00000534055 UGGT1Q9NYU2 1555 aa16.59■□□□□ 0.25
AP001360.1-201ENST00000534055 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.24
AP001360.1-201ENST00000534055 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.24
AP001360.1-201ENST00000534055 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
AP001360.1-201ENST00000534055 SYCP2Q9BX26 1530 aa16.55■□□□□ 0.24
AP001360.1-201ENST00000534055 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
AP001360.1-201ENST00000534055 ROBO1Q9Y6N7 1651 aa16.54■□□□□ 0.24
AP001360.1-201ENST00000534055 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
AP001360.1-201ENST00000534055 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
AP001360.1-201ENST00000534055 NLRP1Q9C000 1473 aa16.53■□□□□ 0.24
AP001360.1-201ENST00000534055 PZPP20742 1482 aa16.52■□□□□ 0.23
AP001360.1-201ENST00000534055 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
AP001360.1-201ENST00000534055 JCADQ9P266 1359 aa16.51■□□□□ 0.23
AP001360.1-201ENST00000534055 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
AP001360.1-201ENST00000534055 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
AP001360.1-201ENST00000534055 RXRBP28702 533 aa16.49■□□□□ 0.23
AP001360.1-201ENST00000534055 CDC42BPAQ5VT25 1732 aa16.49■□□□□ 0.23
AP001360.1-201ENST00000534055 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
AP001360.1-201ENST00000534055 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
AP001360.1-201ENST00000534055 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.23
AP001360.1-201ENST00000534055 KDM5DQ9BY66 1539 aa16.46■□□□□ 0.23
AP001360.1-201ENST00000534055 PHLPP1O60346 1717 aa16.46■□□□□ 0.23
AP001360.1-201ENST00000534055 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
AP001360.1-201ENST00000534055 FOXD1Q16676 465 aa16.44■□□□□ 0.22
AP001360.1-201ENST00000534055 LRRIQ1Q96JM4 1722 aa16.43■□□□□ 0.22
AP001360.1-201ENST00000534055 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
AP001360.1-201ENST00000534055 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
AP001360.1-201ENST00000534055 LRP6O75581 1613 aa16.43■□□□□ 0.22
AP001360.1-201ENST00000534055 WASHC2CQ9Y4E1 1318 aa16.43■□□□□ 0.22
AP001360.1-201ENST00000534055 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
AP001360.1-201ENST00000534055 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
AP001360.1-201ENST00000534055 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
AP001360.1-201ENST00000534055 PLEKHH2Q8IVE3 1493 aa16.4■□□□□ 0.22
AP001360.1-201ENST00000534055 SPATA31A6Q5VVP1 1343 aa16.4■□□□□ 0.22
AP001360.1-201ENST00000534055 KIF3BO15066 747 aa16.39■□□□□ 0.21
AP001360.1-201ENST00000534055 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
AP001360.1-201ENST00000534055 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
AP001360.1-201ENST00000534055 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
AP001360.1-201ENST00000534055 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
AP001360.1-201ENST00000534055 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
AP001360.1-201ENST00000534055 SRCAPQ6ZRS2 3230 aa16.38■□□□□ 0.21
AP001360.1-201ENST00000534055 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
AP001360.1-201ENST00000534055 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
AP001360.1-201ENST00000534055 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
AP001360.1-201ENST00000534055 CCDC18Q5T9S5 1454 aa16.35■□□□□ 0.21
AP001360.1-201ENST00000534055 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
AP001360.1-201ENST00000534055 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
AP001360.1-201ENST00000534055 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
AP001360.1-201ENST00000534055 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
AP001360.1-201ENST00000534055 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
AP001360.1-201ENST00000534055 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
AP001360.1-201ENST00000534055 ARHGAP35Q9NRY4 1499 aa16.34■□□□□ 0.21
AP001360.1-201ENST00000534055 MSH6P52701 1360 aa16.33■□□□□ 0.2
AP001360.1-201ENST00000534055 RGS12O14924 1447 aa16.33■□□□□ 0.2
AP001360.1-201ENST00000534055 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
AP001360.1-201ENST00000534055 LTKP29376 864 aa16.32■□□□□ 0.2
AP001360.1-201ENST00000534055 EEA1Q15075 1411 aa16.31■□□□□ 0.2
AP001360.1-201ENST00000534055 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
AP001360.1-201ENST00000534055 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
AP001360.1-201ENST00000534055 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
AP001360.1-201ENST00000534055 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
AP001360.1-201ENST00000534055 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
AP001360.1-201ENST00000534055 AFF2P51816 1311 aa16.29■□□□□ 0.2
AP001360.1-201ENST00000534055 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
AP001360.1-201ENST00000534055 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
AP001360.1-201ENST00000534055 KCNA6P17658 529 aa16.27■□□□□ 0.2
AP001360.1-201ENST00000534055 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
AP001360.1-201ENST00000534055 ERVK-7P63135 1459 aa16.27■□□□□ 0.19
AP001360.1-201ENST00000534055 SHPRHQ149N8 1683 aa16.27■□□□□ 0.19
AP001360.1-201ENST00000534055 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
AP001360.1-201ENST00000534055 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
AP001360.1-201ENST00000534055 SLIT1O75093 1534 aa16.26■□□□□ 0.19
AP001360.1-201ENST00000534055 ARHGAP23Q9P227 1491 aa16.26■□□□□ 0.19
AP001360.1-201ENST00000534055 NCOA2Q15596 1464 aa16.25■□□□□ 0.19
AP001360.1-201ENST00000534055 RBM6P78332 1123 aaKnown RBP16.25■□□□□ 0.19
AP001360.1-201ENST00000534055 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
AP001360.1-201ENST00000534055 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
AP001360.1-201ENST00000534055 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
AP001360.1-201ENST00000534055 ZNF644Q9H582 1327 aaPredicted RBP16.2■□□□□ 0.18
AP001360.1-201ENST00000534055 ABCC3O15438 1527 aa16.2■□□□□ 0.18
AP001360.1-201ENST00000534055 C8orf37Q96NL8 207 aa16.2■□□□□ 0.18
AP001360.1-201ENST00000534055 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
AP001360.1-201ENST00000534055 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
AP001360.1-201ENST00000534055 AHDC1Q5TGY3 1603 aaPredicted RBP16.19■□□□□ 0.18
AP001360.1-201ENST00000534055 NGLY1Q96IV0 654 aa16.18■□□□□ 0.18
AP001360.1-201ENST00000534055 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
AP001360.1-201ENST00000534055 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
AP001360.1-201ENST00000534055 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
AP001360.1-201ENST00000534055 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
AP001360.1-201ENST00000534055 TMEM2Q9UHN6 1383 aa16.16■□□□□ 0.18
AP001360.1-201ENST00000534055 BCANQ96GW7 911 aa16.15■□□□□ 0.18
AP001360.1-201ENST00000534055 LRP5O75197 1615 aa16.14■□□□□ 0.17
AP001360.1-201ENST00000534055 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
AP001360.1-201ENST00000534055 CFAP65Q6ZU64 1925 aaKnown RBP16.13■□□□□ 0.17
AP001360.1-201ENST00000534055 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
AP001360.1-201ENST00000534055 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
AP001360.1-201ENST00000534055 CCDC125Q86Z20 511 aa16.11■□□□□ 0.17
AP001360.1-201ENST00000534055 PIK3C2BO00750 1634 aa16.11■□□□□ 0.17
AP001360.1-201ENST00000534055 CEP152O94986 1710 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms