RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
LINC00958-206ENST00000532541 TNRQ92752 1358 aa12.62□□□□□ -0.39
LINC00958-206ENST00000532541 KDM5DQ9BY66 1539 aa12.62□□□□□ -0.39
LINC00958-206ENST00000532541 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
LINC00958-206ENST00000532541 PLA2R1Q13018 1463 aa12.61□□□□□ -0.39
LINC00958-206ENST00000532541 A2ML1A8K2U0 1454 aa12.6□□□□□ -0.39
LINC00958-206ENST00000532541 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
LINC00958-206ENST00000532541 DNMT1P26358 1616 aaKnown RBP12.6□□□□□ -0.39
LINC00958-206ENST00000532541 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
LINC00958-206ENST00000532541 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
LINC00958-206ENST00000532541 SPATA31D1Q6ZQQ2 1576 aa12.59□□□□□ -0.39
LINC00958-206ENST00000532541 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
LINC00958-206ENST00000532541 ARHGEF5Q12774 1597 aa12.58□□□□□ -0.4
LINC00958-206ENST00000532541 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
LINC00958-206ENST00000532541 PZPP20742 1482 aa12.58□□□□□ -0.4
LINC00958-206ENST00000532541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00958-206ENST00000532541 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
LINC00958-206ENST00000532541 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
LINC00958-206ENST00000532541 APLP2Q06481 763 aa12.57□□□□□ -0.4
LINC00958-206ENST00000532541 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
LINC00958-206ENST00000532541 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
LINC00958-206ENST00000532541 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
LINC00958-206ENST00000532541 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
LINC00958-206ENST00000532541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC00958-206ENST00000532541 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
LINC00958-206ENST00000532541 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
LINC00958-206ENST00000532541 MIA2Q96PC5 1412 aa12.54□□□□□ -0.4
LINC00958-206ENST00000532541 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
LINC00958-206ENST00000532541 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
LINC00958-206ENST00000532541 THEMISQ8N1K5 641 aaPredicted RBP12.53□□□□□ -0.4
LINC00958-206ENST00000532541 CEP152O94986 1710 aa12.53□□□□□ -0.4
LINC00958-206ENST00000532541 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.41
LINC00958-206ENST00000532541 ABCC3O15438 1527 aa12.52□□□□□ -0.41
LINC00958-206ENST00000532541 MAST1Q9Y2H9 1570 aa12.52□□□□□ -0.41
LINC00958-206ENST00000532541 NPHP4O75161 1426 aaPredicted RBP12.51□□□□□ -0.41
LINC00958-206ENST00000532541 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
LINC00958-206ENST00000532541 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
LINC00958-206ENST00000532541 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
LINC00958-206ENST00000532541 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
LINC00958-206ENST00000532541 EIF2AK4Q9P2K8 1649 aaKnown RBP12.49□□□□□ -0.41
LINC00958-206ENST00000532541 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
LINC00958-206ENST00000532541 CHIC2Q9UKJ5 165 aa12.49□□□□□ -0.41
LINC00958-206ENST00000532541 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 CPS1P31327 1500 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 ERVK-7P63135 1459 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 TOM1O60784 492 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 HSPA1LP34931 641 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 MROH1Q8NDA8 1641 aa12.48□□□□□ -0.41
LINC00958-206ENST00000532541 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
LINC00958-206ENST00000532541 SOCS7O14512 581 aa12.47□□□□□ -0.41
LINC00958-206ENST00000532541 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
LINC00958-206ENST00000532541 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
LINC00958-206ENST00000532541 VWDEQ8N2E2 1590 aa12.46□□□□□ -0.42
LINC00958-206ENST00000532541 ABCC5O15440 1437 aa12.45□□□□□ -0.42
LINC00958-206ENST00000532541 DEPDC5O75140 1603 aa12.44□□□□□ -0.42
LINC00958-206ENST00000532541 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
LINC00958-206ENST00000532541 DAPK1P53355 1430 aa12.44□□□□□ -0.42
LINC00958-206ENST00000532541 KANK1Q14678 1352 aa12.43□□□□□ -0.42
LINC00958-206ENST00000532541 UBR1Q8IWV7 1749 aa12.43□□□□□ -0.42
LINC00958-206ENST00000532541 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
LINC00958-206ENST00000532541 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
LINC00958-206ENST00000532541 MED14O60244 1454 aa12.42□□□□□ -0.42
LINC00958-206ENST00000532541 SCAF11Q99590 1463 aaKnown RBP12.42□□□□□ -0.42
LINC00958-206ENST00000532541 ERBINQ96RT1 1412 aa12.42□□□□□ -0.42
LINC00958-206ENST00000532541 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
LINC00958-206ENST00000532541 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
LINC00958-206ENST00000532541 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
LINC00958-206ENST00000532541 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
LINC00958-206ENST00000532541 ANKRD30AQ9BXX3 1397 aa12.41□□□□□ -0.42
LINC00958-206ENST00000532541 LTKP29376 864 aa12.4□□□□□ -0.42
LINC00958-206ENST00000532541 BCANQ96GW7 911 aa12.4□□□□□ -0.42
LINC00958-206ENST00000532541 PIK3C2BO00750 1634 aa12.4□□□□□ -0.42
LINC00958-206ENST00000532541 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
LINC00958-206ENST00000532541 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
LINC00958-206ENST00000532541 SYNMO15061 1565 aa12.36□□□□□ -0.43
LINC00958-206ENST00000532541 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
LINC00958-206ENST00000532541 IDI1Q13907 227 aa12.35□□□□□ -0.43
LINC00958-206ENST00000532541 RBM33Q96EV2 1170 aaKnown RBP12.35□□□□□ -0.43
LINC00958-206ENST00000532541 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
LINC00958-206ENST00000532541 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
LINC00958-206ENST00000532541 SLIT1O75093 1534 aa12.34□□□□□ -0.43
LINC00958-206ENST00000532541 EFCAB6Q5THR3 1501 aa12.34□□□□□ -0.43
LINC00958-206ENST00000532541 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
LINC00958-206ENST00000532541 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
LINC00958-206ENST00000532541 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
LINC00958-206ENST00000532541 ITGAEP38570 1179 aa12.33□□□□□ -0.44
LINC00958-206ENST00000532541 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
LINC00958-206ENST00000532541 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
LINC00958-206ENST00000532541 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-206ENST00000532541 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-206ENST00000532541 ADGRB3O60242 1522 aa12.3□□□□□ -0.44
LINC00958-206ENST00000532541 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
LINC00958-206ENST00000532541 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
LINC00958-206ENST00000532541 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
LINC00958-206ENST00000532541 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
LINC00958-206ENST00000532541 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
LINC00958-206ENST00000532541 NOS1P29475 1434 aa12.28□□□□□ -0.44
LINC00958-206ENST00000532541 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms