RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FAM135AQ9P2D6 1515 aa23.73■■□□□ 1.39
CPSF1-210ENST00000532935 KDM5DQ9BY66 1539 aa23.71■■□□□ 1.39
CPSF1-210ENST00000532935 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
CPSF1-210ENST00000532935 NPATQ14207 1427 aa23.69■■□□□ 1.38
CPSF1-210ENST00000532935 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
CPSF1-210ENST00000532935 HSPA2P54652 639 aa23.68■■□□□ 1.38
CPSF1-210ENST00000532935 RRP7BPQ9NSQ0 103 aa23.68■■□□□ 1.38
CPSF1-210ENST00000532935 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
CPSF1-210ENST00000532935 ANKRD30AQ9BXX3 1397 aa23.67■■□□□ 1.38
CPSF1-210ENST00000532935 MROH1Q8NDA8 1641 aa23.67■■□□□ 1.38
CPSF1-210ENST00000532935 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
CPSF1-210ENST00000532935 ZC3H13Q5T200 1668 aaKnown RBP23.67■■□□□ 1.38
CPSF1-210ENST00000532935 ADGRL2O95490 1459 aa23.66■■□□□ 1.38
CPSF1-210ENST00000532935 PTPRKQ15262 1439 aa23.65■■□□□ 1.38
CPSF1-210ENST00000532935 WASHC2CQ9Y4E1 1318 aa23.64■■□□□ 1.38
CPSF1-210ENST00000532935 NCOA1Q15788 1441 aa23.64■■□□□ 1.37
CPSF1-210ENST00000532935 CEP152O94986 1710 aa23.63■■□□□ 1.37
CPSF1-210ENST00000532935 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
CPSF1-210ENST00000532935 ABCC3O15438 1527 aa23.62■■□□□ 1.37
CPSF1-210ENST00000532935 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
CPSF1-210ENST00000532935 PRDM15P57071 1507 aaPredicted RBP23.6■■□□□ 1.37
CPSF1-210ENST00000532935 PZPP20742 1482 aa23.6■■□□□ 1.37
CPSF1-210ENST00000532935 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
CPSF1-210ENST00000532935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.58■■□□□ 1.37
CPSF1-210ENST00000532935 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
CPSF1-210ENST00000532935 CAMSAP1Q5T5Y3 1602 aa23.57■■□□□ 1.36
CPSF1-210ENST00000532935 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
CPSF1-210ENST00000532935 CEP170BQ9Y4F5 1589 aaPredicted RBP23.54■■□□□ 1.36
CPSF1-210ENST00000532935 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
CPSF1-210ENST00000532935 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.36
CPSF1-210ENST00000532935 ROCK1Q13464 1354 aa23.51■■□□□ 1.35
CPSF1-210ENST00000532935 TNRQ92752 1358 aa23.51■■□□□ 1.35
CPSF1-210ENST00000532935 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
CPSF1-210ENST00000532935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.354e-8■■■□□ 18.5
CPSF1-210ENST00000532935 VWDEQ8N2E2 1590 aa23.49■■□□□ 1.35
CPSF1-210ENST00000532935 ITGAEP38570 1179 aa23.49■■□□□ 1.35
CPSF1-210ENST00000532935 KANK1Q14678 1352 aa23.49■■□□□ 1.35
CPSF1-210ENST00000532935 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
CPSF1-210ENST00000532935 A2ML1A8K2U0 1454 aa23.48■■□□□ 1.35
CPSF1-210ENST00000532935 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
CPSF1-210ENST00000532935 ERVK-7P63135 1459 aa23.45■■□□□ 1.34
CPSF1-210ENST00000532935 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
CPSF1-210ENST00000532935 UNC13BO14795 1591 aa23.43■■□□□ 1.34
CPSF1-210ENST00000532935 NLRP1Q9C000 1473 aa23.43■■□□□ 1.34
CPSF1-210ENST00000532935 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
CPSF1-210ENST00000532935 PLA2R1Q13018 1463 aa23.41■■□□□ 1.34
CPSF1-210ENST00000532935 EFCAB6Q5THR3 1501 aa23.39■■□□□ 1.34
CPSF1-210ENST00000532935 PTPRTO14522 1441 aa23.38■■□□□ 1.33
CPSF1-210ENST00000532935 UGGT1Q9NYU2 1555 aa23.37■■□□□ 1.33
CPSF1-210ENST00000532935 TET3O43151 1660 aa23.37■■□□□ 1.33
CPSF1-210ENST00000532935 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
CPSF1-210ENST00000532935 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
CPSF1-210ENST00000532935 NCKAP5LQ9HCH0 1330 aa23.34■■□□□ 1.33
CPSF1-210ENST00000532935 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
CPSF1-210ENST00000532935 UBR1Q8IWV7 1749 aa23.33■■□□□ 1.33
CPSF1-210ENST00000532935 PKD2Q13563 968 aa23.33■■□□□ 1.33
CPSF1-210ENST00000532935 THEMISQ8N1K5 641 aaPredicted RBP23.3■■□□□ 1.32
CPSF1-210ENST00000532935 SYNMO15061 1565 aa23.3■■□□□ 1.32
CPSF1-210ENST00000532935 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
CPSF1-210ENST00000532935 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
CPSF1-210ENST00000532935 E9PCH4 1651 aa23.28■■□□□ 1.32
CPSF1-210ENST00000532935 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
CPSF1-210ENST00000532935 NOS1P29475 1434 aa23.27■■□□□ 1.32
CPSF1-210ENST00000532935 NAIPQ13075 1403 aa23.27■■□□□ 1.32
CPSF1-210ENST00000532935 NUP155O75694 1391 aa23.26■■□□□ 1.31
CPSF1-210ENST00000532935 KDM5AP29375 1690 aaKnown RBP23.25■■□□□ 1.31
CPSF1-210ENST00000532935 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
CPSF1-210ENST00000532935 HFM1A2PYH4 1435 aa23.23■■□□□ 1.31
CPSF1-210ENST00000532935 IDI1Q13907 227 aa23.2■■□□□ 1.3
CPSF1-210ENST00000532935 IQGAP1P46940 1657 aa23.19■■□□□ 1.3
CPSF1-210ENST00000532935 LTBP4Q8N2S1 1624 aa23.19■■□□□ 1.3
CPSF1-210ENST00000532935 SLIT1O75093 1534 aa23.19■■□□□ 1.3
CPSF1-210ENST00000532935 MED14O60244 1454 aa23.19■■□□□ 1.3
CPSF1-210ENST00000532935 ILDR1Q86SU0 546 aaPredicted RBP23.19■■□□□ 1.3
CPSF1-210ENST00000532935 CERKQ8TCT0 537 aa23.19■■□□□ 1.3
CPSF1-210ENST00000532935 MYO5BQ9ULV0 1848 aa23.19■■□□□ 1.3
CPSF1-210ENST00000532935 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
CPSF1-210ENST00000532935 ARHGAP23Q9P227 1491 aa23.17■■□□□ 1.3
CPSF1-210ENST00000532935 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
CPSF1-210ENST00000532935 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
CPSF1-210ENST00000532935 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
CPSF1-210ENST00000532935 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
CPSF1-210ENST00000532935 SCAF11Q99590 1463 aaKnown RBP23.14■■□□□ 1.29
CPSF1-210ENST00000532935 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
CPSF1-210ENST00000532935 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
CPSF1-210ENST00000532935 TMEM2Q9UHN6 1383 aa23.13■■□□□ 1.29
CPSF1-210ENST00000532935 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
CPSF1-210ENST00000532935 LTKP29376 864 aa23.1■■□□□ 1.29
CPSF1-210ENST00000532935 TXNDC2Q86VQ3 553 aa23.1■■□□□ 1.29
CPSF1-210ENST00000532935 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
CPSF1-210ENST00000532935 EID1Q9Y6B2 187 aa23.08■■□□□ 1.29
CPSF1-210ENST00000532935 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
CPSF1-210ENST00000532935 STRCP1A6NGW2 1772 aa23.03■■□□□ 1.28
CPSF1-210ENST00000532935 TRPM2O94759 1503 aa23.02■■□□□ 1.28
CPSF1-210ENST00000532935 CPS1P31327 1500 aa23.02■■□□□ 1.28
CPSF1-210ENST00000532935 ZFYVE9O95405 1425 aa23.01■■□□□ 1.27
CPSF1-210ENST00000532935 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
CPSF1-210ENST00000532935 CLTCL1P53675 1640 aa23■■□□□ 1.27
CPSF1-210ENST00000532935 RIMS2Q9UQ26 1411 aa22.99■■□□□ 1.27
CPSF1-210ENST00000532935 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms