RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
PPFIA1-222ENST00000532504 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
PPFIA1-222ENST00000532504 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
PPFIA1-222ENST00000532504 POGZQ7Z3K3 1410 aa20.48■□□□□ 0.87
PPFIA1-222ENST00000532504 MIA2Q96PC5 1412 aa20.48■□□□□ 0.87
PPFIA1-222ENST00000532504 PANK3Q9H999 370 aa20.48■□□□□ 0.87
PPFIA1-222ENST00000532504 PROSER2Q86WR7 435 aaPredicted RBP20.46■□□□□ 0.87
PPFIA1-222ENST00000532504 CFAP70Q5T0N1 1121 aa20.46■□□□□ 0.87
PPFIA1-222ENST00000532504 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
PPFIA1-222ENST00000532504 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
PPFIA1-222ENST00000532504 ADGRL1O94910 1474 aa20.44■□□□□ 0.86
PPFIA1-222ENST00000532504 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
PPFIA1-222ENST00000532504 EVA1CP58658 441 aa20.44■□□□□ 0.86
PPFIA1-222ENST00000532504 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
PPFIA1-222ENST00000532504 COG3Q96JB2 828 aa20.43■□□□□ 0.86
PPFIA1-222ENST00000532504 USP47Q96K76 1375 aa20.43■□□□□ 0.86
PPFIA1-222ENST00000532504 CENPJQ9HC77 1338 aaPredicted RBP20.42■□□□□ 0.86
PPFIA1-222ENST00000532504 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
PPFIA1-222ENST00000532504 UPF2Q9HAU5 1272 aaKnown RBP20.42■□□□□ 0.86
PPFIA1-222ENST00000532504 RALBP1Q15311 655 aa20.41■□□□□ 0.86
PPFIA1-222ENST00000532504 MEX3CQ5U5Q3 659 aaKnown RBP20.41■□□□□ 0.86
PPFIA1-222ENST00000532504 DAPK1P53355 1430 aa20.4■□□□□ 0.86
PPFIA1-222ENST00000532504 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
PPFIA1-222ENST00000532504 HSP90AA1P07900 732 aaKnown RBP20.4■□□□□ 0.86
PPFIA1-222ENST00000532504 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
PPFIA1-222ENST00000532504 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
PPFIA1-222ENST00000532504 CABP2Q9NPB3 220 aa20.39■□□□□ 0.85
PPFIA1-222ENST00000532504 SLC52A1Q9NWF4 448 aa20.38■□□□□ 0.85
PPFIA1-222ENST00000532504 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
PPFIA1-222ENST00000532504 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
PPFIA1-222ENST00000532504 ASXL2Q76L83 1435 aa20.36■□□□□ 0.85
PPFIA1-222ENST00000532504 ANP32AP39687 249 aaKnown RBP20.35■□□□□ 0.85
PPFIA1-222ENST00000532504 SUPT6HQ7KZ85 1726 aaKnown RBP20.35■□□□□ 0.85
PPFIA1-222ENST00000532504 CGNL1Q0VF96 1302 aa20.35■□□□□ 0.85
PPFIA1-222ENST00000532504 ESCO1Q5FWF5 840 aa20.34■□□□□ 0.85
PPFIA1-222ENST00000532504 WDR62O43379 1518 aa20.34■□□□□ 0.85
PPFIA1-222ENST00000532504 FANCAO15360 1455 aa20.34■□□□□ 0.85
PPFIA1-222ENST00000532504 FBXO31Q5XUX0 539 aaPredicted RBP20.33■□□□□ 0.85
PPFIA1-222ENST00000532504 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.85
PPFIA1-222ENST00000532504 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.84
PPFIA1-222ENST00000532504 PRAM1Q96QH2 718 aa20.32■□□□□ 0.84
PPFIA1-222ENST00000532504 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
PPFIA1-222ENST00000532504 DENND4BO75064 1496 aaPredicted RBP20.32■□□□□ 0.84
PPFIA1-222ENST00000532504 KIF14Q15058 1648 aa20.32■□□□□ 0.84
PPFIA1-222ENST00000532504 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
PPFIA1-222ENST00000532504 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
PPFIA1-222ENST00000532504 NBPF1Q3BBV0 1214 aa20.3■□□□□ 0.84
PPFIA1-222ENST00000532504 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
PPFIA1-222ENST00000532504 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
PPFIA1-222ENST00000532504 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
PPFIA1-222ENST00000532504 ATP10BO94823 1461 aa20.28■□□□□ 0.84
PPFIA1-222ENST00000532504 CCER2I3L3R5 266 aa20.28■□□□□ 0.84
PPFIA1-222ENST00000532504 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
PPFIA1-222ENST00000532504 AKNAQ7Z591 1439 aa20.27■□□□□ 0.84
PPFIA1-222ENST00000532504 NLRP6P59044 892 aa20.26■□□□□ 0.83
PPFIA1-222ENST00000532504 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
PPFIA1-222ENST00000532504 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
PPFIA1-222ENST00000532504 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
PPFIA1-222ENST00000532504 CALD1Q05682 793 aaKnown RBP20.25■□□□□ 0.83
PPFIA1-222ENST00000532504 HFM1A2PYH4 1435 aa20.24■□□□□ 0.83
PPFIA1-222ENST00000532504 ERBINQ96RT1 1412 aa20.23■□□□□ 0.83
PPFIA1-222ENST00000532504 ABCC5O15440 1437 aa20.22■□□□□ 0.83
PPFIA1-222ENST00000532504 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
PPFIA1-222ENST00000532504 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
PPFIA1-222ENST00000532504 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
PPFIA1-222ENST00000532504 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
PPFIA1-222ENST00000532504 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
PPFIA1-222ENST00000532504 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
PPFIA1-222ENST00000532504 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
PPFIA1-222ENST00000532504 MS4A1P11836 297 aa20.2■□□□□ 0.82
PPFIA1-222ENST00000532504 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
PPFIA1-222ENST00000532504 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
PPFIA1-222ENST00000532504 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
PPFIA1-222ENST00000532504 STK31Q9BXU1 1019 aa20.18■□□□□ 0.82
PPFIA1-222ENST00000532504 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
PPFIA1-222ENST00000532504 GPRASP1Q5JY77 1395 aa20.18■□□□□ 0.82
PPFIA1-222ENST00000532504 IDI1Q13907 227 aa20.17■□□□□ 0.82
PPFIA1-222ENST00000532504 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
PPFIA1-222ENST00000532504 NUP153P49790 1475 aaKnown RBP20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 RGS3P49796 1198 aa20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 MYBBP1AQ9BQG0 1328 aaKnown RBP20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 APBB1O00213 710 aa20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
PPFIA1-222ENST00000532504 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
PPFIA1-222ENST00000532504 RAPGEF6Q8TEU7 1601 aa20.15■□□□□ 0.82
PPFIA1-222ENST00000532504 NAIPQ13075 1403 aa20.15■□□□□ 0.82
PPFIA1-222ENST00000532504 DIAPH1O60610 1272 aaKnown RBP20.14■□□□□ 0.82
PPFIA1-222ENST00000532504 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.82
PPFIA1-222ENST00000532504 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
PPFIA1-222ENST00000532504 NBPF8Q3BBV2 869 aa20.14■□□□□ 0.81
PPFIA1-222ENST00000532504 ROCK1Q13464 1354 aa20.14■□□□□ 0.81
PPFIA1-222ENST00000532504 MSH5O43196 834 aa20.13■□□□□ 0.81
PPFIA1-222ENST00000532504 TEFQ10587 303 aa20.13■□□□□ 0.81
PPFIA1-222ENST00000532504 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
PPFIA1-222ENST00000532504 PLCH2O75038 1416 aa20.13■□□□□ 0.81
PPFIA1-222ENST00000532504 TEX14Q8IWB6 1497 aa20.13■□□□□ 0.81
PPFIA1-222ENST00000532504 NUP160Q12769 1436 aa20.13■□□□□ 0.81
PPFIA1-222ENST00000532504 KIF7Q2M1P5 1343 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms