RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
CHKA-207ENST00000533728 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
CHKA-207ENST00000533728 VWDEQ8N2E2 1590 aa14.12□□□□□ -0.15
CHKA-207ENST00000533728 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
CHKA-207ENST00000533728 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
CHKA-207ENST00000533728 CNTLNQ9NXG0 1405 aa14.1□□□□□ -0.15
CHKA-207ENST00000533728 AGLP35573 1532 aa14.09□□□□□ -0.15
CHKA-207ENST00000533728 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.15
CHKA-207ENST00000533728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHKA-207ENST00000533728 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
CHKA-207ENST00000533728 SCAPERQ9BY12 1400 aa14.07□□□□□ -0.16
CHKA-207ENST00000533728 MYO5CQ9NQX4 1742 aa14.07□□□□□ -0.16
CHKA-207ENST00000533728 PLEKHD1A6NEE1 506 aa14.07□□□□□ -0.16
CHKA-207ENST00000533728 NEURL4Q96JN8 1562 aa14.07□□□□□ -0.16
CHKA-207ENST00000533728 DNMT1P26358 1616 aaKnown RBP14.06□□□□□ -0.16
CHKA-207ENST00000533728 KIF14Q15058 1648 aa14.06□□□□□ -0.16
CHKA-207ENST00000533728 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
CHKA-207ENST00000533728 CDK11AQ9UQ88 783 aaPredicted RBP14.06□□□□□ -0.16
CHKA-207ENST00000533728 ITGAEP38570 1179 aa14.05□□□□□ -0.16
CHKA-207ENST00000533728 NAIPQ13075 1403 aa14.05□□□□□ -0.16
CHKA-207ENST00000533728 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
CHKA-207ENST00000533728 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
CHKA-207ENST00000533728 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
CHKA-207ENST00000533728 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
CHKA-207ENST00000533728 RXRBP28702 533 aa14.04□□□□□ -0.16
CHKA-207ENST00000533728 SYNMO15061 1565 aa14.04□□□□□ -0.16
CHKA-207ENST00000533728 ADGBQ8N7X0 1667 aa14.03□□□□□ -0.16
CHKA-207ENST00000533728 STRCP1A6NGW2 1772 aa14.03□□□□□ -0.16
CHKA-207ENST00000533728 LRP5O75197 1615 aa14.02□□□□□ -0.16
CHKA-207ENST00000533728 DIP2CQ9Y2E4 1556 aa14.02□□□□□ -0.16
CHKA-207ENST00000533728 PREX2Q70Z35 1606 aa14.01□□□□□ -0.17
CHKA-207ENST00000533728 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
CHKA-207ENST00000533728 FAM135BQ49AJ0 1406 aa14□□□□□ -0.17
CHKA-207ENST00000533728 ROCK1Q13464 1354 aa14□□□□□ -0.17
CHKA-207ENST00000533728 ZMYM3Q14202 1370 aa13.99□□□□□ -0.17
CHKA-207ENST00000533728 YY1P25490 414 aa13.99□□□□□ -0.17
CHKA-207ENST00000533728 PLCH2O75038 1416 aa13.98□□□□□ -0.17
CHKA-207ENST00000533728 MYT1LQ9UL68 1186 aa13.97□□□□□ -0.17
CHKA-207ENST00000533728 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
CHKA-207ENST00000533728 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
CHKA-207ENST00000533728 DAPK1P53355 1430 aa13.95□□□□□ -0.18
CHKA-207ENST00000533728 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
CHKA-207ENST00000533728 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
CHKA-207ENST00000533728 SENP3-EIF4A1A0A087X0R7 540 aa13.94□□□□□ -0.18
CHKA-207ENST00000533728 JCADQ9P266 1359 aa13.94□□□□□ -0.18
CHKA-207ENST00000533728 EP400Q96L91 3159 aa13.93□□□□□ -0.18
CHKA-207ENST00000533728 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
CHKA-207ENST00000533728 KDM5CP41229 1560 aa13.93□□□□□ -0.18
CHKA-207ENST00000533728 NUTM2BA6NNL0 878 aaPredicted RBP13.92□□□□□ -0.18
CHKA-207ENST00000533728 NUTM2EB1AL46 878 aaPredicted RBP13.92□□□□□ -0.18
CHKA-207ENST00000533728 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
CHKA-207ENST00000533728 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
CHKA-207ENST00000533728 ADGRL2O95490 1459 aa13.92□□□□□ -0.18
CHKA-207ENST00000533728 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
CHKA-207ENST00000533728 RGS12O14924 1447 aa13.91□□□□□ -0.18
CHKA-207ENST00000533728 GPATCH8Q9UKJ3 1502 aaKnown RBP13.91□□□□□ -0.18
CHKA-207ENST00000533728 LRP6O75581 1613 aa13.91□□□□□ -0.18
CHKA-207ENST00000533728 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
CHKA-207ENST00000533728 ABCC5O15440 1437 aa13.9□□□□□ -0.18
CHKA-207ENST00000533728 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
CHKA-207ENST00000533728 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
CHKA-207ENST00000533728 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.19
CHKA-207ENST00000533728 IQGAP1P46940 1657 aa13.89□□□□□ -0.19
CHKA-207ENST00000533728 ANKLE2Q86XL3 938 aa13.89□□□□□ -0.19
CHKA-207ENST00000533728 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
CHKA-207ENST00000533728 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
CHKA-207ENST00000533728 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
CHKA-207ENST00000533728 ABCC1P33527 1531 aa13.88□□□□□ -0.19
CHKA-207ENST00000533728 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
CHKA-207ENST00000533728 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
CHKA-207ENST00000533728 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
CHKA-207ENST00000533728 MED14O60244 1454 aa13.87□□□□□ -0.19
CHKA-207ENST00000533728 EFCAB2Q5VUJ9 269 aa13.86□□□□□ -0.19
CHKA-207ENST00000533728 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
CHKA-207ENST00000533728 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
CHKA-207ENST00000533728 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
CHKA-207ENST00000533728 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
CHKA-207ENST00000533728 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
CHKA-207ENST00000533728 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
CHKA-207ENST00000533728 TONSLQ96HA7 1378 aa13.83□□□□□ -0.2
CHKA-207ENST00000533728 MLH3Q9UHC1 1453 aa13.82□□□□□ -0.2
CHKA-207ENST00000533728 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
CHKA-207ENST00000533728 MIER1Q8N108 512 aa13.8□□□□□ -0.2
CHKA-207ENST00000533728 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
CHKA-207ENST00000533728 MAST1Q9Y2H9 1570 aa13.79□□□□□ -0.2
CHKA-207ENST00000533728 NHSL1Q5SYE7 1610 aa13.79□□□□□ -0.2
CHKA-207ENST00000533728 KIDINS220Q9ULH0 1771 aa13.79□□□□□ -0.2
CHKA-207ENST00000533728 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
CHKA-207ENST00000533728 KDM5DQ9BY66 1539 aa13.79□□□□□ -0.2
CHKA-207ENST00000533728 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
CHKA-207ENST00000533728 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
CHKA-207ENST00000533728 MBD5Q9P267 1494 aa13.78□□□□□ -0.2
CHKA-207ENST00000533728 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
CHKA-207ENST00000533728 NEUROD1Q13562 356 aa13.77□□□□□ -0.21
CHKA-207ENST00000533728 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.21
CHKA-207ENST00000533728 INO80Q9ULG1 1556 aaPredicted RBP13.76□□□□□ -0.21
CHKA-207ENST00000533728 AFF2P51816 1311 aa13.76□□□□□ -0.21
CHKA-207ENST00000533728 RSPH4AQ5TD94 716 aa13.76□□□□□ -0.21
CHKA-207ENST00000533728 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
CHKA-207ENST00000533728 RPRD2Q5VT52 1461 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms