RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
SOX9-AS1-213ENST00000533996 PLXNC1O60486 1568 aa15.35■□□□□ 0.05
SOX9-AS1-213ENST00000533996 A2ML1A8K2U0 1454 aa15.34■□□□□ 0.05
SOX9-AS1-213ENST00000533996 DNMT1P26358 1616 aaKnown RBP15.34■□□□□ 0.05
SOX9-AS1-213ENST00000533996 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
SOX9-AS1-213ENST00000533996 A2MP01023 1474 aa15.33■□□□□ 0.05
SOX9-AS1-213ENST00000533996 ATP7AQ04656 1500 aa15.33■□□□□ 0.05
SOX9-AS1-213ENST00000533996 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
SOX9-AS1-213ENST00000533996 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
SOX9-AS1-213ENST00000533996 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
SOX9-AS1-213ENST00000533996 GGT6Q6P531 493 aa15.31■□□□□ 0.04
SOX9-AS1-213ENST00000533996 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
SOX9-AS1-213ENST00000533996 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
SOX9-AS1-213ENST00000533996 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
SOX9-AS1-213ENST00000533996 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
SOX9-AS1-213ENST00000533996 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
SOX9-AS1-213ENST00000533996 PLEKHH2Q8IVE3 1493 aa15.3■□□□□ 0.04
SOX9-AS1-213ENST00000533996 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
SOX9-AS1-213ENST00000533996 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
SOX9-AS1-213ENST00000533996 NEURL4Q96JN8 1562 aa15.28■□□□□ 0.04
SOX9-AS1-213ENST00000533996 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
SOX9-AS1-213ENST00000533996 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
SOX9-AS1-213ENST00000533996 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
SOX9-AS1-213ENST00000533996 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
SOX9-AS1-213ENST00000533996 THEMISQ8N1K5 641 aaPredicted RBP15.24■□□□□ 0.03
SOX9-AS1-213ENST00000533996 MED14O60244 1454 aa15.24■□□□□ 0.03
SOX9-AS1-213ENST00000533996 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
SOX9-AS1-213ENST00000533996 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
SOX9-AS1-213ENST00000533996 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
SOX9-AS1-213ENST00000533996 ALKQ9UM73 1620 aa15.23■□□□□ 0.03
SOX9-AS1-213ENST00000533996 TNRQ92752 1358 aa15.22■□□□□ 0.03
SOX9-AS1-213ENST00000533996 FYCO1Q9BQS8 1478 aa15.21■□□□□ 0.03
SOX9-AS1-213ENST00000533996 RTEL1-TNFRSF6BF6WH68 1400 aa15.21■□□□□ 0.03
SOX9-AS1-213ENST00000533996 PZPP20742 1482 aa15.2■□□□□ 0.02
SOX9-AS1-213ENST00000533996 DHX29Q7Z478 1369 aaKnown RBP15.2■□□□□ 0.02
SOX9-AS1-213ENST00000533996 NLRP1Q9C000 1473 aa15.2■□□□□ 0.02
SOX9-AS1-213ENST00000533996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
SOX9-AS1-213ENST00000533996 NPHP4O75161 1426 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-213ENST00000533996 CCNB3Q8WWL7 1395 aa15.18■□□□□ 0.02
SOX9-AS1-213ENST00000533996 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 SYNMO15061 1565 aa15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
SOX9-AS1-213ENST00000533996 LRRC7Q96NW7 1537 aa15.16■□□□□ 0.02
SOX9-AS1-213ENST00000533996 APLP2Q06481 763 aa15.15■□□□□ 0.02
SOX9-AS1-213ENST00000533996 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
SOX9-AS1-213ENST00000533996 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
SOX9-AS1-213ENST00000533996 STRCP1A6NGW2 1772 aa15.14■□□□□ 0.01
SOX9-AS1-213ENST00000533996 WASHC2CQ9Y4E1 1318 aa15.14■□□□□ 0.01
SOX9-AS1-213ENST00000533996 KIF3BO15066 747 aa15.13■□□□□ 0.01
SOX9-AS1-213ENST00000533996 RSPH4AQ5TD94 716 aa15.11■□□□□ 0.01
SOX9-AS1-213ENST00000533996 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
SOX9-AS1-213ENST00000533996 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
SOX9-AS1-213ENST00000533996 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
SOX9-AS1-213ENST00000533996 TIAM1Q13009 1591 aa15.07■□□□□ 0
SOX9-AS1-213ENST00000533996 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
SOX9-AS1-213ENST00000533996 FAM135BQ49AJ0 1406 aa15.06■□□□□ 0
SOX9-AS1-213ENST00000533996 CCDC141Q6ZP82 1450 aa15.05■□□□□ -0
SOX9-AS1-213ENST00000533996 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ -0
SOX9-AS1-213ENST00000533996 POTEAQ6S8J7 498 aa15.03■□□□□ -0
SOX9-AS1-213ENST00000533996 UBR1Q8IWV7 1749 aa15.02□□□□□ -0.01
SOX9-AS1-213ENST00000533996 EHBP1L1Q8N3D4 1523 aa15.02□□□□□ -0.01
SOX9-AS1-213ENST00000533996 CEP162Q5TB80 1403 aa15.01□□□□□ -0.01
SOX9-AS1-213ENST00000533996 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
SOX9-AS1-213ENST00000533996 TSPY4P0CV99 314 aa15□□□□□ -0.01
SOX9-AS1-213ENST00000533996 TSPY10P0CW01 314 aa15□□□□□ -0.01
SOX9-AS1-213ENST00000533996 RNF39Q9H2S5 420 aa15□□□□□ -0.01
SOX9-AS1-213ENST00000533996 ERVK-7P63135 1459 aa14.99□□□□□ -0.01
SOX9-AS1-213ENST00000533996 ARHGEF5Q12774 1597 aa14.98□□□□□ -0.01
SOX9-AS1-213ENST00000533996 ABCC3O15438 1527 aa14.98□□□□□ -0.01
SOX9-AS1-213ENST00000533996 SLIT1O75093 1534 aa14.98□□□□□ -0.01
SOX9-AS1-213ENST00000533996 ARHGAP23Q9P227 1491 aa14.98□□□□□ -0.01
SOX9-AS1-213ENST00000533996 CAMSAP2Q08AD1 1489 aa14.97□□□□□ -0.01
SOX9-AS1-213ENST00000533996 EIF2AK4Q9P2K8 1649 aaKnown RBP14.97□□□□□ -0.01
SOX9-AS1-213ENST00000533996 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
SOX9-AS1-213ENST00000533996 LTKP29376 864 aa14.96□□□□□ -0.01
SOX9-AS1-213ENST00000533996 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
SOX9-AS1-213ENST00000533996 CFAP65Q6ZU64 1925 aaKnown RBP14.96□□□□□ -0.02
SOX9-AS1-213ENST00000533996 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SOX9-AS1-213ENST00000533996 ROBO1Q9Y6N7 1651 aa14.95□□□□□ -0.02
SOX9-AS1-213ENST00000533996 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
SOX9-AS1-213ENST00000533996 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
SOX9-AS1-213ENST00000533996 SETD1AO15047 1707 aaKnown RBP14.91□□□□□ -0.02
SOX9-AS1-213ENST00000533996 CEP152O94986 1710 aa14.91□□□□□ -0.02
SOX9-AS1-213ENST00000533996 ARHGAP31Q2M1Z3 1444 aa14.91□□□□□ -0.02
SOX9-AS1-213ENST00000533996 KDM5AP29375 1690 aaKnown RBP14.9□□□□□ -0.02
SOX9-AS1-213ENST00000533996 TMEM94Q12767 1356 aa14.9□□□□□ -0.02
SOX9-AS1-213ENST00000533996 KCNA6P17658 529 aa14.9□□□□□ -0.02
SOX9-AS1-213ENST00000533996 MROH1Q8NDA8 1641 aa14.89□□□□□ -0.03
SOX9-AS1-213ENST00000533996 JCADQ9P266 1359 aa14.88□□□□□ -0.03
SOX9-AS1-213ENST00000533996 TMEM2Q9UHN6 1383 aa14.88□□□□□ -0.03
SOX9-AS1-213ENST00000533996 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
SOX9-AS1-213ENST00000533996 PHLPP1O60346 1717 aa14.88□□□□□ -0.03
SOX9-AS1-213ENST00000533996 MAP3K1Q13233 1512 aa14.87□□□□□ -0.03
SOX9-AS1-213ENST00000533996 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
SOX9-AS1-213ENST00000533996 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.03
SOX9-AS1-213ENST00000533996 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms