RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ARHGEF40Q8TER5 1519 aa27.1■■□□□ 1.93
SMPD1-208ENST00000533123 EIF2AK4Q9P2K8 1649 aaKnown RBP27.1■■□□□ 1.93
SMPD1-208ENST00000533123 SLC4A1APQ9BWU0 796 aaKnown RBP27.09■■□□□ 1.93
SMPD1-208ENST00000533123 UNC13BO14795 1591 aa27.08■■□□□ 1.93
SMPD1-208ENST00000533123 PZPP20742 1482 aa27.07■■□□□ 1.92
SMPD1-208ENST00000533123 GGT6Q6P531 493 aa27.05■■□□□ 1.92
SMPD1-208ENST00000533123 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
SMPD1-208ENST00000533123 KDM5DQ9BY66 1539 aa27.04■■□□□ 1.92
SMPD1-208ENST00000533123 DEPDC5O75140 1603 aa27.04■■□□□ 1.92
SMPD1-208ENST00000533123 REREQ9P2R6 1566 aa27.03■■□□□ 1.92
SMPD1-208ENST00000533123 FOXD1Q16676 465 aa27.02■■□□□ 1.92
SMPD1-208ENST00000533123 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
SMPD1-208ENST00000533123 SIGLEC1Q9BZZ2 1709 aa27.01■■□□□ 1.91
SMPD1-208ENST00000533123 MROH1Q8NDA8 1641 aa27■■□□□ 1.91
SMPD1-208ENST00000533123 BCORL1Q5H9F3 1711 aa27■■□□□ 1.91
SMPD1-208ENST00000533123 RNF17Q9BXT8 1623 aaKnown RBP26.99■■□□□ 1.91
SMPD1-208ENST00000533123 PKD2Q13563 968 aa26.98■■□□□ 1.91
SMPD1-208ENST00000533123 IQGAP3Q86VI3 1631 aa26.98■■□□□ 1.91
SMPD1-208ENST00000533123 PRDM15P57071 1507 aaPredicted RBP26.98■■□□□ 1.91
SMPD1-208ENST00000533123 KANK1Q14678 1352 aa26.98■■□□□ 1.91
SMPD1-208ENST00000533123 AGLP35573 1532 aa26.96■■□□□ 1.91
SMPD1-208ENST00000533123 ARID4BQ4LE39 1312 aaPredicted RBP26.95■■□□□ 1.9
SMPD1-208ENST00000533123 MLECQ14165 292 aa26.93■■□□□ 1.9
SMPD1-208ENST00000533123 VWDEQ8N2E2 1590 aa26.93■■□□□ 1.9
SMPD1-208ENST00000533123 WASHC2CQ9Y4E1 1318 aa26.91■■□□□ 1.9
SMPD1-208ENST00000533123 SIN3AQ96ST3 1273 aa26.89■■□□□ 1.89
SMPD1-208ENST00000533123 CEP152O94986 1710 aa26.87■■□□□ 1.89
SMPD1-208ENST00000533123 ANKRD30BQ9BXX2 1392 aa26.85■■□□□ 1.89
SMPD1-208ENST00000533123 ABCC3O15438 1527 aa26.84■■□□□ 1.89
SMPD1-208ENST00000533123 NEUROD1Q13562 356 aa26.84■■□□□ 1.89
SMPD1-208ENST00000533123 TET3O43151 1660 aa26.84■■□□□ 1.89
SMPD1-208ENST00000533123 LMTK2Q8IWU2 1503 aa26.83■■□□□ 1.89
SMPD1-208ENST00000533123 E9PCH4 1651 aa26.81■■□□□ 1.88
SMPD1-208ENST00000533123 PPP6R1Q9UPN7 881 aa26.8■■□□□ 1.88
SMPD1-208ENST00000533123 EFCAB6Q5THR3 1501 aa26.79■■□□□ 1.88
SMPD1-208ENST00000533123 ZC3H13Q5T200 1668 aaKnown RBP26.77■■□□□ 1.88
SMPD1-208ENST00000533123 CAMSAP1Q5T5Y3 1602 aa26.76■■□□□ 1.87
SMPD1-208ENST00000533123 ESF1Q9H501 851 aaKnown RBP26.75■■□□□ 1.87
SMPD1-208ENST00000533123 NPATQ14207 1427 aa26.75■■□□□ 1.87
SMPD1-208ENST00000533123 PLA2R1Q13018 1463 aa26.75■■□□□ 1.87
SMPD1-208ENST00000533123 CFAP65Q6ZU64 1925 aaKnown RBP26.73■■□□□ 1.87
SMPD1-208ENST00000533123 CLTCQ00610 1675 aaKnown RBP26.73■■□□□ 1.87
SMPD1-208ENST00000533123 RPRD2Q5VT52 1461 aaKnown RBP26.69■■□□□ 1.86
SMPD1-208ENST00000533123 ARHGAP31Q2M1Z3 1444 aa26.69■■□□□ 1.86
SMPD1-208ENST00000533123 PTPRTO14522 1441 aa26.68■■□□□ 1.86
SMPD1-208ENST00000533123 CCDC144AA2RUR9 1427 aa26.67■■□□□ 1.86
SMPD1-208ENST00000533123 SPHKAPQ2M3C7 1700 aa26.67■■□□□ 1.86
SMPD1-208ENST00000533123 ZMYM3Q14202 1370 aa26.65■■□□□ 1.86
SMPD1-208ENST00000533123 FBXO31Q5XUX0 539 aaPredicted RBP26.65■■□□□ 1.86
SMPD1-208ENST00000533123 TRPM2O94759 1503 aa26.63■■□□□ 1.85
SMPD1-208ENST00000533123 TONSLQ96HA7 1378 aa26.62■■□□□ 1.85
SMPD1-208ENST00000533123 CNTLNQ9NXG0 1405 aa26.62■■□□□ 1.85
SMPD1-208ENST00000533123 FER1L4A9Z1Z3 1794 aa26.61■■□□□ 1.85
SMPD1-208ENST00000533123 NOS1P29475 1434 aa26.6■■□□□ 1.85
SMPD1-208ENST00000533123 UGGT1Q9NYU2 1555 aa26.59■■□□□ 1.85
SMPD1-208ENST00000533123 ZNF316A6NFI3 1004 aaPredicted RBP26.58■■□□□ 1.85
SMPD1-208ENST00000533123 TIMELESSQ9UNS1 1208 aa26.58■■□□□ 1.85
SMPD1-208ENST00000533123 PREX1Q8TCU6 1659 aa26.57■■□□□ 1.84
SMPD1-208ENST00000533123 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
SMPD1-208ENST00000533123 CEBPAP49715 358 aaPredicted RBP26.57■■□□□ 1.84
SMPD1-208ENST00000533123 L3MBTL2Q969R5 705 aa26.55■■□□□ 1.84
SMPD1-208ENST00000533123 MADDQ8WXG6 1647 aa26.55■■□□□ 1.84
SMPD1-208ENST00000533123 ERVK-7P63135 1459 aa26.55■■□□□ 1.84
SMPD1-208ENST00000533123 PLPPR3Q6T4P5 718 aa26.55■■□□□ 1.84
SMPD1-208ENST00000533123 SYNMO15061 1565 aa26.55■■□□□ 1.84
SMPD1-208ENST00000533123 MROH2AA6NES4 1674 aa26.55■■□□□ 1.84
SMPD1-208ENST00000533123 RGL3Q3MIN7 710 aa26.53■■□□□ 1.84
SMPD1-208ENST00000533123 ADAMTSL3P82987 1691 aa26.53■■□□□ 1.84
SMPD1-208ENST00000533123 IDI1Q13907 227 aa26.5■■□□□ 1.83
SMPD1-208ENST00000533123 SPATA31D1Q6ZQQ2 1576 aa26.5■■□□□ 1.83
SMPD1-208ENST00000533123 RIMS1Q86UR5 1692 aaKnown RBP26.49■■□□□ 1.83
SMPD1-208ENST00000533123 C3P01024 1663 aa26.49■■□□□ 1.83
SMPD1-208ENST00000533123 SLC52A1Q9NWF4 448 aa26.49■■□□□ 1.83
SMPD1-208ENST00000533123 PPP1R15AO75807 674 aaPredicted RBP26.47■■□□□ 1.83
SMPD1-208ENST00000533123 CHGAP10645 457 aaKnown RBP26.47■■□□□ 1.83
SMPD1-208ENST00000533123 SPATA31E1Q6ZUB1 1445 aa26.47■■□□□ 1.83
SMPD1-208ENST00000533123 PIK3C2BO00750 1634 aa26.46■■□□□ 1.83
SMPD1-208ENST00000533123 KIF1BO60333 1816 aa26.45■■□□□ 1.82
SMPD1-208ENST00000533123 DCAF11Q8TEB1 546 aa26.43■■□□□ 1.82
SMPD1-208ENST00000533123 TNRQ92752 1358 aa26.43■■□□□ 1.82
SMPD1-208ENST00000533123 KDM2AQ9Y2K7 1162 aa26.42■■□□□ 1.82
SMPD1-208ENST00000533123 DIEXFQ68CQ4 756 aaKnown RBP26.39■■□□□ 1.82
SMPD1-208ENST00000533123 ZNF326Q5BKZ1 582 aaKnown RBP26.38■■□□□ 1.81
SMPD1-208ENST00000533123 ADGRB3O60242 1522 aa26.37■■□□□ 1.81
SMPD1-208ENST00000533123 STAG3Q9UJ98 1225 aa26.37■■□□□ 1.81
SMPD1-208ENST00000533123 NEURL4Q96JN8 1562 aa26.36■■□□□ 1.81
SMPD1-208ENST00000533123 PTPRMP28827 1452 aa26.34■■□□□ 1.81
SMPD1-208ENST00000533123 NBPF8Q3BBV2 869 aa26.34■■□□□ 1.81
SMPD1-208ENST00000533123 TMEM131LA2VDJ0 1609 aa26.33■■□□□ 1.81
SMPD1-208ENST00000533123 MYO5BQ9ULV0 1848 aa26.32■■□□□ 1.8
SMPD1-208ENST00000533123 KDM4FA0A1W2PPD8 638 aa26.31■■□□□ 1.8
SMPD1-208ENST00000533123 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
SMPD1-208ENST00000533123 A2ML1A8K2U0 1454 aa26.28■■□□□ 1.8
SMPD1-208ENST00000533123 NUTM2DQ5VT03 806 aaPredicted RBP26.27■■□□□ 1.8
SMPD1-208ENST00000533123 RPGRIP1LQ68CZ1 1315 aa26.26■■□□□ 1.79
SMPD1-208ENST00000533123 UHRF1BP1Q6BDS2 1440 aa26.26■■□□□ 1.79
SMPD1-208ENST00000533123 PRAG1Q86YV5 1406 aa26.24■■□□□ 1.79
SMPD1-208ENST00000533123 IFT172Q9UG01 1749 aa26.24■■□□□ 1.79
SMPD1-208ENST00000533123 STAC3Q96MF2 364 aa26.23■■□□□ 1.79
SMPD1-208ENST00000533123 SETD1BQ9UPS6 1966 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms