RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 MBD5Q9P267 1494 aa19.5■□□□□ 0.71
LTBP3-221ENST00000532932 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
LTBP3-221ENST00000532932 KDM5CP41229 1560 aa19.48■□□□□ 0.71
LTBP3-221ENST00000532932 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
LTBP3-221ENST00000532932 C20orf194Q5TEA3 1177 aa19.46■□□□□ 0.71
LTBP3-221ENST00000532932 NFKBIBQ15653 356 aa19.46■□□□□ 0.71
LTBP3-221ENST00000532932 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
LTBP3-221ENST00000532932 GSE1Q14687 1217 aa19.45■□□□□ 0.7
LTBP3-221ENST00000532932 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
LTBP3-221ENST00000532932 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
LTBP3-221ENST00000532932 KIF14Q15058 1648 aa19.44■□□□□ 0.7
LTBP3-221ENST00000532932 RALGAPBQ86X10 1494 aa19.43■□□□□ 0.7
LTBP3-221ENST00000532932 WASHC2CQ9Y4E1 1318 aa19.42■□□□□ 0.7
LTBP3-221ENST00000532932 RGS3P49796 1198 aa19.42■□□□□ 0.7
LTBP3-221ENST00000532932 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
LTBP3-221ENST00000532932 NBPF1Q3BBV0 1214 aa19.41■□□□□ 0.7
LTBP3-221ENST00000532932 NUP153P49790 1475 aaKnown RBP19.41■□□□□ 0.7
LTBP3-221ENST00000532932 FRAT1Q92837 279 aaPredicted RBP19.41■□□□□ 0.7
LTBP3-221ENST00000532932 TSPY4P0CV99 314 aa19.4■□□□□ 0.7
LTBP3-221ENST00000532932 TSPY10P0CW01 314 aa19.4■□□□□ 0.7
LTBP3-221ENST00000532932 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
LTBP3-221ENST00000532932 EIF4G3O43432 1585 aaKnown RBP19.39■□□□□ 0.69
LTBP3-221ENST00000532932 PANK3Q9H999 370 aa19.38■□□□□ 0.69
LTBP3-221ENST00000532932 UHRF1BP1Q6BDS2 1440 aa19.38■□□□□ 0.69
LTBP3-221ENST00000532932 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
LTBP3-221ENST00000532932 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
LTBP3-221ENST00000532932 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
LTBP3-221ENST00000532932 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
LTBP3-221ENST00000532932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.699e-7■□□□□ 10.7
LTBP3-221ENST00000532932 PER1O15534 1290 aaPredicted RBP19.35■□□□□ 0.69
LTBP3-221ENST00000532932 GPATCH8Q9UKJ3 1502 aaKnown RBP19.34■□□□□ 0.69
LTBP3-221ENST00000532932 HNRNPMP52272 730 aaKnown RBP eCLIP19.34■□□□□ 0.69
LTBP3-221ENST00000532932 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
LTBP3-221ENST00000532932 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
LTBP3-221ENST00000532932 FRAT2O75474 233 aaPredicted RBP19.32■□□□□ 0.68
LTBP3-221ENST00000532932 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
LTBP3-221ENST00000532932 WDR43Q15061 677 aaKnown RBP eCLIP19.31■□□□□ 0.68
LTBP3-221ENST00000532932 CENPQQ7L2Z9 268 aaPredicted RBP19.31■□□□□ 0.68
LTBP3-221ENST00000532932 PLEKHD1A6NEE1 506 aa19.3■□□□□ 0.68
LTBP3-221ENST00000532932 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
LTBP3-221ENST00000532932 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
LTBP3-221ENST00000532932 C9orf84Q5VXU9 1444 aa19.28■□□□□ 0.68
LTBP3-221ENST00000532932 RAPGEF6Q8TEU7 1601 aa19.28■□□□□ 0.68
LTBP3-221ENST00000532932 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
LTBP3-221ENST00000532932 DISP3Q9P2K9 1392 aa19.27■□□□□ 0.68
LTBP3-221ENST00000532932 KDM2BQ8NHM5 1336 aa19.26■□□□□ 0.67
LTBP3-221ENST00000532932 ADGRL2O95490 1459 aa19.26■□□□□ 0.67
LTBP3-221ENST00000532932 C8orf34Q49A92 452 aa19.26■□□□□ 0.67
LTBP3-221ENST00000532932 KIAA0556O60303 1618 aa19.26■□□□□ 0.67
LTBP3-221ENST00000532932 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
LTBP3-221ENST00000532932 ARHGEF12Q9NZN5 1544 aa19.25■□□□□ 0.67
LTBP3-221ENST00000532932 TMF1P82094 1093 aa19.25■□□□□ 0.67
LTBP3-221ENST00000532932 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
LTBP3-221ENST00000532932 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
LTBP3-221ENST00000532932 ADGBQ8N7X0 1667 aa19.24■□□□□ 0.67
LTBP3-221ENST00000532932 CCDC144AA2RUR9 1427 aa19.23■□□□□ 0.67
LTBP3-221ENST00000532932 GOLGA2Q08379 1002 aa19.23■□□□□ 0.67
LTBP3-221ENST00000532932 CARMIL2Q6F5E8 1435 aa19.23■□□□□ 0.67
LTBP3-221ENST00000532932 DUSP27Q5VZP5 1158 aa19.23■□□□□ 0.67
LTBP3-221ENST00000532932 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
LTBP3-221ENST00000532932 TESK2Q96S53 571 aa19.22■□□□□ 0.67
LTBP3-221ENST00000532932 BLMP54132 1417 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-221ENST00000532932 PLEKHH1Q9ULM0 1364 aa19.21■□□□□ 0.67
LTBP3-221ENST00000532932 ARXQ96QS3 562 aa19.2■□□□□ 0.66
LTBP3-221ENST00000532932 PRAG1Q86YV5 1406 aa19.2■□□□□ 0.66
LTBP3-221ENST00000532932 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
LTBP3-221ENST00000532932 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
LTBP3-221ENST00000532932 SLKQ9H2G2 1235 aaPredicted RBP19.17■□□□□ 0.66
LTBP3-221ENST00000532932 ERBINQ96RT1 1412 aa19.17■□□□□ 0.66
LTBP3-221ENST00000532932 BCAR3O75815 825 aa19.17■□□□□ 0.66
LTBP3-221ENST00000532932 E9PCH4 1651 aa19.16■□□□□ 0.66
LTBP3-221ENST00000532932 CEP170Q5SW79 1584 aa19.16■□□□□ 0.66
LTBP3-221ENST00000532932 CANXP27824 592 aaKnown RBP19.15■□□□□ 0.66
LTBP3-221ENST00000532932 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
LTBP3-221ENST00000532932 COL17A1Q9UMD9 1497 aaPredicted RBP19.14■□□□□ 0.65
LTBP3-221ENST00000532932 APAF1O14727 1248 aa19.13■□□□□ 0.65
LTBP3-221ENST00000532932 PTPRGP23470 1445 aa19.12■□□□□ 0.65
LTBP3-221ENST00000532932 POGKQ9P215 609 aa19.12■□□□□ 0.65
LTBP3-221ENST00000532932 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
LTBP3-221ENST00000532932 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
LTBP3-221ENST00000532932 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
LTBP3-221ENST00000532932 CROCC2H7BZ55 1655 aa19.11■□□□□ 0.65
LTBP3-221ENST00000532932 SLC24A1O60721 1099 aa19.11■□□□□ 0.65
LTBP3-221ENST00000532932 IGHDP01880 384 aa19.11■□□□□ 0.65
LTBP3-221ENST00000532932 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
LTBP3-221ENST00000532932 SEC24BO95487 1268 aa19.09■□□□□ 0.65
LTBP3-221ENST00000532932 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.65
LTBP3-221ENST00000532932 COG6Q9Y2V7 657 aa19.08■□□□□ 0.64
LTBP3-221ENST00000532932 A2MP01023 1474 aa19.08■□□□□ 0.64
LTBP3-221ENST00000532932 BECN1Q14457 450 aa19.07■□□□□ 0.64
LTBP3-221ENST00000532932 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
LTBP3-221ENST00000532932 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
LTBP3-221ENST00000532932 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
LTBP3-221ENST00000532932 NUP160Q12769 1436 aa19.06■□□□□ 0.64
LTBP3-221ENST00000532932 INSRP06213 1382 aa19.06■□□□□ 0.64
LTBP3-221ENST00000532932 GPRASP1Q5JY77 1395 aa19.06■□□□□ 0.64
LTBP3-221ENST00000532932 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
LTBP3-221ENST00000532932 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
LTBP3-221ENST00000532932 ZNF521Q96K83 1311 aa19.05■□□□□ 0.64
LTBP3-221ENST00000532932 AMER1Q5JTC6 1135 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms