RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 NAIPQ13075 1403 aa17.95■□□□□ 0.46
TRAF3IP2-212ENST00000532708 RIMS1Q86UR5 1692 aaKnown RBP17.95■□□□□ 0.46
TRAF3IP2-212ENST00000532708 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
TRAF3IP2-212ENST00000532708 RNF17Q9BXT8 1623 aaKnown RBP17.92■□□□□ 0.46
TRAF3IP2-212ENST00000532708 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
TRAF3IP2-212ENST00000532708 MROH1Q8NDA8 1641 aa17.92■□□□□ 0.46
TRAF3IP2-212ENST00000532708 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
TRAF3IP2-212ENST00000532708 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
TRAF3IP2-212ENST00000532708 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
TRAF3IP2-212ENST00000532708 PTPRMP28827 1452 aa17.9■□□□□ 0.46
TRAF3IP2-212ENST00000532708 GCC2Q8IWJ2 1684 aa17.9■□□□□ 0.46
TRAF3IP2-212ENST00000532708 DEPDC5O75140 1603 aa17.88■□□□□ 0.45
TRAF3IP2-212ENST00000532708 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
TRAF3IP2-212ENST00000532708 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
TRAF3IP2-212ENST00000532708 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
TRAF3IP2-212ENST00000532708 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
TRAF3IP2-212ENST00000532708 ZMYM3Q14202 1370 aa17.87■□□□□ 0.45
TRAF3IP2-212ENST00000532708 KDM5DQ9BY66 1539 aa17.87■□□□□ 0.45
TRAF3IP2-212ENST00000532708 KANK1Q14678 1352 aa17.86■□□□□ 0.45
TRAF3IP2-212ENST00000532708 CEP152O94986 1710 aa17.86■□□□□ 0.45
TRAF3IP2-212ENST00000532708 ABCC3O15438 1527 aa17.85■□□□□ 0.45
TRAF3IP2-212ENST00000532708 C3P01024 1663 aa17.84■□□□□ 0.45
TRAF3IP2-212ENST00000532708 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
TRAF3IP2-212ENST00000532708 NUP155O75694 1391 aa17.83■□□□□ 0.45
TRAF3IP2-212ENST00000532708 UNC13BO14795 1591 aa17.83■□□□□ 0.45
TRAF3IP2-212ENST00000532708 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
TRAF3IP2-212ENST00000532708 MROH2AA6NES4 1674 aa17.82■□□□□ 0.44
TRAF3IP2-212ENST00000532708 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
TRAF3IP2-212ENST00000532708 ZC3H13Q5T200 1668 aaKnown RBP17.81■□□□□ 0.44
TRAF3IP2-212ENST00000532708 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
TRAF3IP2-212ENST00000532708 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
TRAF3IP2-212ENST00000532708 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
TRAF3IP2-212ENST00000532708 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
TRAF3IP2-212ENST00000532708 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
TRAF3IP2-212ENST00000532708 LMTK2Q8IWU2 1503 aa17.77■□□□□ 0.43
TRAF3IP2-212ENST00000532708 IQGAP3Q86VI3 1631 aa17.76■□□□□ 0.43
TRAF3IP2-212ENST00000532708 PZPP20742 1482 aa17.76■□□□□ 0.43
TRAF3IP2-212ENST00000532708 NPATQ14207 1427 aa17.75■□□□□ 0.43
TRAF3IP2-212ENST00000532708 ARHGAP31Q2M1Z3 1444 aa17.73■□□□□ 0.43
TRAF3IP2-212ENST00000532708 EFCAB6Q5THR3 1501 aa17.73■□□□□ 0.43
TRAF3IP2-212ENST00000532708 TET3O43151 1660 aa17.73■□□□□ 0.43
TRAF3IP2-212ENST00000532708 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
TRAF3IP2-212ENST00000532708 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
TRAF3IP2-212ENST00000532708 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.43
TRAF3IP2-212ENST00000532708 E9PCH4 1651 aa17.7■□□□□ 0.42
TRAF3IP2-212ENST00000532708 ERVK-7P63135 1459 aa17.7■□□□□ 0.42
TRAF3IP2-212ENST00000532708 TNRQ92752 1358 aa17.7■□□□□ 0.42
TRAF3IP2-212ENST00000532708 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
TRAF3IP2-212ENST00000532708 PREX1Q8TCU6 1659 aa17.69■□□□□ 0.42
TRAF3IP2-212ENST00000532708 PKD2Q13563 968 aa17.69■□□□□ 0.42
TRAF3IP2-212ENST00000532708 HRCP23327 699 aa17.68■□□□□ 0.42
TRAF3IP2-212ENST00000532708 FOXD1Q16676 465 aa17.68■□□□□ 0.42
TRAF3IP2-212ENST00000532708 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
TRAF3IP2-212ENST00000532708 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
TRAF3IP2-212ENST00000532708 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
TRAF3IP2-212ENST00000532708 UHRF1BP1Q6BDS2 1440 aa17.66■□□□□ 0.42
TRAF3IP2-212ENST00000532708 NOS1P29475 1434 aa17.65■□□□□ 0.42
TRAF3IP2-212ENST00000532708 LMTK3Q96Q04 1460 aa17.64■□□□□ 0.41
TRAF3IP2-212ENST00000532708 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
TRAF3IP2-212ENST00000532708 HSPA2P54652 639 aa17.64■□□□□ 0.41
TRAF3IP2-212ENST00000532708 SYNMO15061 1565 aa17.63■□□□□ 0.41
TRAF3IP2-212ENST00000532708 IDI1Q13907 227 aa17.62■□□□□ 0.41
TRAF3IP2-212ENST00000532708 UGGT1Q9NYU2 1555 aa17.6■□□□□ 0.41
TRAF3IP2-212ENST00000532708 CEP170BQ9Y4F5 1589 aaPredicted RBP17.6■□□□□ 0.41
TRAF3IP2-212ENST00000532708 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
TRAF3IP2-212ENST00000532708 SPHKAPQ2M3C7 1700 aa17.59■□□□□ 0.41
TRAF3IP2-212ENST00000532708 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
TRAF3IP2-212ENST00000532708 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
TRAF3IP2-212ENST00000532708 PTPRTO14522 1441 aa17.58■□□□□ 0.41
TRAF3IP2-212ENST00000532708 PLA2R1Q13018 1463 aa17.58■□□□□ 0.4
TRAF3IP2-212ENST00000532708 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
TRAF3IP2-212ENST00000532708 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
TRAF3IP2-212ENST00000532708 PIK3C2BO00750 1634 aa17.56■□□□□ 0.4
TRAF3IP2-212ENST00000532708 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
TRAF3IP2-212ENST00000532708 TRPM2O94759 1503 aa17.54■□□□□ 0.4
TRAF3IP2-212ENST00000532708 THEMISQ8N1K5 641 aaPredicted RBP17.53■□□□□ 0.4
TRAF3IP2-212ENST00000532708 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
TRAF3IP2-212ENST00000532708 CLTCL1P53675 1640 aa17.52■□□□□ 0.39
TRAF3IP2-212ENST00000532708 MYO5BQ9ULV0 1848 aa17.49■□□□□ 0.39
TRAF3IP2-212ENST00000532708 ADGRB3O60242 1522 aa17.49■□□□□ 0.39
TRAF3IP2-212ENST00000532708 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
TRAF3IP2-212ENST00000532708 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
TRAF3IP2-212ENST00000532708 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
TRAF3IP2-212ENST00000532708 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
TRAF3IP2-212ENST00000532708 CCDC144AA2RUR9 1427 aa17.48■□□□□ 0.39
TRAF3IP2-212ENST00000532708 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 KIF1BO60333 1816 aa17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 LTKP29376 864 aa17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 ANKLE2Q86XL3 938 aa17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
TRAF3IP2-212ENST00000532708 NUTM2DQ5VT03 806 aaPredicted RBP17.44■□□□□ 0.38
TRAF3IP2-212ENST00000532708 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
TRAF3IP2-212ENST00000532708 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
TRAF3IP2-212ENST00000532708 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
TRAF3IP2-212ENST00000532708 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
TRAF3IP2-212ENST00000532708 SLIT1O75093 1534 aa17.42■□□□□ 0.38
TRAF3IP2-212ENST00000532708 ARHGAP23Q9P227 1491 aa17.42■□□□□ 0.38
TRAF3IP2-212ENST00000532708 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms