RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
FOXR1-202ENST00000531539 C3P01024 1663 aa22.08■■□□□ 1.13
FOXR1-202ENST00000531539 CLTCQ00610 1675 aaKnown RBP22.08■■□□□ 1.13
FOXR1-202ENST00000531539 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
FOXR1-202ENST00000531539 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
FOXR1-202ENST00000531539 SETD1BQ9UPS6 1966 aaKnown RBP22.06■■□□□ 1.12
FOXR1-202ENST00000531539 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
FOXR1-202ENST00000531539 UHRF1BP1Q6BDS2 1440 aa22.04■■□□□ 1.12
FOXR1-202ENST00000531539 MROH2AA6NES4 1674 aa22.02■■□□□ 1.12
FOXR1-202ENST00000531539 ERBINQ96RT1 1412 aa22.02■■□□□ 1.12
FOXR1-202ENST00000531539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.01■■□□□ 1.11
FOXR1-202ENST00000531539 NPATQ14207 1427 aa22.01■■□□□ 1.11
FOXR1-202ENST00000531539 ADGRL2O95490 1459 aa22■■□□□ 1.11
FOXR1-202ENST00000531539 KDM5DQ9BY66 1539 aa21.99■■□□□ 1.11
FOXR1-202ENST00000531539 EIF2AK4Q9P2K8 1649 aaKnown RBP21.98■■□□□ 1.11
FOXR1-202ENST00000531539 KANK1Q14678 1352 aa21.98■■□□□ 1.11
FOXR1-202ENST00000531539 PREX1Q8TCU6 1659 aa21.98■■□□□ 1.11
FOXR1-202ENST00000531539 RNF17Q9BXT8 1623 aaKnown RBP21.96■■□□□ 1.11
FOXR1-202ENST00000531539 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
FOXR1-202ENST00000531539 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
FOXR1-202ENST00000531539 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
FOXR1-202ENST00000531539 TNRQ92752 1358 aa21.94■■□□□ 1.1
FOXR1-202ENST00000531539 FAM135AQ9P2D6 1515 aa21.94■■□□□ 1.1
FOXR1-202ENST00000531539 ABCC3O15438 1527 aa21.93■■□□□ 1.1
FOXR1-202ENST00000531539 PZPP20742 1482 aa21.92■■□□□ 1.1
FOXR1-202ENST00000531539 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
FOXR1-202ENST00000531539 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.09
FOXR1-202ENST00000531539 NCKAP5LQ9HCH0 1330 aa21.86■■□□□ 1.09
FOXR1-202ENST00000531539 CEP152O94986 1710 aa21.86■■□□□ 1.09
FOXR1-202ENST00000531539 PRDM15P57071 1507 aaPredicted RBP21.85■■□□□ 1.09
FOXR1-202ENST00000531539 CFAP65Q6ZU64 1925 aaKnown RBP21.85■■□□□ 1.09
FOXR1-202ENST00000531539 ZC3H13Q5T200 1668 aaKnown RBP21.84■■□□□ 1.09
FOXR1-202ENST00000531539 THEMISQ8N1K5 641 aaPredicted RBP21.83■■□□□ 1.09
FOXR1-202ENST00000531539 A2ML1A8K2U0 1454 aa21.83■■□□□ 1.08
FOXR1-202ENST00000531539 ARHGAP31Q2M1Z3 1444 aa21.82■■□□□ 1.08
FOXR1-202ENST00000531539 DEPDC5O75140 1603 aa21.82■■□□□ 1.08
FOXR1-202ENST00000531539 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
FOXR1-202ENST00000531539 MYO3AQ8NEV4 1616 aa21.81■■□□□ 1.08
FOXR1-202ENST00000531539 NUP155O75694 1391 aa21.81■■□□□ 1.08
FOXR1-202ENST00000531539 ERVK-7P63135 1459 aa21.81■■□□□ 1.08
FOXR1-202ENST00000531539 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
FOXR1-202ENST00000531539 PKD2Q13563 968 aa21.79■■□□□ 1.08
FOXR1-202ENST00000531539 VWDEQ8N2E2 1590 aa21.78■■□□□ 1.08
FOXR1-202ENST00000531539 LMTK2Q8IWU2 1503 aa21.78■■□□□ 1.08
FOXR1-202ENST00000531539 NLRP1Q9C000 1473 aa21.77■■□□□ 1.08
FOXR1-202ENST00000531539 STRCQ7RTU9 1775 aa21.77■■□□□ 1.08
FOXR1-202ENST00000531539 SPATA31D1Q6ZQQ2 1576 aa21.77■■□□□ 1.08
FOXR1-202ENST00000531539 ANKLE2Q86XL3 938 aa21.76■■□□□ 1.07
FOXR1-202ENST00000531539 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
FOXR1-202ENST00000531539 IDI1Q13907 227 aa21.75■■□□□ 1.07
FOXR1-202ENST00000531539 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
FOXR1-202ENST00000531539 NAIPQ13075 1403 aa21.74■■□□□ 1.07
FOXR1-202ENST00000531539 PTPRTO14522 1441 aa21.73■■□□□ 1.07
FOXR1-202ENST00000531539 ZNF142P52746 1687 aaPredicted RBP21.73■■□□□ 1.07
FOXR1-202ENST00000531539 UGGT1Q9NYU2 1555 aa21.73■■□□□ 1.07
FOXR1-202ENST00000531539 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
FOXR1-202ENST00000531539 SLC52A1Q9NWF4 448 aa21.7■■□□□ 1.06
FOXR1-202ENST00000531539 UNC13BO14795 1591 aa21.7■■□□□ 1.06
FOXR1-202ENST00000531539 EFCAB6Q5THR3 1501 aa21.69■■□□□ 1.06
FOXR1-202ENST00000531539 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
FOXR1-202ENST00000531539 NOS1P29475 1434 aa21.68■■□□□ 1.06
FOXR1-202ENST00000531539 CHGAP10645 457 aaKnown RBP21.66■■□□□ 1.06
FOXR1-202ENST00000531539 TXNDC2Q86VQ3 553 aa21.66■■□□□ 1.06
FOXR1-202ENST00000531539 CERKQ8TCT0 537 aa21.66■■□□□ 1.06
FOXR1-202ENST00000531539 RPRD2Q5VT52 1461 aaKnown RBP21.65■■□□□ 1.06
FOXR1-202ENST00000531539 TET3O43151 1660 aa21.65■■□□□ 1.06
FOXR1-202ENST00000531539 EID1Q9Y6B2 187 aa21.64■■□□□ 1.05
FOXR1-202ENST00000531539 LTKP29376 864 aa21.63■■□□□ 1.05
FOXR1-202ENST00000531539 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
FOXR1-202ENST00000531539 SYNMO15061 1565 aa21.61■■□□□ 1.05
FOXR1-202ENST00000531539 ILDR1Q86SU0 546 aaPredicted RBP21.61■■□□□ 1.05
FOXR1-202ENST00000531539 SLC4A1APQ9BWU0 796 aaKnown RBP21.61■■□□□ 1.05
FOXR1-202ENST00000531539 ZNF335Q9H4Z2 1342 aaPredicted RBP21.6■■□□□ 1.05
FOXR1-202ENST00000531539 GCC2Q8IWJ2 1684 aa21.6■■□□□ 1.05
FOXR1-202ENST00000531539 PIK3C2BO00750 1634 aa21.59■■□□□ 1.05
FOXR1-202ENST00000531539 UBR1Q8IWV7 1749 aa21.58■■□□□ 1.05
FOXR1-202ENST00000531539 NPHP4O75161 1426 aaPredicted RBP21.58■■□□□ 1.05
FOXR1-202ENST00000531539 E9PCH4 1651 aa21.58■■□□□ 1.05
FOXR1-202ENST00000531539 TMEM2Q9UHN6 1383 aa21.58■■□□□ 1.04
FOXR1-202ENST00000531539 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
FOXR1-202ENST00000531539 HDGFP51858 240 aaKnown RBP21.55■■□□□ 1.04
FOXR1-202ENST00000531539 FBXO41Q8TF61 875 aa21.55■■□□□ 1.04
FOXR1-202ENST00000531539 BCANQ96GW7 911 aa21.55■■□□□ 1.04
FOXR1-202ENST00000531539 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
FOXR1-202ENST00000531539 NEURL4Q96JN8 1562 aa21.53■■□□□ 1.04
FOXR1-202ENST00000531539 MED14O60244 1454 aa21.53■■□□□ 1.04
FOXR1-202ENST00000531539 ARHGAP23Q9P227 1491 aa21.53■■□□□ 1.04
FOXR1-202ENST00000531539 FOXD1Q16676 465 aa21.53■■□□□ 1.04
FOXR1-202ENST00000531539 SCAF11Q99590 1463 aaKnown RBP21.52■■□□□ 1.04
FOXR1-202ENST00000531539 SLIT1O75093 1534 aa21.52■■□□□ 1.04
FOXR1-202ENST00000531539 MPHOSPH9Q99550 1183 aa21.52■■□□□ 1.04
FOXR1-202ENST00000531539 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.03
FOXR1-202ENST00000531539 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
FOXR1-202ENST00000531539 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
FOXR1-202ENST00000531539 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
FOXR1-202ENST00000531539 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
FOXR1-202ENST00000531539 ADGRB3O60242 1522 aa21.49■■□□□ 1.03
FOXR1-202ENST00000531539 LTBP4Q8N2S1 1624 aa21.48■■□□□ 1.03
FOXR1-202ENST00000531539 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.48■■□□□ 1.03
FOXR1-202ENST00000531539 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms