RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 C3P01024 1663 aa25.99■■□□□ 1.75
CAPRIN1-210ENST00000531668 PTPRKQ15262 1439 aa25.98■■□□□ 1.75
CAPRIN1-210ENST00000531668 NCOA1Q15788 1441 aa25.98■■□□□ 1.75
CAPRIN1-210ENST00000531668 RRBP1Q9P2E9 1410 aaKnown RBP25.95■■□□□ 1.74
CAPRIN1-210ENST00000531668 EIF2AK4Q9P2K8 1649 aaKnown RBP25.94■■□□□ 1.74
CAPRIN1-210ENST00000531668 ERBINQ96RT1 1412 aa25.94■■□□□ 1.74
CAPRIN1-210ENST00000531668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.94■■□□□ 1.74
CAPRIN1-210ENST00000531668 ADGRL2O95490 1459 aa25.93■■□□□ 1.74
CAPRIN1-210ENST00000531668 MROH2AA6NES4 1674 aa25.92■■□□□ 1.74
CAPRIN1-210ENST00000531668 HSPA2P54652 639 aa25.91■■□□□ 1.74
CAPRIN1-210ENST00000531668 KDM5DQ9BY66 1539 aa25.91■■□□□ 1.74
CAPRIN1-210ENST00000531668 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.74
CAPRIN1-210ENST00000531668 ANKRD50Q9ULJ7 1429 aa25.88■■□□□ 1.73
CAPRIN1-210ENST00000531668 LMTK3Q96Q04 1460 aa25.87■■□□□ 1.73
CAPRIN1-210ENST00000531668 KANK1Q14678 1352 aa25.86■■□□□ 1.73
CAPRIN1-210ENST00000531668 FBXO31Q5XUX0 539 aaPredicted RBP25.86■■□□□ 1.73
CAPRIN1-210ENST00000531668 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
CAPRIN1-210ENST00000531668 SETD1BQ9UPS6 1966 aaKnown RBP25.85■■□□□ 1.73
CAPRIN1-210ENST00000531668 ROCK1Q13464 1354 aa25.84■■□□□ 1.73
CAPRIN1-210ENST00000531668 PREX1Q8TCU6 1659 aa25.84■■□□□ 1.73
CAPRIN1-210ENST00000531668 MROH1Q8NDA8 1641 aa25.83■■□□□ 1.73
CAPRIN1-210ENST00000531668 ABCC3O15438 1527 aa25.83■■□□□ 1.72
CAPRIN1-210ENST00000531668 CEP152O94986 1710 aa25.83■■□□□ 1.72
CAPRIN1-210ENST00000531668 NPATQ14207 1427 aa25.81■■□□□ 1.72
CAPRIN1-210ENST00000531668 FAM135AQ9P2D6 1515 aa25.81■■□□□ 1.72
CAPRIN1-210ENST00000531668 ZC3H13Q5T200 1668 aaKnown RBP25.78■■□□□ 1.72
CAPRIN1-210ENST00000531668 PZPP20742 1482 aa25.78■■□□□ 1.72
CAPRIN1-210ENST00000531668 PRDM15P57071 1507 aaPredicted RBP25.78■■□□□ 1.72
CAPRIN1-210ENST00000531668 CFAP65Q6ZU64 1925 aaKnown RBP25.77■■□□□ 1.72
CAPRIN1-210ENST00000531668 DEPDC5O75140 1603 aa25.75■■□□□ 1.71
CAPRIN1-210ENST00000531668 TNRQ92752 1358 aa25.75■■□□□ 1.71
CAPRIN1-210ENST00000531668 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
CAPRIN1-210ENST00000531668 MYO3AQ8NEV4 1616 aa25.7■■□□□ 1.7
CAPRIN1-210ENST00000531668 NUP155O75694 1391 aa25.68■■□□□ 1.7
CAPRIN1-210ENST00000531668 ERVK-7P63135 1459 aa25.66■■□□□ 1.7
CAPRIN1-210ENST00000531668 NAIPQ13075 1403 aa25.65■■□□□ 1.7
CAPRIN1-210ENST00000531668 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
CAPRIN1-210ENST00000531668 CEP170BQ9Y4F5 1589 aaPredicted RBP25.65■■□□□ 1.7
CAPRIN1-210ENST00000531668 TRIM52Q96A61 297 aa25.64■■□□□ 1.7
CAPRIN1-210ENST00000531668 UNC13BO14795 1591 aa25.64■■□□□ 1.69
CAPRIN1-210ENST00000531668 LMTK2Q8IWU2 1503 aa25.63■■□□□ 1.69
CAPRIN1-210ENST00000531668 ARHGAP31Q2M1Z3 1444 aa25.62■■□□□ 1.69
CAPRIN1-210ENST00000531668 A2ML1A8K2U0 1454 aa25.61■■□□□ 1.69
CAPRIN1-210ENST00000531668 GCC2Q8IWJ2 1684 aa25.61■■□□□ 1.69
CAPRIN1-210ENST00000531668 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
CAPRIN1-210ENST00000531668 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
CAPRIN1-210ENST00000531668 ZNF142P52746 1687 aaPredicted RBP25.59■■□□□ 1.69
CAPRIN1-210ENST00000531668 EFCAB6Q5THR3 1501 aa25.58■■□□□ 1.69
CAPRIN1-210ENST00000531668 NLRP1Q9C000 1473 aa25.58■■□□□ 1.69
CAPRIN1-210ENST00000531668 NCKAP5LQ9HCH0 1330 aa25.58■■□□□ 1.69
CAPRIN1-210ENST00000531668 STAG3Q9UJ98 1225 aa25.57■■□□□ 1.68
CAPRIN1-210ENST00000531668 TET3O43151 1660 aa25.56■■□□□ 1.68
CAPRIN1-210ENST00000531668 THEMISQ8N1K5 641 aaPredicted RBP25.55■■□□□ 1.68
CAPRIN1-210ENST00000531668 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
CAPRIN1-210ENST00000531668 UGGT1Q9NYU2 1555 aa25.54■■□□□ 1.68
CAPRIN1-210ENST00000531668 DMRT2Q9Y5R5 561 aa25.54■■□□□ 1.68
CAPRIN1-210ENST00000531668 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
CAPRIN1-210ENST00000531668 IDI1Q13907 227 aa25.5■■□□□ 1.67
CAPRIN1-210ENST00000531668 RPRD2Q5VT52 1461 aaKnown RBP25.49■■□□□ 1.67
CAPRIN1-210ENST00000531668 E9PCH4 1651 aa25.48■■□□□ 1.67
CAPRIN1-210ENST00000531668 PKD2Q13563 968 aa25.48■■□□□ 1.67
CAPRIN1-210ENST00000531668 NOS1P29475 1434 aa25.47■■□□□ 1.67
CAPRIN1-210ENST00000531668 CHGAP10645 457 aaKnown RBP25.47■■□□□ 1.67
CAPRIN1-210ENST00000531668 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
CAPRIN1-210ENST00000531668 PLA2R1Q13018 1463 aa25.47■■□□□ 1.67
CAPRIN1-210ENST00000531668 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
CAPRIN1-210ENST00000531668 SYNMO15061 1565 aa25.46■■□□□ 1.67
CAPRIN1-210ENST00000531668 SETD5Q9C0A6 1442 aa25.45■■□□□ 1.66
CAPRIN1-210ENST00000531668 PIK3C2BO00750 1634 aa25.45■■□□□ 1.66
CAPRIN1-210ENST00000531668 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
CAPRIN1-210ENST00000531668 UBR1Q8IWV7 1749 aa25.42■■□□□ 1.66
CAPRIN1-210ENST00000531668 PTPRTO14522 1441 aa25.4■■□□□ 1.66
CAPRIN1-210ENST00000531668 TXNDC2Q86VQ3 553 aa25.38■■□□□ 1.65
CAPRIN1-210ENST00000531668 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
CAPRIN1-210ENST00000531668 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
CAPRIN1-210ENST00000531668 FOXD1Q16676 465 aa25.36■■□□□ 1.65
CAPRIN1-210ENST00000531668 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
CAPRIN1-210ENST00000531668 POLR1AO95602 1720 aaPredicted RBP25.36■■□□□ 1.65
CAPRIN1-210ENST00000531668 LTKP29376 864 aa25.34■■□□□ 1.65
CAPRIN1-210ENST00000531668 MPHOSPH9Q99550 1183 aa25.34■■□□□ 1.65
CAPRIN1-210ENST00000531668 ADGRB3O60242 1522 aa25.32■■□□□ 1.64
CAPRIN1-210ENST00000531668 TMEM2Q9UHN6 1383 aa25.32■■□□□ 1.64
CAPRIN1-210ENST00000531668 SPHKAPQ2M3C7 1700 aa25.32■■□□□ 1.64
CAPRIN1-210ENST00000531668 NPHP4O75161 1426 aaPredicted RBP25.32■■□□□ 1.64
CAPRIN1-210ENST00000531668 BCANQ96GW7 911 aa25.32■■□□□ 1.64
CAPRIN1-210ENST00000531668 NEURL4Q96JN8 1562 aa25.31■■□□□ 1.64
CAPRIN1-210ENST00000531668 SCAF11Q99590 1463 aaKnown RBP25.3■■□□□ 1.64
CAPRIN1-210ENST00000531668 MYO5BQ9ULV0 1848 aa25.29■■□□□ 1.64
CAPRIN1-210ENST00000531668 PPP1R15AO75807 674 aaPredicted RBP25.29■■□□□ 1.64
CAPRIN1-210ENST00000531668 NUTM2DQ5VT03 806 aaPredicted RBP25.29■■□□□ 1.64
CAPRIN1-210ENST00000531668 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
CAPRIN1-210ENST00000531668 ZNF326Q5BKZ1 582 aaKnown RBP25.28■■□□□ 1.64
CAPRIN1-210ENST00000531668 ARHGAP23Q9P227 1491 aa25.28■■□□□ 1.64
CAPRIN1-210ENST00000531668 SLIT1O75093 1534 aa25.27■■□□□ 1.64
CAPRIN1-210ENST00000531668 ACIN1Q9UKV3 1341 aaKnown RBP25.27■■□□□ 1.64
CAPRIN1-210ENST00000531668 KDM5AP29375 1690 aaKnown RBP25.26■■□□□ 1.63
CAPRIN1-210ENST00000531668 HDGFP51858 240 aaKnown RBP25.25■■□□□ 1.63
CAPRIN1-210ENST00000531668 CERKQ8TCT0 537 aa25.25■■□□□ 1.63
CAPRIN1-210ENST00000531668 TMEM131LA2VDJ0 1609 aa25.25■■□□□ 1.63
CAPRIN1-210ENST00000531668 IQGAP1P46940 1657 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms