RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GGT6Q6P531 493 aa14.98□□□□□ -0.01
CHMP4A-205ENST00000531158 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
CHMP4A-205ENST00000531158 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
CHMP4A-205ENST00000531158 CEP162Q5TB80 1403 aa14.97□□□□□ -0.01
CHMP4A-205ENST00000531158 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
CHMP4A-205ENST00000531158 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
CHMP4A-205ENST00000531158 NCOA2Q15596 1464 aa14.94□□□□□ -0.02
CHMP4A-205ENST00000531158 CCDC141Q6ZP82 1450 aa14.94□□□□□ -0.02
CHMP4A-205ENST00000531158 DHX29Q7Z478 1369 aaKnown RBP14.93□□□□□ -0.02
CHMP4A-205ENST00000531158 PZPP20742 1482 aa14.93□□□□□ -0.02
CHMP4A-205ENST00000531158 STRCP1A6NGW2 1772 aa14.93□□□□□ -0.02
CHMP4A-205ENST00000531158 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
CHMP4A-205ENST00000531158 ALKQ9UM73 1620 aa14.92□□□□□ -0.02
CHMP4A-205ENST00000531158 PKD2Q13563 968 aa14.92□□□□□ -0.02
CHMP4A-205ENST00000531158 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
CHMP4A-205ENST00000531158 RNF17Q9BXT8 1623 aaKnown RBP14.92□□□□□ -0.02
CHMP4A-205ENST00000531158 VWDEQ8N2E2 1590 aa14.91□□□□□ -0.02
CHMP4A-205ENST00000531158 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
CHMP4A-205ENST00000531158 FBXO31Q5XUX0 539 aaPredicted RBP14.9□□□□□ -0.02
CHMP4A-205ENST00000531158 PPP6R1Q9UPN7 881 aa14.9□□□□□ -0.02
CHMP4A-205ENST00000531158 MROH1Q8NDA8 1641 aa14.89□□□□□ -0.03
CHMP4A-205ENST00000531158 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
CHMP4A-205ENST00000531158 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
CHMP4A-205ENST00000531158 TNRQ92752 1358 aa14.88□□□□□ -0.03
CHMP4A-205ENST00000531158 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
CHMP4A-205ENST00000531158 CEP152O94986 1710 aa14.88□□□□□ -0.03
CHMP4A-205ENST00000531158 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
CHMP4A-205ENST00000531158 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
CHMP4A-205ENST00000531158 RGS17Q9UGC6 210 aaPredicted RBP14.87□□□□□ -0.03
CHMP4A-205ENST00000531158 CPS1P31327 1500 aa14.87□□□□□ -0.03
CHMP4A-205ENST00000531158 KIF3BO15066 747 aa14.86□□□□□ -0.03
CHMP4A-205ENST00000531158 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
CHMP4A-205ENST00000531158 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
CHMP4A-205ENST00000531158 ABCC3O15438 1527 aa14.85□□□□□ -0.03
CHMP4A-205ENST00000531158 UGGT1Q9NYU2 1555 aa14.85□□□□□ -0.03
CHMP4A-205ENST00000531158 MED14O60244 1454 aa14.84□□□□□ -0.03
CHMP4A-205ENST00000531158 UBR1Q8IWV7 1749 aa14.84□□□□□ -0.03
CHMP4A-205ENST00000531158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHMP4A-205ENST00000531158 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
CHMP4A-205ENST00000531158 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
CHMP4A-205ENST00000531158 XIRP1Q702N8 1843 aaKnown RBP14.82□□□□□ -0.04
CHMP4A-205ENST00000531158 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
CHMP4A-205ENST00000531158 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
CHMP4A-205ENST00000531158 WASHC2CQ9Y4E1 1318 aa14.8□□□□□ -0.04
CHMP4A-205ENST00000531158 SYNMO15061 1565 aa14.79□□□□□ -0.04
CHMP4A-205ENST00000531158 NPHP4O75161 1426 aaPredicted RBP14.79□□□□□ -0.04
CHMP4A-205ENST00000531158 ERVK-7P63135 1459 aa14.79□□□□□ -0.04
CHMP4A-205ENST00000531158 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
CHMP4A-205ENST00000531158 RSPH4AQ5TD94 716 aa14.77□□□□□ -0.05
CHMP4A-205ENST00000531158 POTEAQ6S8J7 498 aa14.77□□□□□ -0.05
CHMP4A-205ENST00000531158 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
CHMP4A-205ENST00000531158 LRRC7Q96NW7 1537 aa14.76□□□□□ -0.05
CHMP4A-205ENST00000531158 ANKLE2Q86XL3 938 aa14.75□□□□□ -0.05
CHMP4A-205ENST00000531158 MAP3K1Q13233 1512 aa14.73□□□□□ -0.05
CHMP4A-205ENST00000531158 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
CHMP4A-205ENST00000531158 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
CHMP4A-205ENST00000531158 MYOM3Q5VTT5 1437 aa14.73□□□□□ -0.05
CHMP4A-205ENST00000531158 PIK3C2BO00750 1634 aa14.73□□□□□ -0.05
CHMP4A-205ENST00000531158 DUOX2Q9NRD8 1548 aa14.72□□□□□ -0.05
CHMP4A-205ENST00000531158 ARHGAP23Q9P227 1491 aa14.71□□□□□ -0.05
CHMP4A-205ENST00000531158 TSPY4P0CV99 314 aa14.71□□□□□ -0.05
CHMP4A-205ENST00000531158 TSPY10P0CW01 314 aa14.71□□□□□ -0.05
CHMP4A-205ENST00000531158 SLIT1O75093 1534 aa14.71□□□□□ -0.06
CHMP4A-205ENST00000531158 PTPN23Q9H3S7 1636 aa14.7□□□□□ -0.06
CHMP4A-205ENST00000531158 SCAF11Q99590 1463 aaKnown RBP14.69□□□□□ -0.06
CHMP4A-205ENST00000531158 KDM5AP29375 1690 aaKnown RBP14.68□□□□□ -0.06
CHMP4A-205ENST00000531158 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
CHMP4A-205ENST00000531158 ABCC5O15440 1437 aa14.66□□□□□ -0.06
CHMP4A-205ENST00000531158 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
CHMP4A-205ENST00000531158 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
CHMP4A-205ENST00000531158 MYO5BQ9ULV0 1848 aa14.65□□□□□ -0.06
CHMP4A-205ENST00000531158 LTKP29376 864 aa14.65□□□□□ -0.06
CHMP4A-205ENST00000531158 SETD1AO15047 1707 aaKnown RBP14.65□□□□□ -0.06
CHMP4A-205ENST00000531158 KIF15Q9NS87 1388 aa14.64□□□□□ -0.07
CHMP4A-205ENST00000531158 TET3O43151 1660 aa14.62□□□□□ -0.07
CHMP4A-205ENST00000531158 DAPK1P53355 1430 aa14.62□□□□□ -0.07
CHMP4A-205ENST00000531158 UPF1Q92900 1129 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHMP4A-205ENST00000531158 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
CHMP4A-205ENST00000531158 EFCAB6Q5THR3 1501 aa14.61□□□□□ -0.07
CHMP4A-205ENST00000531158 ROBO1Q9Y6N7 1651 aa14.59□□□□□ -0.07
CHMP4A-205ENST00000531158 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
CHMP4A-205ENST00000531158 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.07
CHMP4A-205ENST00000531158 RRP7BPQ9NSQ0 103 aa14.58□□□□□ -0.08
CHMP4A-205ENST00000531158 NWD1Q149M9 1564 aa14.58□□□□□ -0.08
CHMP4A-205ENST00000531158 ADGRB3O60242 1522 aa14.57□□□□□ -0.08
CHMP4A-205ENST00000531158 TXNDC2Q86VQ3 553 aa14.57□□□□□ -0.08
CHMP4A-205ENST00000531158 GCC2Q8IWJ2 1684 aa14.57□□□□□ -0.08
CHMP4A-205ENST00000531158 CHD2O14647 1828 aaKnown RBP14.56□□□□□ -0.08
CHMP4A-205ENST00000531158 NOS1P29475 1434 aa14.56□□□□□ -0.08
CHMP4A-205ENST00000531158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.087e-9■■■■□ 21.4
CHMP4A-205ENST00000531158 TMEM94Q12767 1356 aa14.53□□□□□ -0.08
CHMP4A-205ENST00000531158 ADGRL2O95490 1459 aa14.52□□□□□ -0.08
CHMP4A-205ENST00000531158 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
CHMP4A-205ENST00000531158 SRCAPQ6ZRS2 3230 aa14.52□□□□□ -0.08
CHMP4A-205ENST00000531158 IDI1Q13907 227 aa14.52□□□□□ -0.09
CHMP4A-205ENST00000531158 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
CHMP4A-205ENST00000531158 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.09
CHMP4A-205ENST00000531158 NKTRP30414 1462 aaKnown RBP14.5□□□□□ -0.09
CHMP4A-205ENST00000531158 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
CHMP4A-205ENST00000531158 CHIC2Q9UKJ5 165 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms