RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CNTLNQ9NXG0 1405 aa31.6■■■□□ 2.65
CCS-207ENST00000531990 ROCK1Q13464 1354 aa31.58■■■□□ 2.65
CCS-207ENST00000531990 RNF17Q9BXT8 1623 aaKnown RBP31.57■■■□□ 2.64
CCS-207ENST00000531990 CLTCQ00610 1675 aaKnown RBP31.55■■■□□ 2.64
CCS-207ENST00000531990 PLPPR3Q6T4P5 718 aa31.55■■■□□ 2.64
CCS-207ENST00000531990 MROH2AA6NES4 1674 aa31.54■■■□□ 2.64
CCS-207ENST00000531990 FAM135AQ9P2D6 1515 aa31.53■■■□□ 2.64
CCS-207ENST00000531990 ANKRD50Q9ULJ7 1429 aa31.5■■■□□ 2.63
CCS-207ENST00000531990 C3P01024 1663 aa31.5■■■□□ 2.63
CCS-207ENST00000531990 KDM5DQ9BY66 1539 aa31.49■■■□□ 2.63
CCS-207ENST00000531990 WASHC2CQ9Y4E1 1318 aa31.48■■■□□ 2.63
CCS-207ENST00000531990 CEBPAP49715 358 aaPredicted RBP31.46■■■□□ 2.63
CCS-207ENST00000531990 ZMYM3Q14202 1370 aa31.45■■■□□ 2.63
CCS-207ENST00000531990 DEPDC5O75140 1603 aa31.45■■■□□ 2.62
CCS-207ENST00000531990 MROH1Q8NDA8 1641 aa31.45■■■□□ 2.62
CCS-207ENST00000531990 ZC3H13Q5T200 1668 aaKnown RBP31.44■■■□□ 2.62
CCS-207ENST00000531990 PRDM15P57071 1507 aaPredicted RBP31.43■■■□□ 2.62
CCS-207ENST00000531990 KANK1Q14678 1352 aa31.42■■■□□ 2.62
CCS-207ENST00000531990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.41■■■□□ 2.624e-8■□□□□ 8.4
CCS-207ENST00000531990 ABCC3O15438 1527 aa31.39■■■□□ 2.61
CCS-207ENST00000531990 CEP152O94986 1710 aa31.38■■■□□ 2.61
CCS-207ENST00000531990 GCC2Q8IWJ2 1684 aa31.35■■■□□ 2.61
CCS-207ENST00000531990 SETD1BQ9UPS6 1966 aaKnown RBP31.35■■■□□ 2.61
CCS-207ENST00000531990 NPATQ14207 1427 aa31.33■■■□□ 2.61
CCS-207ENST00000531990 CAMSAP1Q5T5Y3 1602 aa31.32■■■□□ 2.6
CCS-207ENST00000531990 NAIPQ13075 1403 aa31.32■■■□□ 2.6
CCS-207ENST00000531990 PREX1Q8TCU6 1659 aa31.32■■■□□ 2.6
CCS-207ENST00000531990 UNC13BO14795 1591 aa31.31■■■□□ 2.6
CCS-207ENST00000531990 PZPP20742 1482 aa31.3■■■□□ 2.6
CCS-207ENST00000531990 HFM1A2PYH4 1435 aa31.3■■■□□ 2.6
CCS-207ENST00000531990 VWDEQ8N2E2 1590 aa31.29■■■□□ 2.6
CCS-207ENST00000531990 LMTK2Q8IWU2 1503 aa31.25■■■□□ 2.59
CCS-207ENST00000531990 UHRF1BP1Q6BDS2 1440 aa31.24■■■□□ 2.59
CCS-207ENST00000531990 LMTK3Q96Q04 1460 aa31.22■■■□□ 2.59
CCS-207ENST00000531990 FBXO31Q5XUX0 539 aaPredicted RBP31.2■■■□□ 2.59
CCS-207ENST00000531990 ARHGAP31Q2M1Z3 1444 aa31.2■■■□□ 2.59
CCS-207ENST00000531990 NUP155O75694 1391 aa31.19■■■□□ 2.58
CCS-207ENST00000531990 IQGAP3Q86VI3 1631 aa31.19■■■□□ 2.58
CCS-207ENST00000531990 CFAP65Q6ZU64 1925 aaKnown RBP31.18■■■□□ 2.58
CCS-207ENST00000531990 TET3O43151 1660 aa31.18■■■□□ 2.58
CCS-207ENST00000531990 TNRQ92752 1358 aa31.17■■■□□ 2.58
CCS-207ENST00000531990 EFCAB6Q5THR3 1501 aa31.17■■■□□ 2.58
CCS-207ENST00000531990 MYO3AQ8NEV4 1616 aa31.16■■■□□ 2.58
CCS-207ENST00000531990 ERVK-7P63135 1459 aa31.14■■■□□ 2.58
CCS-207ENST00000531990 SPATA31D1Q6ZQQ2 1576 aa31.14■■■□□ 2.58
CCS-207ENST00000531990 ZNF142P52746 1687 aaPredicted RBP31.1■■■□□ 2.57
CCS-207ENST00000531990 RPRD2Q5VT52 1461 aaKnown RBP31.09■■■□□ 2.57
CCS-207ENST00000531990 TRIM52Q96A61 297 aa31.09■■■□□ 2.57
CCS-207ENST00000531990 CEP170BQ9Y4F5 1589 aaPredicted RBP31.09■■■□□ 2.57
CCS-207ENST00000531990 SETD5Q9C0A6 1442 aa31.08■■■□□ 2.57
CCS-207ENST00000531990 HSPA2P54652 639 aa31.08■■■□□ 2.57
CCS-207ENST00000531990 NLRP1Q9C000 1473 aa31.07■■■□□ 2.56
CCS-207ENST00000531990 A2ML1A8K2U0 1454 aa31.06■■■□□ 2.56
CCS-207ENST00000531990 ACIN1Q9UKV3 1341 aaKnown RBP31.04■■■□□ 2.56
CCS-207ENST00000531990 E9PCH4 1651 aa31.04■■■□□ 2.56
CCS-207ENST00000531990 NOS1P29475 1434 aa30.99■■■□□ 2.55
CCS-207ENST00000531990 RAB3GAP2Q9H2M9 1393 aa30.96■■■□□ 2.55
CCS-207ENST00000531990 SYNMO15061 1565 aa30.96■■■□□ 2.55
CCS-207ENST00000531990 SLC4A1APQ9BWU0 796 aaKnown RBP30.95■■■□□ 2.55
CCS-207ENST00000531990 UGGT1Q9NYU2 1555 aa30.95■■■□□ 2.54
CCS-207ENST00000531990 THEMISQ8N1K5 641 aaPredicted RBP30.92■■■□□ 2.54
CCS-207ENST00000531990 SLC52A1Q9NWF4 448 aa30.92■■■□□ 2.54
CCS-207ENST00000531990 PIK3C2BO00750 1634 aa30.9■■■□□ 2.54
CCS-207ENST00000531990 SPHKAPQ2M3C7 1700 aa30.89■■■□□ 2.54
CCS-207ENST00000531990 PLA2R1Q13018 1463 aa30.89■■■□□ 2.53
CCS-207ENST00000531990 UBR1Q8IWV7 1749 aa30.88■■■□□ 2.53
CCS-207ENST00000531990 PKD2Q13563 968 aa30.88■■■□□ 2.53
CCS-207ENST00000531990 STAG3Q9UJ98 1225 aa30.88■■■□□ 2.53
CCS-207ENST00000531990 TRIM26Q12899 539 aaPredicted RBP30.87■■■□□ 2.53
CCS-207ENST00000531990 IDI1Q13907 227 aa30.86■■■□□ 2.53
CCS-207ENST00000531990 STRCQ7RTU9 1775 aa30.86■■■□□ 2.53
CCS-207ENST00000531990 HRCP23327 699 aa30.85■■■□□ 2.53
CCS-207ENST00000531990 KDM5AP29375 1690 aaKnown RBP30.84■■■□□ 2.53
CCS-207ENST00000531990 MPHOSPH9Q99550 1183 aa30.83■■■□□ 2.53
CCS-207ENST00000531990 DMRT2Q9Y5R5 561 aa30.82■■■□□ 2.52
CCS-207ENST00000531990 PTPRTO14522 1441 aa30.81■■■□□ 2.52
CCS-207ENST00000531990 ADGRB3O60242 1522 aa30.8■■■□□ 2.52
CCS-207ENST00000531990 POLR1AO95602 1720 aaPredicted RBP30.78■■■□□ 2.52
CCS-207ENST00000531990 ANKLE2Q86XL3 938 aa30.78■■■□□ 2.52
CCS-207ENST00000531990 TRPM2O94759 1503 aa30.78■■■□□ 2.52
CCS-207ENST00000531990 NCKAP5LQ9HCH0 1330 aa30.76■■■□□ 2.52
CCS-207ENST00000531990 CHGAP10645 457 aaKnown RBP30.74■■■□□ 2.51
CCS-207ENST00000531990 TMEM131LA2VDJ0 1609 aa30.73■■■□□ 2.51
CCS-207ENST00000531990 SLIT1O75093 1534 aa30.73■■■□□ 2.51
CCS-207ENST00000531990 MYO5BQ9ULV0 1848 aa30.72■■■□□ 2.51
CCS-207ENST00000531990 FOXD1Q16676 465 aa30.71■■■□□ 2.51
CCS-207ENST00000531990 ARHGAP23Q9P227 1491 aa30.7■■■□□ 2.51
CCS-207ENST00000531990 TMEM2Q9UHN6 1383 aa30.7■■■□□ 2.51
CCS-207ENST00000531990 EID1Q9Y6B2 187 aa30.7■■■□□ 2.51
CCS-207ENST00000531990 CLTCL1P53675 1640 aa30.69■■■□□ 2.5
CCS-207ENST00000531990 KIF1BO60333 1816 aa30.67■■■□□ 2.5
CCS-207ENST00000531990 SCAF11Q99590 1463 aaKnown RBP30.66■■■□□ 2.5
CCS-207ENST00000531990 TXNDC2Q86VQ3 553 aa30.66■■■□□ 2.5
CCS-207ENST00000531990 NEURL4Q96JN8 1562 aa30.66■■■□□ 2.5
CCS-207ENST00000531990 HDGFP51858 240 aaKnown RBP30.63■■■□□ 2.49
CCS-207ENST00000531990 MED14O60244 1454 aa30.63■■■□□ 2.49
CCS-207ENST00000531990 CCDC144AA2RUR9 1427 aa30.62■■■□□ 2.49
CCS-207ENST00000531990 NPHP4O75161 1426 aaPredicted RBP30.62■■■□□ 2.49
CCS-207ENST00000531990 LTKP29376 864 aa30.61■■■□□ 2.49
CCS-207ENST00000531990 IQGAP1P46940 1657 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms