RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
TM9SF1-211ENST00000531406 WASHC2CQ9Y4E1 1318 aa20.27■□□□□ 0.84
TM9SF1-211ENST00000531406 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
TM9SF1-211ENST00000531406 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-211ENST00000531406 A2ML1A8K2U0 1454 aa20.25■□□□□ 0.83
TM9SF1-211ENST00000531406 TNRQ92752 1358 aa20.25■□□□□ 0.83
TM9SF1-211ENST00000531406 MAP3K1Q13233 1512 aa20.25■□□□□ 0.83
TM9SF1-211ENST00000531406 ZNF335Q9H4Z2 1342 aaPredicted RBP20.25■□□□□ 0.83
TM9SF1-211ENST00000531406 KDM5DQ9BY66 1539 aa20.24■□□□□ 0.83
TM9SF1-211ENST00000531406 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
TM9SF1-211ENST00000531406 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
TM9SF1-211ENST00000531406 PZPP20742 1482 aa20.23■□□□□ 0.83
TM9SF1-211ENST00000531406 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
TM9SF1-211ENST00000531406 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
TM9SF1-211ENST00000531406 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
TM9SF1-211ENST00000531406 MAST1Q9Y2H9 1570 aa20.17■□□□□ 0.82
TM9SF1-211ENST00000531406 THEMISQ8N1K5 641 aaPredicted RBP20.15■□□□□ 0.82
TM9SF1-211ENST00000531406 NLRP1Q9C000 1473 aa20.13■□□□□ 0.81
TM9SF1-211ENST00000531406 UBAP1LF5GYI3 381 aa20.13■□□□□ 0.81
TM9SF1-211ENST00000531406 APLP2Q06481 763 aa20.13■□□□□ 0.81
TM9SF1-211ENST00000531406 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
TM9SF1-211ENST00000531406 ABCC3O15438 1527 aa20.12■□□□□ 0.81
TM9SF1-211ENST00000531406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.12■□□□□ 0.81
TM9SF1-211ENST00000531406 RNF17Q9BXT8 1623 aaKnown RBP20.12■□□□□ 0.81
TM9SF1-211ENST00000531406 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
TM9SF1-211ENST00000531406 ABCC5O15440 1437 aa20.09■□□□□ 0.81
TM9SF1-211ENST00000531406 NEURL4Q96JN8 1562 aa20.08■□□□□ 0.81
TM9SF1-211ENST00000531406 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.81
TM9SF1-211ENST00000531406 EIF2AK4Q9P2K8 1649 aaKnown RBP20.08■□□□□ 0.8
TM9SF1-211ENST00000531406 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.8
TM9SF1-211ENST00000531406 KIF15Q9NS87 1388 aa20.08■□□□□ 0.8
TM9SF1-211ENST00000531406 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
TM9SF1-211ENST00000531406 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
TM9SF1-211ENST00000531406 ERVK-7P63135 1459 aa20.05■□□□□ 0.8
TM9SF1-211ENST00000531406 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
TM9SF1-211ENST00000531406 SPATA31D1Q6ZQQ2 1576 aa20.05■□□□□ 0.8
TM9SF1-211ENST00000531406 ZC3H13Q5T200 1668 aaKnown RBP20.04■□□□□ 0.8
TM9SF1-211ENST00000531406 NPHP4O75161 1426 aaPredicted RBP20.04■□□□□ 0.8
TM9SF1-211ENST00000531406 MED14O60244 1454 aa20.04■□□□□ 0.8
TM9SF1-211ENST00000531406 DAPK1P53355 1430 aa20.02■□□□□ 0.8
TM9SF1-211ENST00000531406 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.8
TM9SF1-211ENST00000531406 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.8
TM9SF1-211ENST00000531406 POLR1AO95602 1720 aaPredicted RBP20.02■□□□□ 0.8
TM9SF1-211ENST00000531406 ILDR2Q71H61 639 aa20.02■□□□□ 0.8
TM9SF1-211ENST00000531406 CPS1P31327 1500 aa20.02■□□□□ 0.79
TM9SF1-211ENST00000531406 ERBINQ96RT1 1412 aa20.02■□□□□ 0.79
TM9SF1-211ENST00000531406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.79
TM9SF1-211ENST00000531406 DEPDC5O75140 1603 aa20■□□□□ 0.79
TM9SF1-211ENST00000531406 ARHGAP31Q2M1Z3 1444 aa19.99■□□□□ 0.79
TM9SF1-211ENST00000531406 VWDEQ8N2E2 1590 aa19.99■□□□□ 0.79
TM9SF1-211ENST00000531406 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
TM9SF1-211ENST00000531406 PRDM15P57071 1507 aaPredicted RBP19.97■□□□□ 0.79
TM9SF1-211ENST00000531406 TOM1O60784 492 aa19.97■□□□□ 0.79
TM9SF1-211ENST00000531406 ANKRD30AQ9BXX3 1397 aa19.96■□□□□ 0.79
TM9SF1-211ENST00000531406 KANK1Q14678 1352 aa19.95■□□□□ 0.79
TM9SF1-211ENST00000531406 CROCC2H7BZ55 1655 aa19.95■□□□□ 0.78
TM9SF1-211ENST00000531406 PIP4K2BP78356 416 aa19.95■□□□□ 0.78
TM9SF1-211ENST00000531406 CEP152O94986 1710 aa19.95■□□□□ 0.78
TM9SF1-211ENST00000531406 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
TM9SF1-211ENST00000531406 LTKP29376 864 aa19.92■□□□□ 0.78
TM9SF1-211ENST00000531406 HSPA1LP34931 641 aa19.92■□□□□ 0.78
TM9SF1-211ENST00000531406 TXNDC2Q86VQ3 553 aa19.92■□□□□ 0.78
TM9SF1-211ENST00000531406 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
TM9SF1-211ENST00000531406 SCAF11Q99590 1463 aaKnown RBP19.91■□□□□ 0.78
TM9SF1-211ENST00000531406 SOCS7O14512 581 aa19.9■□□□□ 0.78
TM9SF1-211ENST00000531406 ARHGAP23Q9P227 1491 aa19.9■□□□□ 0.78
TM9SF1-211ENST00000531406 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
TM9SF1-211ENST00000531406 UBR1Q8IWV7 1749 aa19.89■□□□□ 0.77
TM9SF1-211ENST00000531406 SLIT1O75093 1534 aa19.88■□□□□ 0.77
TM9SF1-211ENST00000531406 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
TM9SF1-211ENST00000531406 EID1Q9Y6B2 187 aa19.88■□□□□ 0.77
TM9SF1-211ENST00000531406 LRRC7Q96NW7 1537 aa19.87■□□□□ 0.77
TM9SF1-211ENST00000531406 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
TM9SF1-211ENST00000531406 TMEM2Q9UHN6 1383 aa19.86■□□□□ 0.77
TM9SF1-211ENST00000531406 IDI1Q13907 227 aa19.86■□□□□ 0.77
TM9SF1-211ENST00000531406 STAG3Q9UJ98 1225 aa19.86■□□□□ 0.77
TM9SF1-211ENST00000531406 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
TM9SF1-211ENST00000531406 PIK3C2BO00750 1634 aa19.82■□□□□ 0.76
TM9SF1-211ENST00000531406 NOS1P29475 1434 aa19.82■□□□□ 0.76
TM9SF1-211ENST00000531406 CFAP65Q6ZU64 1925 aaKnown RBP19.82■□□□□ 0.76
TM9SF1-211ENST00000531406 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
TM9SF1-211ENST00000531406 STRCP1A6NGW2 1772 aa19.8■□□□□ 0.76
TM9SF1-211ENST00000531406 EFCAB6Q5THR3 1501 aa19.8■□□□□ 0.76
TM9SF1-211ENST00000531406 SLC52A1Q9NWF4 448 aa19.79■□□□□ 0.76
TM9SF1-211ENST00000531406 SYNMO15061 1565 aa19.78■□□□□ 0.76
TM9SF1-211ENST00000531406 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
TM9SF1-211ENST00000531406 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
TM9SF1-211ENST00000531406 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
TM9SF1-211ENST00000531406 KCNA6P17658 529 aa19.73■□□□□ 0.75
TM9SF1-211ENST00000531406 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
TM9SF1-211ENST00000531406 MED1Q15648 1581 aaPredicted RBP19.73■□□□□ 0.75
TM9SF1-211ENST00000531406 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
TM9SF1-211ENST00000531406 TET3O43151 1660 aa19.71■□□□□ 0.75
TM9SF1-211ENST00000531406 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
TM9SF1-211ENST00000531406 ROCK1Q13464 1354 aa19.7■□□□□ 0.74
TM9SF1-211ENST00000531406 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
TM9SF1-211ENST00000531406 BCANQ96GW7 911 aa19.69■□□□□ 0.74
TM9SF1-211ENST00000531406 HDGFP51858 240 aaKnown RBP19.66■□□□□ 0.74
TM9SF1-211ENST00000531406 ZFYVE9O95405 1425 aa19.66■□□□□ 0.74
TM9SF1-211ENST00000531406 RBM33Q96EV2 1170 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms