RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TSPY4P0CV99 314 aa14.78□□□□□ -0.04
NEDD8-206ENST00000531430 TSPY10P0CW01 314 aa14.78□□□□□ -0.04
NEDD8-206ENST00000531430 A2ML1A8K2U0 1454 aa14.77□□□□□ -0.04
NEDD8-206ENST00000531430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
NEDD8-206ENST00000531430 INO80Q9ULG1 1556 aaPredicted RBP14.77□□□□□ -0.05
NEDD8-206ENST00000531430 PLXNC1O60486 1568 aa14.76□□□□□ -0.05
NEDD8-206ENST00000531430 ADGBQ8N7X0 1667 aa14.75□□□□□ -0.05
NEDD8-206ENST00000531430 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
NEDD8-206ENST00000531430 DNMT1P26358 1616 aaKnown RBP14.74□□□□□ -0.05
NEDD8-206ENST00000531430 RSPH4AQ5TD94 716 aa14.74□□□□□ -0.05
NEDD8-206ENST00000531430 RTEL1-TNFRSF6BF6WH68 1400 aa14.74□□□□□ -0.05
NEDD8-206ENST00000531430 MBD5Q9P267 1494 aa14.73□□□□□ -0.05
NEDD8-206ENST00000531430 SHANK2Q9UPX8 1470 aa14.73□□□□□ -0.05
NEDD8-206ENST00000531430 MIA2Q96PC5 1412 aa14.71□□□□□ -0.05
NEDD8-206ENST00000531430 TIAM1Q13009 1591 aa14.7□□□□□ -0.06
NEDD8-206ENST00000531430 CPS1P31327 1500 aa14.69□□□□□ -0.06
NEDD8-206ENST00000531430 NPHP4O75161 1426 aaPredicted RBP14.68□□□□□ -0.06
NEDD8-206ENST00000531430 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
NEDD8-206ENST00000531430 CCDC141Q6ZP82 1450 aa14.68□□□□□ -0.06
NEDD8-206ENST00000531430 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
NEDD8-206ENST00000531430 EHBP1L1Q8N3D4 1523 aa14.67□□□□□ -0.06
NEDD8-206ENST00000531430 PZPP20742 1482 aa14.67□□□□□ -0.06
NEDD8-206ENST00000531430 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
NEDD8-206ENST00000531430 KDM5DQ9BY66 1539 aa14.66□□□□□ -0.06
NEDD8-206ENST00000531430 MED1Q15648 1581 aaPredicted RBP14.65□□□□□ -0.06
NEDD8-206ENST00000531430 CAMSAP2Q08AD1 1489 aa14.65□□□□□ -0.06
NEDD8-206ENST00000531430 NCOA2Q15596 1464 aa14.65□□□□□ -0.06
NEDD8-206ENST00000531430 POLR1AO95602 1720 aaPredicted RBP14.65□□□□□ -0.06
NEDD8-206ENST00000531430 TXNDC2Q86VQ3 553 aa14.64□□□□□ -0.07
NEDD8-206ENST00000531430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.079e-8■■■□□ 14.9
NEDD8-206ENST00000531430 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
NEDD8-206ENST00000531430 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
NEDD8-206ENST00000531430 CFAP65Q6ZU64 1925 aaKnown RBP14.63□□□□□ -0.07
NEDD8-206ENST00000531430 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
NEDD8-206ENST00000531430 EID1Q9Y6B2 187 aa14.61□□□□□ -0.07
NEDD8-206ENST00000531430 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
NEDD8-206ENST00000531430 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
NEDD8-206ENST00000531430 LTKP29376 864 aa14.59□□□□□ -0.07
NEDD8-206ENST00000531430 MED14O60244 1454 aa14.58□□□□□ -0.08
NEDD8-206ENST00000531430 BCANQ96GW7 911 aa14.58□□□□□ -0.08
NEDD8-206ENST00000531430 RRP7BPQ9NSQ0 103 aa14.58□□□□□ -0.08
NEDD8-206ENST00000531430 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
NEDD8-206ENST00000531430 KANK4Q5T7N3 995 aaPredicted RBP14.57□□□□□ -0.08
NEDD8-206ENST00000531430 IQGAP1P46940 1657 aa14.56□□□□□ -0.08
NEDD8-206ENST00000531430 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
NEDD8-206ENST00000531430 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
NEDD8-206ENST00000531430 ABCC3O15438 1527 aa14.54□□□□□ -0.08
NEDD8-206ENST00000531430 ARHGEF5Q12774 1597 aa14.53□□□□□ -0.08
NEDD8-206ENST00000531430 ERVK-7P63135 1459 aa14.53□□□□□ -0.08
NEDD8-206ENST00000531430 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
NEDD8-206ENST00000531430 STRCP1A6NGW2 1772 aa14.52□□□□□ -0.08
NEDD8-206ENST00000531430 APLP2Q06481 763 aa14.52□□□□□ -0.09
NEDD8-206ENST00000531430 SLC26A8Q96RN1 970 aa14.52□□□□□ -0.09
NEDD8-206ENST00000531430 RGS17Q9UGC6 210 aaPredicted RBP14.52□□□□□ -0.09
NEDD8-206ENST00000531430 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.09
NEDD8-206ENST00000531430 ALKQ9UM73 1620 aa14.52□□□□□ -0.09
NEDD8-206ENST00000531430 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
NEDD8-206ENST00000531430 SCAF11Q99590 1463 aaKnown RBP14.5□□□□□ -0.09
NEDD8-206ENST00000531430 KANK1Q14678 1352 aa14.48□□□□□ -0.09
NEDD8-206ENST00000531430 IDI1Q13907 227 aa14.48□□□□□ -0.09
NEDD8-206ENST00000531430 CEP152O94986 1710 aa14.48□□□□□ -0.09
NEDD8-206ENST00000531430 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
NEDD8-206ENST00000531430 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
NEDD8-206ENST00000531430 KCNA6P17658 529 aa14.47□□□□□ -0.09
NEDD8-206ENST00000531430 POTEAQ6S8J7 498 aa14.47□□□□□ -0.09
NEDD8-206ENST00000531430 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
NEDD8-206ENST00000531430 UBR1Q8IWV7 1749 aa14.46□□□□□ -0.09
NEDD8-206ENST00000531430 VPS8Q8N3P4 1428 aa14.46□□□□□ -0.09
NEDD8-206ENST00000531430 TMEM94Q12767 1356 aa14.46□□□□□ -0.1
NEDD8-206ENST00000531430 DUOX2Q9NRD8 1548 aa14.46□□□□□ -0.1
NEDD8-206ENST00000531430 ZC3H13Q5T200 1668 aaKnown RBP14.46□□□□□ -0.1
NEDD8-206ENST00000531430 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
NEDD8-206ENST00000531430 TMEM2Q9UHN6 1383 aa14.45□□□□□ -0.1
NEDD8-206ENST00000531430 SYNMO15061 1565 aa14.43□□□□□ -0.1
NEDD8-206ENST00000531430 EIF2AK4Q9P2K8 1649 aaKnown RBP14.43□□□□□ -0.1
NEDD8-206ENST00000531430 FAM135BQ49AJ0 1406 aa14.42□□□□□ -0.1
NEDD8-206ENST00000531430 MROH1Q8NDA8 1641 aa14.42□□□□□ -0.1
NEDD8-206ENST00000531430 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
NEDD8-206ENST00000531430 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
NEDD8-206ENST00000531430 C14orf37Q86TY3 774 aa14.42□□□□□ -0.1
NEDD8-206ENST00000531430 ARHGAP23Q9P227 1491 aa14.42□□□□□ -0.1
NEDD8-206ENST00000531430 ABCC5O15440 1437 aa14.41□□□□□ -0.1
NEDD8-206ENST00000531430 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
NEDD8-206ENST00000531430 SLIT1O75093 1534 aa14.41□□□□□ -0.1
NEDD8-206ENST00000531430 ARHGAP31Q2M1Z3 1444 aa14.41□□□□□ -0.1
NEDD8-206ENST00000531430 PIK3C2BO00750 1634 aa14.4□□□□□ -0.1
NEDD8-206ENST00000531430 MSH6P52701 1360 aa14.38□□□□□ -0.11
NEDD8-206ENST00000531430 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
NEDD8-206ENST00000531430 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
NEDD8-206ENST00000531430 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
NEDD8-206ENST00000531430 MEX3CQ5U5Q3 659 aaKnown RBP14.38□□□□□ -0.11
NEDD8-206ENST00000531430 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
NEDD8-206ENST00000531430 ERBINQ96RT1 1412 aa14.38□□□□□ -0.11
NEDD8-206ENST00000531430 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
NEDD8-206ENST00000531430 SLC52A1Q9NWF4 448 aa14.37□□□□□ -0.11
NEDD8-206ENST00000531430 EFCAB6Q5THR3 1501 aa14.36□□□□□ -0.11
NEDD8-206ENST00000531430 DAPK1P53355 1430 aa14.36□□□□□ -0.11
NEDD8-206ENST00000531430 PTPN23Q9H3S7 1636 aa14.34□□□□□ -0.11
NEDD8-206ENST00000531430 TRIM52Q96A61 297 aa14.34□□□□□ -0.11
NEDD8-206ENST00000531430 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms