RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 ERICH6BQ5W0A0 696 aa24.74■■□□□ 1.55
UBXN1-213ENST00000532904 ZFYVE16Q7Z3T8 1539 aa24.74■■□□□ 1.55
UBXN1-213ENST00000532904 SPAG9O60271 1321 aaKnown RBP24.71■■□□□ 1.55
UBXN1-213ENST00000532904 INO80Q9ULG1 1556 aaPredicted RBP24.71■■□□□ 1.55
UBXN1-213ENST00000532904 C11orf95C9JLR9 678 aaPredicted RBP24.7■■□□□ 1.54
UBXN1-213ENST00000532904 PRKRIP1Q9H875 184 aaPredicted RBP24.7■■□□□ 1.54
UBXN1-213ENST00000532904 NBPF8Q3BBV2 869 aa24.68■■□□□ 1.54
UBXN1-213ENST00000532904 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
UBXN1-213ENST00000532904 ADGRL1O94910 1474 aa24.68■■□□□ 1.54
UBXN1-213ENST00000532904 CFAP74Q9C0B2 1584 aa24.68■■□□□ 1.54
UBXN1-213ENST00000532904 ATP7AQ04656 1500 aa24.66■■□□□ 1.54
UBXN1-213ENST00000532904 UHRF1BP1Q6BDS2 1440 aa24.66■■□□□ 1.54
UBXN1-213ENST00000532904 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
UBXN1-213ENST00000532904 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
UBXN1-213ENST00000532904 IRX6P78412 446 aaPredicted RBP24.65■■□□□ 1.54
UBXN1-213ENST00000532904 SCAPERQ9BY12 1400 aa24.64■■□□□ 1.54
UBXN1-213ENST00000532904 AFAP1Q8N556 730 aa24.64■■□□□ 1.53
UBXN1-213ENST00000532904 ATP10AO60312 1499 aa24.63■■□□□ 1.53
UBXN1-213ENST00000532904 DEPDC5O75140 1603 aa24.63■■□□□ 1.53
UBXN1-213ENST00000532904 FANCIQ9NVI1 1328 aa24.61■■□□□ 1.53
UBXN1-213ENST00000532904 PPP4R2Q9NY27 417 aa24.61■■□□□ 1.53
UBXN1-213ENST00000532904 ZBED9Q6R2W3 1325 aa24.61■■□□□ 1.53
UBXN1-213ENST00000532904 EIF2AK4Q9P2K8 1649 aaKnown RBP24.6■■□□□ 1.53
UBXN1-213ENST00000532904 MRS2Q9HD23 443 aa24.59■■□□□ 1.53
UBXN1-213ENST00000532904 CD109Q6YHK3 1445 aa24.59■■□□□ 1.53
UBXN1-213ENST00000532904 KIF7Q2M1P5 1343 aa24.59■■□□□ 1.53
UBXN1-213ENST00000532904 PLA2R1Q13018 1463 aa24.58■■□□□ 1.53
UBXN1-213ENST00000532904 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
UBXN1-213ENST00000532904 MSH5O43196 834 aa24.57■■□□□ 1.52
UBXN1-213ENST00000532904 ZNF518AQ6AHZ1 1483 aa24.57■■□□□ 1.52
UBXN1-213ENST00000532904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.57■■□□□ 1.52
UBXN1-213ENST00000532904 RALGAPBQ86X10 1494 aa24.56■■□□□ 1.52
UBXN1-213ENST00000532904 FAM9BQ8IZU0 186 aa24.56■■□□□ 1.52
UBXN1-213ENST00000532904 KIDINS220Q9ULH0 1771 aa24.54■■□□□ 1.52
UBXN1-213ENST00000532904 VWDEQ8N2E2 1590 aa24.53■■□□□ 1.52
UBXN1-213ENST00000532904 KDM5CP41229 1560 aa24.53■■□□□ 1.52
UBXN1-213ENST00000532904 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
UBXN1-213ENST00000532904 TET3O43151 1660 aa24.51■■□□□ 1.51
UBXN1-213ENST00000532904 NEO1Q92859 1461 aa24.5■■□□□ 1.51
UBXN1-213ENST00000532904 E9PCH4 1651 aa24.5■■□□□ 1.51
UBXN1-213ENST00000532904 POGZQ7Z3K3 1410 aa24.49■■□□□ 1.51
UBXN1-213ENST00000532904 PRDM15P57071 1507 aaPredicted RBP24.48■■□□□ 1.51
UBXN1-213ENST00000532904 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
UBXN1-213ENST00000532904 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
UBXN1-213ENST00000532904 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
UBXN1-213ENST00000532904 MLH3Q9UHC1 1453 aa24.46■■□□□ 1.51
UBXN1-213ENST00000532904 KANK1Q14678 1352 aa24.46■■□□□ 1.51
UBXN1-213ENST00000532904 GLI2P10070 1586 aa24.45■■□□□ 1.5
UBXN1-213ENST00000532904 MROH1Q8NDA8 1641 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 USP47Q96K76 1375 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 SPHKAPQ2M3C7 1700 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 MAP3K4Q9Y6R4 1608 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 TRPM2O94759 1503 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 PTPRTO14522 1441 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
UBXN1-213ENST00000532904 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
UBXN1-213ENST00000532904 RNF17Q9BXT8 1623 aaKnown RBP24.42■■□□□ 1.5
UBXN1-213ENST00000532904 PRAG1Q86YV5 1406 aa24.42■■□□□ 1.5
UBXN1-213ENST00000532904 TRPM1Q7Z4N2 1603 aa24.41■■□□□ 1.5
UBXN1-213ENST00000532904 ZNF326Q5BKZ1 582 aaKnown RBP24.41■■□□□ 1.5
UBXN1-213ENST00000532904 A2MP01023 1474 aa24.41■■□□□ 1.5
UBXN1-213ENST00000532904 BCORL1Q5H9F3 1711 aa24.41■■□□□ 1.5
UBXN1-213ENST00000532904 SMG6Q86US8 1419 aaKnown RBP24.4■■□□□ 1.5
UBXN1-213ENST00000532904 ARID4BQ4LE39 1312 aaPredicted RBP24.4■■□□□ 1.5
UBXN1-213ENST00000532904 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.49
UBXN1-213ENST00000532904 CEP152O94986 1710 aa24.38■■□□□ 1.49
UBXN1-213ENST00000532904 KIF3BO15066 747 aa24.38■■□□□ 1.49
UBXN1-213ENST00000532904 LAMC1P11047 1609 aa24.38■■□□□ 1.49
UBXN1-213ENST00000532904 LMTK2Q8IWU2 1503 aa24.37■■□□□ 1.49
UBXN1-213ENST00000532904 B4GALNT3Q6L9W6 998 aa24.37■■□□□ 1.49
UBXN1-213ENST00000532904 NEURL4Q96JN8 1562 aa24.36■■□□□ 1.49
UBXN1-213ENST00000532904 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
UBXN1-213ENST00000532904 CYB5RLQ6IPT4 315 aa24.36■■□□□ 1.49
UBXN1-213ENST00000532904 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
UBXN1-213ENST00000532904 GPRASP1Q5JY77 1395 aa24.34■■□□□ 1.49
UBXN1-213ENST00000532904 FRMPD1Q5SYB0 1578 aa24.33■■□□□ 1.49
UBXN1-213ENST00000532904 EFCAB6Q5THR3 1501 aa24.33■■□□□ 1.49
UBXN1-213ENST00000532904 RICTORQ6R327 1708 aa24.32■■□□□ 1.48
UBXN1-213ENST00000532904 STAC3Q96MF2 364 aa24.32■■□□□ 1.48
UBXN1-213ENST00000532904 CLTCL1P53675 1640 aa24.32■■□□□ 1.48
UBXN1-213ENST00000532904 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
UBXN1-213ENST00000532904 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
UBXN1-213ENST00000532904 ROCK2O75116 1388 aaKnown RBP24.31■■□□□ 1.48
UBXN1-213ENST00000532904 RNF123Q5XPI4 1314 aa24.31■■□□□ 1.48
UBXN1-213ENST00000532904 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
UBXN1-213ENST00000532904 BCL11AQ9H165 835 aa24.3■■□□□ 1.48
UBXN1-213ENST00000532904 NUDCQ9Y266 331 aa24.3■■□□□ 1.48
UBXN1-213ENST00000532904 PPRC1Q5VV67 1664 aaKnown RBP24.27■■□□□ 1.48
UBXN1-213ENST00000532904 DIP2BQ9P265 1576 aa24.27■■□□□ 1.48
UBXN1-213ENST00000532904 DIP2CQ9Y2E4 1556 aa24.24■■□□□ 1.47
UBXN1-213ENST00000532904 MADDQ8WXG6 1647 aa24.23■■□□□ 1.47
UBXN1-213ENST00000532904 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
UBXN1-213ENST00000532904 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
UBXN1-213ENST00000532904 KIF1BO60333 1816 aa24.22■■□□□ 1.47
UBXN1-213ENST00000532904 ST20-MTHFSA0A0A6YYL1 179 aa24.2■■□□□ 1.47
UBXN1-213ENST00000532904 RAPGEF3O95398 923 aa24.19■■□□□ 1.46
UBXN1-213ENST00000532904 ZMYM4Q5VZL5 1548 aa24.19■■□□□ 1.46
UBXN1-213ENST00000532904 KIAA1210Q9ULL0 1709 aa24.17■■□□□ 1.46
UBXN1-213ENST00000532904 NBPF1Q3BBV0 1214 aa24.17■■□□□ 1.46
UBXN1-213ENST00000532904 ABCC3O15438 1527 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms