RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 KANK1Q14678 1352 aa21.05■□□□□ 0.96
CMTM1-218ENST00000533915 RNF17Q9BXT8 1623 aaKnown RBP21.04■□□□□ 0.96
CMTM1-218ENST00000533915 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
CMTM1-218ENST00000533915 SETD5Q9C0A6 1442 aa21.02■□□□□ 0.96
CMTM1-218ENST00000533915 CNTLNQ9NXG0 1405 aa21.02■□□□□ 0.96
CMTM1-218ENST00000533915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
CMTM1-218ENST00000533915 WASHC2CQ9Y4E1 1318 aa21.01■□□□□ 0.95
CMTM1-218ENST00000533915 ADAMTSL3P82987 1691 aa20.99■□□□□ 0.95
CMTM1-218ENST00000533915 FER1L4A9Z1Z3 1794 aa20.99■□□□□ 0.95
CMTM1-218ENST00000533915 DEPDC5O75140 1603 aa20.99■□□□□ 0.95
CMTM1-218ENST00000533915 PRDM15P57071 1507 aaPredicted RBP20.97■□□□□ 0.95
CMTM1-218ENST00000533915 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
CMTM1-218ENST00000533915 HRCP23327 699 aa20.95■□□□□ 0.94
CMTM1-218ENST00000533915 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
CMTM1-218ENST00000533915 ZC3H13Q5T200 1668 aaKnown RBP20.95■□□□□ 0.94
CMTM1-218ENST00000533915 UNC13BO14795 1591 aa20.94■□□□□ 0.94
CMTM1-218ENST00000533915 TRIM52Q96A61 297 aa20.94■□□□□ 0.94
CMTM1-218ENST00000533915 NUP155O75694 1391 aa20.94■□□□□ 0.94
CMTM1-218ENST00000533915 KDM4FA0A1W2PPD8 638 aa20.93■□□□□ 0.94
CMTM1-218ENST00000533915 MROH1Q8NDA8 1641 aa20.93■□□□□ 0.94
CMTM1-218ENST00000533915 RAB3GAP2Q9H2M9 1393 aa20.92■□□□□ 0.94
CMTM1-218ENST00000533915 MROH2AA6NES4 1674 aa20.91■□□□□ 0.94
CMTM1-218ENST00000533915 CLTCQ00610 1675 aaKnown RBP20.91■□□□□ 0.94
CMTM1-218ENST00000533915 RIMS1Q86UR5 1692 aaKnown RBP20.91■□□□□ 0.94
CMTM1-218ENST00000533915 ABCC3O15438 1527 aa20.9■□□□□ 0.94
CMTM1-218ENST00000533915 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.93
CMTM1-218ENST00000533915 ZMYM3Q14202 1370 aa20.88■□□□□ 0.93
CMTM1-218ENST00000533915 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
CMTM1-218ENST00000533915 IQGAP3Q86VI3 1631 aa20.87■□□□□ 0.93
CMTM1-218ENST00000533915 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
CMTM1-218ENST00000533915 PTPRMP28827 1452 aa20.87■□□□□ 0.93
CMTM1-218ENST00000533915 CEP152O94986 1710 aa20.87■□□□□ 0.93
CMTM1-218ENST00000533915 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
CMTM1-218ENST00000533915 ARHGAP31Q2M1Z3 1444 aa20.84■□□□□ 0.93
CMTM1-218ENST00000533915 TET3O43151 1660 aa20.83■□□□□ 0.93
CMTM1-218ENST00000533915 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
CMTM1-218ENST00000533915 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
CMTM1-218ENST00000533915 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
CMTM1-218ENST00000533915 PZPP20742 1482 aa20.81■□□□□ 0.92
CMTM1-218ENST00000533915 C3P01024 1663 aa20.81■□□□□ 0.92
CMTM1-218ENST00000533915 EFCAB6Q5THR3 1501 aa20.81■□□□□ 0.92
CMTM1-218ENST00000533915 RPRD2Q5VT52 1461 aaKnown RBP20.81■□□□□ 0.92
CMTM1-218ENST00000533915 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
CMTM1-218ENST00000533915 NPATQ14207 1427 aa20.79■□□□□ 0.92
CMTM1-218ENST00000533915 CEBPAP49715 358 aaPredicted RBP20.79■□□□□ 0.92
CMTM1-218ENST00000533915 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
CMTM1-218ENST00000533915 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
CMTM1-218ENST00000533915 PKD2Q13563 968 aa20.75■□□□□ 0.91
CMTM1-218ENST00000533915 FBXO31Q5XUX0 539 aaPredicted RBP20.73■□□□□ 0.91
CMTM1-218ENST00000533915 TNRQ92752 1358 aa20.72■□□□□ 0.91
CMTM1-218ENST00000533915 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
CMTM1-218ENST00000533915 E9PCH4 1651 aa20.72■□□□□ 0.91
CMTM1-218ENST00000533915 PREX1Q8TCU6 1659 aa20.71■□□□□ 0.91
CMTM1-218ENST00000533915 SPATA31D1Q6ZQQ2 1576 aa20.71■□□□□ 0.91
CMTM1-218ENST00000533915 SLC52A1Q9NWF4 448 aa20.69■□□□□ 0.9
CMTM1-218ENST00000533915 NOS1P29475 1434 aa20.68■□□□□ 0.9
CMTM1-218ENST00000533915 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
CMTM1-218ENST00000533915 NLRP1Q9C000 1473 aa20.66■□□□□ 0.9
CMTM1-218ENST00000533915 SPHKAPQ2M3C7 1700 aa20.65■□□□□ 0.9
CMTM1-218ENST00000533915 PTPRTO14522 1441 aa20.64■□□□□ 0.89
CMTM1-218ENST00000533915 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
CMTM1-218ENST00000533915 MYO3AQ8NEV4 1616 aa20.61■□□□□ 0.89
CMTM1-218ENST00000533915 FOXD1Q16676 465 aa20.61■□□□□ 0.89
CMTM1-218ENST00000533915 TRPM2O94759 1503 aa20.61■□□□□ 0.89
CMTM1-218ENST00000533915 SYNMO15061 1565 aa20.6■□□□□ 0.89
CMTM1-218ENST00000533915 A2ML1A8K2U0 1454 aa20.6■□□□□ 0.89
CMTM1-218ENST00000533915 CCDC144AA2RUR9 1427 aa20.59■□□□□ 0.89
CMTM1-218ENST00000533915 IDI1Q13907 227 aa20.58■□□□□ 0.89
CMTM1-218ENST00000533915 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
CMTM1-218ENST00000533915 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
CMTM1-218ENST00000533915 ZNF142P52746 1687 aaPredicted RBP20.57■□□□□ 0.88
CMTM1-218ENST00000533915 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
CMTM1-218ENST00000533915 PIK3C2BO00750 1634 aa20.55■□□□□ 0.88
CMTM1-218ENST00000533915 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
CMTM1-218ENST00000533915 PLA2R1Q13018 1463 aa20.55■□□□□ 0.88
CMTM1-218ENST00000533915 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
CMTM1-218ENST00000533915 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
CMTM1-218ENST00000533915 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
CMTM1-218ENST00000533915 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
CMTM1-218ENST00000533915 KIF1BO60333 1816 aa20.52■□□□□ 0.88
CMTM1-218ENST00000533915 HDGFP51858 240 aaKnown RBP20.51■□□□□ 0.87
CMTM1-218ENST00000533915 CLTCL1P53675 1640 aa20.51■□□□□ 0.87
CMTM1-218ENST00000533915 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
CMTM1-218ENST00000533915 UBR1Q8IWV7 1749 aa20.49■□□□□ 0.87
CMTM1-218ENST00000533915 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
CMTM1-218ENST00000533915 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
CMTM1-218ENST00000533915 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
CMTM1-218ENST00000533915 CLSPNQ9HAW4 1339 aa20.47■□□□□ 0.87
CMTM1-218ENST00000533915 TMEM131LA2VDJ0 1609 aa20.46■□□□□ 0.87
CMTM1-218ENST00000533915 ANKLE2Q86XL3 938 aa20.45■□□□□ 0.86
CMTM1-218ENST00000533915 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
CMTM1-218ENST00000533915 HSPA2P54652 639 aa20.44■□□□□ 0.86
CMTM1-218ENST00000533915 RPGRIP1LQ68CZ1 1315 aa20.44■□□□□ 0.86
CMTM1-218ENST00000533915 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
CMTM1-218ENST00000533915 NEURL4Q96JN8 1562 aa20.43■□□□□ 0.86
CMTM1-218ENST00000533915 MYO5BQ9ULV0 1848 aa20.42■□□□□ 0.86
CMTM1-218ENST00000533915 SLIT1O75093 1534 aa20.42■□□□□ 0.86
CMTM1-218ENST00000533915 PPP1R15AO75807 674 aaPredicted RBP20.4■□□□□ 0.86
CMTM1-218ENST00000533915 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
CMTM1-218ENST00000533915 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms