RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 CEP170BQ9Y4F5 1589 aaPredicted RBP20.83■□□□□ 0.92
COPB1-209ENST00000533096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.925e-32■■□□□ 12.3
COPB1-209ENST00000533096 RSPH4AQ5TD94 716 aa20.82■□□□□ 0.92
COPB1-209ENST00000533096 A2ML1A8K2U0 1454 aa20.81■□□□□ 0.92
COPB1-209ENST00000533096 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
COPB1-209ENST00000533096 PLXNC1O60486 1568 aa20.8■□□□□ 0.92
COPB1-209ENST00000533096 INO80Q9ULG1 1556 aaPredicted RBP20.8■□□□□ 0.92
COPB1-209ENST00000533096 MYO3AQ8NEV4 1616 aa20.79■□□□□ 0.92
COPB1-209ENST00000533096 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
COPB1-209ENST00000533096 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
COPB1-209ENST00000533096 SHANK2Q9UPX8 1470 aa20.75■□□□□ 0.91
COPB1-209ENST00000533096 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
COPB1-209ENST00000533096 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
COPB1-209ENST00000533096 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
COPB1-209ENST00000533096 CCDC141Q6ZP82 1450 aa20.7■□□□□ 0.9
COPB1-209ENST00000533096 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
COPB1-209ENST00000533096 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
COPB1-209ENST00000533096 PZPP20742 1482 aa20.69■□□□□ 0.9
COPB1-209ENST00000533096 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
COPB1-209ENST00000533096 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
COPB1-209ENST00000533096 ZNF142P52746 1687 aaPredicted RBP20.69■□□□□ 0.9
COPB1-209ENST00000533096 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
COPB1-209ENST00000533096 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
COPB1-209ENST00000533096 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
COPB1-209ENST00000533096 CPS1P31327 1500 aa20.66■□□□□ 0.9
COPB1-209ENST00000533096 KDM5DQ9BY66 1539 aa20.65■□□□□ 0.9
COPB1-209ENST00000533096 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
COPB1-209ENST00000533096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.898e-14■□□□□ 10.5
COPB1-209ENST00000533096 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
COPB1-209ENST00000533096 KANK4Q5T7N3 995 aaPredicted RBP20.63■□□□□ 0.89
COPB1-209ENST00000533096 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
COPB1-209ENST00000533096 NEURL4Q96JN8 1562 aa20.61■□□□□ 0.89
COPB1-209ENST00000533096 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
COPB1-209ENST00000533096 LTKP29376 864 aa20.59■□□□□ 0.89
COPB1-209ENST00000533096 STAG3Q9UJ98 1225 aa20.59■□□□□ 0.89
COPB1-209ENST00000533096 MED1Q15648 1581 aaPredicted RBP20.57■□□□□ 0.88
COPB1-209ENST00000533096 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
COPB1-209ENST00000533096 VWDEQ8N2E2 1590 aa20.56■□□□□ 0.88
COPB1-209ENST00000533096 MED14O60244 1454 aa20.56■□□□□ 0.88
COPB1-209ENST00000533096 LRRC7Q96NW7 1537 aa20.53■□□□□ 0.88
COPB1-209ENST00000533096 RBM33Q96EV2 1170 aaKnown RBP20.52■□□□□ 0.88
COPB1-209ENST00000533096 BCANQ96GW7 911 aa20.51■□□□□ 0.87
COPB1-209ENST00000533096 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
COPB1-209ENST00000533096 ABCC3O15438 1527 aa20.5■□□□□ 0.87
COPB1-209ENST00000533096 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
COPB1-209ENST00000533096 POLR1AO95602 1720 aaPredicted RBP20.5■□□□□ 0.87
COPB1-209ENST00000533096 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
COPB1-209ENST00000533096 ARHGEF5Q12774 1597 aa20.49■□□□□ 0.87
COPB1-209ENST00000533096 APLP2Q06481 763 aa20.48■□□□□ 0.87
COPB1-209ENST00000533096 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
COPB1-209ENST00000533096 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
COPB1-209ENST00000533096 RGS17Q9UGC6 210 aaPredicted RBP20.46■□□□□ 0.87
COPB1-209ENST00000533096 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
COPB1-209ENST00000533096 ALKQ9UM73 1620 aa20.45■□□□□ 0.87
COPB1-209ENST00000533096 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
COPB1-209ENST00000533096 IDI1Q13907 227 aa20.45■□□□□ 0.86
COPB1-209ENST00000533096 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
COPB1-209ENST00000533096 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
COPB1-209ENST00000533096 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
COPB1-209ENST00000533096 IQGAP1P46940 1657 aa20.43■□□□□ 0.86
COPB1-209ENST00000533096 KANK1Q14678 1352 aa20.41■□□□□ 0.86
COPB1-209ENST00000533096 KCNA6P17658 529 aa20.4■□□□□ 0.86
COPB1-209ENST00000533096 TMEM2Q9UHN6 1383 aa20.39■□□□□ 0.85
COPB1-209ENST00000533096 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
COPB1-209ENST00000533096 ABCC5O15440 1437 aa20.38■□□□□ 0.85
COPB1-209ENST00000533096 TMEM94Q12767 1356 aa20.38■□□□□ 0.85
COPB1-209ENST00000533096 POTEAQ6S8J7 498 aa20.37■□□□□ 0.85
COPB1-209ENST00000533096 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
COPB1-209ENST00000533096 MAST1Q9Y2H9 1570 aa20.37■□□□□ 0.85
COPB1-209ENST00000533096 STRCP1A6NGW2 1772 aa20.36■□□□□ 0.85
COPB1-209ENST00000533096 ARHGAP31Q2M1Z3 1444 aa20.35■□□□□ 0.85
COPB1-209ENST00000533096 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
COPB1-209ENST00000533096 MROH1Q8NDA8 1641 aa20.34■□□□□ 0.85
COPB1-209ENST00000533096 CFAP65Q6ZU64 1925 aaKnown RBP20.33■□□□□ 0.85
COPB1-209ENST00000533096 FAM135BQ49AJ0 1406 aa20.33■□□□□ 0.84
COPB1-209ENST00000533096 SLIT1O75093 1534 aa20.32■□□□□ 0.84
COPB1-209ENST00000533096 CHGAP10645 457 aaKnown RBP20.31■□□□□ 0.84
COPB1-209ENST00000533096 FAM50AQ14320 339 aaKnown RBP20.31■□□□□ 0.84
COPB1-209ENST00000533096 SLAIN2Q9P270 581 aa20.31■□□□□ 0.84
COPB1-209ENST00000533096 ZC3H13Q5T200 1668 aaKnown RBP20.31■□□□□ 0.84
COPB1-209ENST00000533096 ANKRD30AQ9BXX3 1397 aa20.31■□□□□ 0.84
COPB1-209ENST00000533096 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
COPB1-209ENST00000533096 CEP152O94986 1710 aa20.3■□□□□ 0.84
COPB1-209ENST00000533096 UBR1Q8IWV7 1749 aa20.3■□□□□ 0.84
COPB1-209ENST00000533096 ERBINQ96RT1 1412 aa20.3■□□□□ 0.84
COPB1-209ENST00000533096 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
COPB1-209ENST00000533096 C14orf37Q86TY3 774 aa20.29■□□□□ 0.84
COPB1-209ENST00000533096 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
COPB1-209ENST00000533096 DAPK1P53355 1430 aa20.28■□□□□ 0.84
COPB1-209ENST00000533096 NUTM2DQ5VT03 806 aaPredicted RBP20.28■□□□□ 0.84
COPB1-209ENST00000533096 SYNMO15061 1565 aa20.27■□□□□ 0.84
COPB1-209ENST00000533096 HDGFP51858 240 aaKnown RBP20.27■□□□□ 0.84
COPB1-209ENST00000533096 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
COPB1-209ENST00000533096 MSH6P52701 1360 aa20.24■□□□□ 0.83
COPB1-209ENST00000533096 EFCAB6Q5THR3 1501 aa20.24■□□□□ 0.83
COPB1-209ENST00000533096 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
COPB1-209ENST00000533096 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
COPB1-209ENST00000533096 PRDM15P57071 1507 aaPredicted RBP20.21■□□□□ 0.83
COPB1-209ENST00000533096 MEX3CQ5U5Q3 659 aaKnown RBP20.2■□□□□ 0.82
COPB1-209ENST00000533096 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms