RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 FER1L4A9Z1Z3 1794 aa20.46■□□□□ 0.87
FDFT1-219ENST00000531249 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
FDFT1-219ENST00000531249 RNF17Q9BXT8 1623 aaKnown RBP20.45■□□□□ 0.86
FDFT1-219ENST00000531249 HFM1A2PYH4 1435 aa20.44■□□□□ 0.86
FDFT1-219ENST00000531249 WASHC2CQ9Y4E1 1318 aa20.44■□□□□ 0.86
FDFT1-219ENST00000531249 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
FDFT1-219ENST00000531249 MROH1Q8NDA8 1641 aa20.42■□□□□ 0.86
FDFT1-219ENST00000531249 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
FDFT1-219ENST00000531249 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
FDFT1-219ENST00000531249 PTPRMP28827 1452 aa20.42■□□□□ 0.86
FDFT1-219ENST00000531249 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
FDFT1-219ENST00000531249 CLTCQ00610 1675 aaKnown RBP20.41■□□□□ 0.86
FDFT1-219ENST00000531249 KANK1Q14678 1352 aa20.4■□□□□ 0.86
FDFT1-219ENST00000531249 CNTLNQ9NXG0 1405 aa20.4■□□□□ 0.86
FDFT1-219ENST00000531249 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
FDFT1-219ENST00000531249 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
FDFT1-219ENST00000531249 KDM5DQ9BY66 1539 aa20.38■□□□□ 0.85
FDFT1-219ENST00000531249 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
FDFT1-219ENST00000531249 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
FDFT1-219ENST00000531249 ABCC3O15438 1527 aa20.37■□□□□ 0.85
FDFT1-219ENST00000531249 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
FDFT1-219ENST00000531249 NUP155O75694 1391 aa20.35■□□□□ 0.85
FDFT1-219ENST00000531249 UNC13BO14795 1591 aa20.35■□□□□ 0.85
FDFT1-219ENST00000531249 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
FDFT1-219ENST00000531249 CEP152O94986 1710 aa20.34■□□□□ 0.85
FDFT1-219ENST00000531249 FAM135AQ9P2D6 1515 aa20.33■□□□□ 0.85
FDFT1-219ENST00000531249 C3P01024 1663 aa20.32■□□□□ 0.84
FDFT1-219ENST00000531249 RAB3GAP2Q9H2M9 1393 aa20.32■□□□□ 0.84
FDFT1-219ENST00000531249 MROH2AA6NES4 1674 aa20.32■□□□□ 0.84
FDFT1-219ENST00000531249 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
FDFT1-219ENST00000531249 VWDEQ8N2E2 1590 aa20.31■□□□□ 0.84
FDFT1-219ENST00000531249 FBXO31Q5XUX0 539 aaPredicted RBP20.29■□□□□ 0.84
FDFT1-219ENST00000531249 CAMSAP1Q5T5Y3 1602 aa20.28■□□□□ 0.84
FDFT1-219ENST00000531249 LMTK2Q8IWU2 1503 aa20.27■□□□□ 0.84
FDFT1-219ENST00000531249 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.83
FDFT1-219ENST00000531249 PZPP20742 1482 aa20.26■□□□□ 0.83
FDFT1-219ENST00000531249 NPATQ14207 1427 aa20.24■□□□□ 0.83
FDFT1-219ENST00000531249 EFCAB6Q5THR3 1501 aa20.23■□□□□ 0.83
FDFT1-219ENST00000531249 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
FDFT1-219ENST00000531249 TET3O43151 1660 aa20.22■□□□□ 0.83
FDFT1-219ENST00000531249 ARHGAP31Q2M1Z3 1444 aa20.22■□□□□ 0.83
FDFT1-219ENST00000531249 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
FDFT1-219ENST00000531249 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
FDFT1-219ENST00000531249 ERVK-7P63135 1459 aa20.2■□□□□ 0.82
FDFT1-219ENST00000531249 TNRQ92752 1358 aa20.2■□□□□ 0.82
FDFT1-219ENST00000531249 HRCP23327 699 aa20.18■□□□□ 0.82
FDFT1-219ENST00000531249 PKD2Q13563 968 aa20.18■□□□□ 0.82
FDFT1-219ENST00000531249 MPHOSPH9Q99550 1183 aa20.18■□□□□ 0.82
FDFT1-219ENST00000531249 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
FDFT1-219ENST00000531249 E9PCH4 1651 aa20.17■□□□□ 0.82
FDFT1-219ENST00000531249 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
FDFT1-219ENST00000531249 RPRD2Q5VT52 1461 aaKnown RBP20.16■□□□□ 0.82
FDFT1-219ENST00000531249 SPATA31D1Q6ZQQ2 1576 aa20.16■□□□□ 0.82
FDFT1-219ENST00000531249 FOXD1Q16676 465 aa20.15■□□□□ 0.82
FDFT1-219ENST00000531249 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
FDFT1-219ENST00000531249 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
FDFT1-219ENST00000531249 NOS1P29475 1434 aa20.13■□□□□ 0.81
FDFT1-219ENST00000531249 MYO3AQ8NEV4 1616 aa20.12■□□□□ 0.81
FDFT1-219ENST00000531249 SYNMO15061 1565 aa20.1■□□□□ 0.81
FDFT1-219ENST00000531249 HSPA2P54652 639 aa20.1■□□□□ 0.81
FDFT1-219ENST00000531249 LMTK3Q96Q04 1460 aa20.1■□□□□ 0.81
FDFT1-219ENST00000531249 NLRP1Q9C000 1473 aa20.08■□□□□ 0.81
FDFT1-219ENST00000531249 IDI1Q13907 227 aa20.08■□□□□ 0.81
FDFT1-219ENST00000531249 CEP170BQ9Y4F5 1589 aaPredicted RBP20.07■□□□□ 0.8
FDFT1-219ENST00000531249 A2ML1A8K2U0 1454 aa20.06■□□□□ 0.8
FDFT1-219ENST00000531249 SLC52A1Q9NWF4 448 aa20.06■□□□□ 0.8
FDFT1-219ENST00000531249 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
FDFT1-219ENST00000531249 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
FDFT1-219ENST00000531249 PTPRTO14522 1441 aa20.05■□□□□ 0.8
FDFT1-219ENST00000531249 STAG3Q9UJ98 1225 aa20.05■□□□□ 0.8
FDFT1-219ENST00000531249 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
FDFT1-219ENST00000531249 PLA2R1Q13018 1463 aa20.04■□□□□ 0.8
FDFT1-219ENST00000531249 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
FDFT1-219ENST00000531249 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
FDFT1-219ENST00000531249 TRPM2O94759 1503 aa20.01■□□□□ 0.79
FDFT1-219ENST00000531249 THEMISQ8N1K5 641 aaPredicted RBP20■□□□□ 0.79
FDFT1-219ENST00000531249 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
FDFT1-219ENST00000531249 UBR1Q8IWV7 1749 aa19.97■□□□□ 0.79
FDFT1-219ENST00000531249 ADGRB3O60242 1522 aa19.97■□□□□ 0.79
FDFT1-219ENST00000531249 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
FDFT1-219ENST00000531249 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
FDFT1-219ENST00000531249 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
FDFT1-219ENST00000531249 NCKAP5LQ9HCH0 1330 aa19.93■□□□□ 0.78
FDFT1-219ENST00000531249 TMEM131LA2VDJ0 1609 aa19.92■□□□□ 0.78
FDFT1-219ENST00000531249 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
FDFT1-219ENST00000531249 ANKLE2Q86XL3 938 aa19.91■□□□□ 0.78
FDFT1-219ENST00000531249 MYO5BQ9ULV0 1848 aa19.9■□□□□ 0.78
FDFT1-219ENST00000531249 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
FDFT1-219ENST00000531249 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
FDFT1-219ENST00000531249 RGL3Q3MIN7 710 aa19.89■□□□□ 0.77
FDFT1-219ENST00000531249 NUTM2DQ5VT03 806 aaPredicted RBP19.89■□□□□ 0.77
FDFT1-219ENST00000531249 TXNDC2Q86VQ3 553 aa19.89■□□□□ 0.77
FDFT1-219ENST00000531249 KIF1BO60333 1816 aa19.88■□□□□ 0.77
FDFT1-219ENST00000531249 LTKP29376 864 aa19.88■□□□□ 0.77
FDFT1-219ENST00000531249 EID1Q9Y6B2 187 aa19.88■□□□□ 0.77
FDFT1-219ENST00000531249 SLIT1O75093 1534 aa19.87■□□□□ 0.77
FDFT1-219ENST00000531249 ARHGAP23Q9P227 1491 aa19.87■□□□□ 0.77
FDFT1-219ENST00000531249 RIMS2Q9UQ26 1411 aa19.87■□□□□ 0.77
FDFT1-219ENST00000531249 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
FDFT1-219ENST00000531249 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms