RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 SETD1BQ9UPS6 1966 aaKnown RBP26.67■■□□□ 1.86
NXF1-217ENST00000533671 ZMYM3Q14202 1370 aa26.67■■□□□ 1.86
NXF1-217ENST00000533671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.66■■□□□ 1.86
NXF1-217ENST00000533671 WASHC2CQ9Y4E1 1318 aa26.65■■□□□ 1.86
NXF1-217ENST00000533671 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
NXF1-217ENST00000533671 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
NXF1-217ENST00000533671 ADGRL2O95490 1459 aa26.65■■□□□ 1.86
NXF1-217ENST00000533671 RNF17Q9BXT8 1623 aaKnown RBP26.65■■□□□ 1.86
NXF1-217ENST00000533671 KDM5DQ9BY66 1539 aa26.63■■□□□ 1.85
NXF1-217ENST00000533671 PREX1Q8TCU6 1659 aa26.63■■□□□ 1.85
NXF1-217ENST00000533671 FAM135AQ9P2D6 1515 aa26.62■■□□□ 1.85
NXF1-217ENST00000533671 RRBP1Q9P2E9 1410 aaKnown RBP26.61■■□□□ 1.85
NXF1-217ENST00000533671 PTPRKQ15262 1439 aa26.59■■□□□ 1.85
NXF1-217ENST00000533671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.58■■□□□ 1.85
NXF1-217ENST00000533671 ZC3H13Q5T200 1668 aaKnown RBP26.57■■□□□ 1.84
NXF1-217ENST00000533671 LMTK3Q96Q04 1460 aa26.57■■□□□ 1.84
NXF1-217ENST00000533671 UHRF1BP1Q6BDS2 1440 aa26.56■■□□□ 1.84
NXF1-217ENST00000533671 CEP152O94986 1710 aa26.55■■□□□ 1.84
NXF1-217ENST00000533671 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
NXF1-217ENST00000533671 NPATQ14207 1427 aa26.55■■□□□ 1.84
NXF1-217ENST00000533671 KANK1Q14678 1352 aa26.54■■□□□ 1.84
NXF1-217ENST00000533671 ANKRD50Q9ULJ7 1429 aa26.54■■□□□ 1.84
NXF1-217ENST00000533671 MROH1Q8NDA8 1641 aa26.54■■□□□ 1.84
NXF1-217ENST00000533671 ABCC3O15438 1527 aa26.52■■□□□ 1.84
NXF1-217ENST00000533671 HSPA2P54652 639 aa26.51■■□□□ 1.83
NXF1-217ENST00000533671 DEPDC5O75140 1603 aa26.5■■□□□ 1.83
NXF1-217ENST00000533671 PRDM15P57071 1507 aaPredicted RBP26.5■■□□□ 1.83
NXF1-217ENST00000533671 CFAP65Q6ZU64 1925 aaKnown RBP26.5■■□□□ 1.83
NXF1-217ENST00000533671 PZPP20742 1482 aa26.48■■□□□ 1.83
NXF1-217ENST00000533671 CAMSAP1Q5T5Y3 1602 aa26.47■■□□□ 1.83
NXF1-217ENST00000533671 FBXO31Q5XUX0 539 aaPredicted RBP26.45■■□□□ 1.82
NXF1-217ENST00000533671 MYO3AQ8NEV4 1616 aa26.43■■□□□ 1.82
NXF1-217ENST00000533671 TNRQ92752 1358 aa26.42■■□□□ 1.82
NXF1-217ENST00000533671 ZNF142P52746 1687 aaPredicted RBP26.37■■□□□ 1.81
NXF1-217ENST00000533671 UNC13BO14795 1591 aa26.37■■□□□ 1.81
NXF1-217ENST00000533671 VWDEQ8N2E2 1590 aa26.37■■□□□ 1.81
NXF1-217ENST00000533671 CEP170BQ9Y4F5 1589 aaPredicted RBP26.36■■□□□ 1.81
NXF1-217ENST00000533671 ERVK-7P63135 1459 aa26.35■■□□□ 1.81
NXF1-217ENST00000533671 GCC2Q8IWJ2 1684 aa26.34■■□□□ 1.81
NXF1-217ENST00000533671 LMTK2Q8IWU2 1503 aa26.34■■□□□ 1.81
NXF1-217ENST00000533671 ARHGAP31Q2M1Z3 1444 aa26.34■■□□□ 1.81
NXF1-217ENST00000533671 SPATA31D1Q6ZQQ2 1576 aa26.33■■□□□ 1.81
NXF1-217ENST00000533671 A2ML1A8K2U0 1454 aa26.32■■□□□ 1.8
NXF1-217ENST00000533671 TET3O43151 1660 aa26.3■■□□□ 1.8
NXF1-217ENST00000533671 NUP155O75694 1391 aa26.3■■□□□ 1.8
NXF1-217ENST00000533671 NAIPQ13075 1403 aa26.3■■□□□ 1.8
NXF1-217ENST00000533671 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
NXF1-217ENST00000533671 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
NXF1-217ENST00000533671 STRCQ7RTU9 1775 aa26.28■■□□□ 1.8
NXF1-217ENST00000533671 IQGAP3Q86VI3 1631 aa26.27■■□□□ 1.8
NXF1-217ENST00000533671 HFM1A2PYH4 1435 aa26.26■■□□□ 1.79
NXF1-217ENST00000533671 DMRT2Q9Y5R5 561 aa26.26■■□□□ 1.79
NXF1-217ENST00000533671 UGGT1Q9NYU2 1555 aa26.24■■□□□ 1.79
NXF1-217ENST00000533671 THEMISQ8N1K5 641 aaPredicted RBP26.23■■□□□ 1.79
NXF1-217ENST00000533671 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
NXF1-217ENST00000533671 RPRD2Q5VT52 1461 aaKnown RBP26.22■■□□□ 1.79
NXF1-217ENST00000533671 PLA2R1Q13018 1463 aa26.2■■□□□ 1.78
NXF1-217ENST00000533671 NCKAP5LQ9HCH0 1330 aa26.19■■□□□ 1.78
NXF1-217ENST00000533671 E9PCH4 1651 aa26.19■■□□□ 1.78
NXF1-217ENST00000533671 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
NXF1-217ENST00000533671 PKD2Q13563 968 aa26.18■■□□□ 1.78
NXF1-217ENST00000533671 NOS1P29475 1434 aa26.15■■□□□ 1.78
NXF1-217ENST00000533671 UBR1Q8IWV7 1749 aa26.15■■□□□ 1.78
NXF1-217ENST00000533671 SYNMO15061 1565 aa26.15■■□□□ 1.78
NXF1-217ENST00000533671 PIK3C2BO00750 1634 aa26.14■■□□□ 1.78
NXF1-217ENST00000533671 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.78
NXF1-217ENST00000533671 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
NXF1-217ENST00000533671 PTPRTO14522 1441 aa26.13■■□□□ 1.77
NXF1-217ENST00000533671 IDI1Q13907 227 aa26.12■■□□□ 1.77
NXF1-217ENST00000533671 SLC52A1Q9NWF4 448 aa26.12■■□□□ 1.77
NXF1-217ENST00000533671 SETD5Q9C0A6 1442 aa26.07■■□□□ 1.76
NXF1-217ENST00000533671 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
NXF1-217ENST00000533671 KDM5AP29375 1690 aaKnown RBP26.06■■□□□ 1.76
NXF1-217ENST00000533671 SPHKAPQ2M3C7 1700 aa26.06■■□□□ 1.76
NXF1-217ENST00000533671 CHGAP10645 457 aaKnown RBP26.05■■□□□ 1.76
NXF1-217ENST00000533671 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
NXF1-217ENST00000533671 EID1Q9Y6B2 187 aa26.03■■□□□ 1.76
NXF1-217ENST00000533671 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
NXF1-217ENST00000533671 MYO5BQ9ULV0 1848 aa26.02■■□□□ 1.76
NXF1-217ENST00000533671 TXNDC2Q86VQ3 553 aa26.01■■□□□ 1.75
NXF1-217ENST00000533671 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
NXF1-217ENST00000533671 SLIT1O75093 1534 aa25.99■■□□□ 1.75
NXF1-217ENST00000533671 NPHP4O75161 1426 aaPredicted RBP25.98■■□□□ 1.75
NXF1-217ENST00000533671 TMEM2Q9UHN6 1383 aa25.98■■□□□ 1.75
NXF1-217ENST00000533671 SCAF11Q99590 1463 aaKnown RBP25.98■■□□□ 1.75
NXF1-217ENST00000533671 IQGAP1P46940 1657 aa25.97■■□□□ 1.75
NXF1-217ENST00000533671 ARHGAP23Q9P227 1491 aa25.97■■□□□ 1.75
NXF1-217ENST00000533671 RAB3GAP2Q9H2M9 1393 aa25.96■■□□□ 1.75
NXF1-217ENST00000533671 TMEM131LA2VDJ0 1609 aa25.96■■□□□ 1.75
NXF1-217ENST00000533671 MED14O60244 1454 aa25.95■■□□□ 1.74
NXF1-217ENST00000533671 LTKP29376 864 aa25.94■■□□□ 1.74
NXF1-217ENST00000533671 MPHOSPH9Q99550 1183 aa25.94■■□□□ 1.74
NXF1-217ENST00000533671 HDGFP51858 240 aaKnown RBP25.93■■□□□ 1.74
NXF1-217ENST00000533671 TRPM2O94759 1503 aa25.92■■□□□ 1.74
NXF1-217ENST00000533671 KIF1BO60333 1816 aa25.91■■□□□ 1.74
NXF1-217ENST00000533671 ZNF335Q9H4Z2 1342 aaPredicted RBP25.9■■□□□ 1.74
NXF1-217ENST00000533671 PPP1R15AO75807 674 aaPredicted RBP25.9■■□□□ 1.74
NXF1-217ENST00000533671 CERKQ8TCT0 537 aa25.9■■□□□ 1.74
NXF1-217ENST00000533671 BCANQ96GW7 911 aa25.9■■□□□ 1.74
NXF1-217ENST00000533671 FOXD1Q16676 465 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms