RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 PRDM15P57071 1507 aaPredicted RBP23.41■■□□□ 1.34
CTTN-215ENST00000533931 ADAMTSL3P82987 1691 aa23.39■■□□□ 1.34
CTTN-215ENST00000533931 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
CTTN-215ENST00000533931 MROH1Q8NDA8 1641 aa23.38■■□□□ 1.33
CTTN-215ENST00000533931 SETD5Q9C0A6 1442 aa23.38■■□□□ 1.33
CTTN-215ENST00000533931 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
CTTN-215ENST00000533931 UNC13BO14795 1591 aa23.38■■□□□ 1.33
CTTN-215ENST00000533931 HRCP23327 699 aa23.34■■□□□ 1.33
CTTN-215ENST00000533931 KANK1Q14678 1352 aa23.34■■□□□ 1.33
CTTN-215ENST00000533931 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
CTTN-215ENST00000533931 ZC3H13Q5T200 1668 aaKnown RBP23.34■■□□□ 1.33
CTTN-215ENST00000533931 GGT6Q6P531 493 aa23.33■■□□□ 1.33
CTTN-215ENST00000533931 LMTK2Q8IWU2 1503 aa23.32■■□□□ 1.32
CTTN-215ENST00000533931 MLECQ14165 292 aa23.3■■□□□ 1.32
CTTN-215ENST00000533931 MADDQ8WXG6 1647 aa23.3■■□□□ 1.32
CTTN-215ENST00000533931 ABCC3O15438 1527 aa23.29■■□□□ 1.32
CTTN-215ENST00000533931 MROH2AA6NES4 1674 aa23.29■■□□□ 1.32
CTTN-215ENST00000533931 ESF1Q9H501 851 aaKnown RBP23.29■■□□□ 1.32
CTTN-215ENST00000533931 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
CTTN-215ENST00000533931 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
CTTN-215ENST00000533931 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.32
CTTN-215ENST00000533931 IQGAP3Q86VI3 1631 aa23.26■■□□□ 1.31
CTTN-215ENST00000533931 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
CTTN-215ENST00000533931 NUP155O75694 1391 aa23.24■■□□□ 1.31
CTTN-215ENST00000533931 ARHGAP31Q2M1Z3 1444 aa23.24■■□□□ 1.31
CTTN-215ENST00000533931 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
CTTN-215ENST00000533931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.312e-7■□□□□ 11.2
CTTN-215ENST00000533931 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
CTTN-215ENST00000533931 TET3O43151 1660 aa23.2■■□□□ 1.3
CTTN-215ENST00000533931 EFCAB6Q5THR3 1501 aa23.2■■□□□ 1.3
CTTN-215ENST00000533931 PTPRMP28827 1452 aa23.2■■□□□ 1.3
CTTN-215ENST00000533931 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
CTTN-215ENST00000533931 PZPP20742 1482 aa23.19■■□□□ 1.3
CTTN-215ENST00000533931 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
CTTN-215ENST00000533931 ZMYM3Q14202 1370 aa23.19■■□□□ 1.3
CTTN-215ENST00000533931 CEP152O94986 1710 aa23.17■■□□□ 1.3
CTTN-215ENST00000533931 NPATQ14207 1427 aa23.16■■□□□ 1.3
CTTN-215ENST00000533931 C3P01024 1663 aa23.14■■□□□ 1.29
CTTN-215ENST00000533931 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
CTTN-215ENST00000533931 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
CTTN-215ENST00000533931 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
CTTN-215ENST00000533931 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
CTTN-215ENST00000533931 ERVK-7P63135 1459 aa23.08■■□□□ 1.29
CTTN-215ENST00000533931 MPHOSPH9Q99550 1183 aa23.07■■□□□ 1.28
CTTN-215ENST00000533931 NOS1P29475 1434 aa23.07■■□□□ 1.28
CTTN-215ENST00000533931 E9PCH4 1651 aa23.06■■□□□ 1.28
CTTN-215ENST00000533931 PREX1Q8TCU6 1659 aa23.04■■□□□ 1.28
CTTN-215ENST00000533931 PTPRTO14522 1441 aa23.03■■□□□ 1.28
CTTN-215ENST00000533931 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
CTTN-215ENST00000533931 PKD2Q13563 968 aa23.03■■□□□ 1.28
CTTN-215ENST00000533931 TNRQ92752 1358 aa23.01■■□□□ 1.27
CTTN-215ENST00000533931 NLRP1Q9C000 1473 aa23■■□□□ 1.27
CTTN-215ENST00000533931 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
CTTN-215ENST00000533931 TRPM2O94759 1503 aa22.98■■□□□ 1.27
CTTN-215ENST00000533931 SLC52A1Q9NWF4 448 aa22.97■■□□□ 1.27
CTTN-215ENST00000533931 SYNMO15061 1565 aa22.97■■□□□ 1.27
CTTN-215ENST00000533931 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
CTTN-215ENST00000533931 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
CTTN-215ENST00000533931 MYO3AQ8NEV4 1616 aa22.95■■□□□ 1.26
CTTN-215ENST00000533931 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
CTTN-215ENST00000533931 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
CTTN-215ENST00000533931 PLA2R1Q13018 1463 aa22.93■■□□□ 1.26
CTTN-215ENST00000533931 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
CTTN-215ENST00000533931 DHX57Q6P158 1386 aaKnown RBP22.92■■□□□ 1.26
CTTN-215ENST00000533931 ZNF142P52746 1687 aaPredicted RBP22.92■■□□□ 1.26
CTTN-215ENST00000533931 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
CTTN-215ENST00000533931 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
CTTN-215ENST00000533931 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
CTTN-215ENST00000533931 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.26
CTTN-215ENST00000533931 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.26
CTTN-215ENST00000533931 CCDC144AA2RUR9 1427 aa22.87■■□□□ 1.25
CTTN-215ENST00000533931 IDI1Q13907 227 aa22.86■■□□□ 1.25
CTTN-215ENST00000533931 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
CTTN-215ENST00000533931 FOXD1Q16676 465 aa22.85■■□□□ 1.25
CTTN-215ENST00000533931 ADGRB3O60242 1522 aa22.85■■□□□ 1.25
CTTN-215ENST00000533931 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
CTTN-215ENST00000533931 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
CTTN-215ENST00000533931 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
CTTN-215ENST00000533931 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
CTTN-215ENST00000533931 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
CTTN-215ENST00000533931 UBR1Q8IWV7 1749 aa22.8■■□□□ 1.24
CTTN-215ENST00000533931 TMEM131LA2VDJ0 1609 aa22.8■■□□□ 1.24
CTTN-215ENST00000533931 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
CTTN-215ENST00000533931 SLIT1O75093 1534 aa22.77■■□□□ 1.24
CTTN-215ENST00000533931 ARHGAP23Q9P227 1491 aa22.76■■□□□ 1.23
CTTN-215ENST00000533931 SPATA31E1Q6ZUB1 1445 aa22.75■■□□□ 1.23
CTTN-215ENST00000533931 STAG3Q9UJ98 1225 aa22.75■■□□□ 1.23
CTTN-215ENST00000533931 KIF1BO60333 1816 aa22.74■■□□□ 1.23
CTTN-215ENST00000533931 TMEM2Q9UHN6 1383 aa22.73■■□□□ 1.23
CTTN-215ENST00000533931 RPGRIP1LQ68CZ1 1315 aa22.71■■□□□ 1.23
CTTN-215ENST00000533931 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
CTTN-215ENST00000533931 HDGFP51858 240 aaKnown RBP22.69■■□□□ 1.22
CTTN-215ENST00000533931 CHGAP10645 457 aaKnown RBP22.67■■□□□ 1.22
CTTN-215ENST00000533931 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.67■■□□□ 1.22
CTTN-215ENST00000533931 SCAF11Q99590 1463 aaKnown RBP22.66■■□□□ 1.22
CTTN-215ENST00000533931 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
CTTN-215ENST00000533931 ANKLE2Q86XL3 938 aa22.65■■□□□ 1.22
CTTN-215ENST00000533931 STAC3Q96MF2 364 aa22.65■■□□□ 1.22
CTTN-215ENST00000533931 EID1Q9Y6B2 187 aa22.65■■□□□ 1.22
CTTN-215ENST00000533931 NEXMIFQ5QGS0 1516 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms