RNA–Protein interactions for RNA: ENST00000531138.1

RAB38-203, Transcript of RAB38, member RAS oncogene family, humanhuman

TSL 2

Gene RAB38, Length 928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-203ENST00000531138 PTPRKQ15262 1439 aa24.48■■□□□ 1.51
RAB38-203ENST00000531138 NCOA1Q15788 1441 aa24.46■■□□□ 1.51
RAB38-203ENST00000531138 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
RAB38-203ENST00000531138 RNF17Q9BXT8 1623 aaKnown RBP24.46■■□□□ 1.51
RAB38-203ENST00000531138 ANKRD30AQ9BXX3 1397 aa24.45■■□□□ 1.5
RAB38-203ENST00000531138 EIF2AK4Q9P2K8 1649 aaKnown RBP24.45■■□□□ 1.5
RAB38-203ENST00000531138 KDM5DQ9BY66 1539 aa24.45■■□□□ 1.5
RAB38-203ENST00000531138 ADGRL2O95490 1459 aa24.45■■□□□ 1.5
RAB38-203ENST00000531138 MROH1Q8NDA8 1641 aa24.44■■□□□ 1.5
RAB38-203ENST00000531138 NPATQ14207 1427 aa24.44■■□□□ 1.5
RAB38-203ENST00000531138 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
RAB38-203ENST00000531138 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
RAB38-203ENST00000531138 ERBINQ96RT1 1412 aa24.43■■□□□ 1.5
RAB38-203ENST00000531138 SETD1BQ9UPS6 1966 aaKnown RBP24.42■■□□□ 1.5
RAB38-203ENST00000531138 FAM135AQ9P2D6 1515 aa24.41■■□□□ 1.5
RAB38-203ENST00000531138 FBXO31Q5XUX0 539 aaPredicted RBP24.39■■□□□ 1.49
RAB38-203ENST00000531138 ABCC3O15438 1527 aa24.39■■□□□ 1.49
RAB38-203ENST00000531138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.38■■□□□ 1.49
RAB38-203ENST00000531138 PZPP20742 1482 aa24.36■■□□□ 1.49
RAB38-203ENST00000531138 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
RAB38-203ENST00000531138 PRDM15P57071 1507 aaPredicted RBP24.34■■□□□ 1.49
RAB38-203ENST00000531138 ITGAEP38570 1179 aa24.33■■□□□ 1.49
RAB38-203ENST00000531138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.32■■□□□ 1.48
RAB38-203ENST00000531138 DEPDC5O75140 1603 aa24.32■■□□□ 1.48
RAB38-203ENST00000531138 ROCK1Q13464 1354 aa24.3■■□□□ 1.48
RAB38-203ENST00000531138 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
RAB38-203ENST00000531138 ZC3H13Q5T200 1668 aaKnown RBP24.3■■□□□ 1.48
RAB38-203ENST00000531138 CEP152O94986 1710 aa24.3■■□□□ 1.48
RAB38-203ENST00000531138 ANKRD50Q9ULJ7 1429 aa24.29■■□□□ 1.48
RAB38-203ENST00000531138 TNRQ92752 1358 aa24.29■■□□□ 1.48
RAB38-203ENST00000531138 VWDEQ8N2E2 1590 aa24.27■■□□□ 1.48
RAB38-203ENST00000531138 STRCQ7RTU9 1775 aa24.26■■□□□ 1.47
RAB38-203ENST00000531138 CAMSAP1Q5T5Y3 1602 aa24.25■■□□□ 1.47
RAB38-203ENST00000531138 CEP170BQ9Y4F5 1589 aaPredicted RBP24.25■■□□□ 1.47
RAB38-203ENST00000531138 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
RAB38-203ENST00000531138 A2ML1A8K2U0 1454 aa24.23■■□□□ 1.47
RAB38-203ENST00000531138 ERVK-7P63135 1459 aa24.23■■□□□ 1.47
RAB38-203ENST00000531138 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
RAB38-203ENST00000531138 LMTK2Q8IWU2 1503 aa24.22■■□□□ 1.47
RAB38-203ENST00000531138 ARHGAP31Q2M1Z3 1444 aa24.22■■□□□ 1.47
RAB38-203ENST00000531138 KANK1Q14678 1352 aa24.22■■□□□ 1.47
RAB38-203ENST00000531138 NCKAP5LQ9HCH0 1330 aa24.16■■□□□ 1.46
RAB38-203ENST00000531138 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
RAB38-203ENST00000531138 UNC13BO14795 1591 aa24.15■■□□□ 1.46
RAB38-203ENST00000531138 CFAP65Q6ZU64 1925 aaKnown RBP24.14■■□□□ 1.45
RAB38-203ENST00000531138 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
RAB38-203ENST00000531138 PTPRTO14522 1441 aa24.12■■□□□ 1.45
RAB38-203ENST00000531138 EFCAB6Q5THR3 1501 aa24.12■■□□□ 1.45
RAB38-203ENST00000531138 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
RAB38-203ENST00000531138 NAIPQ13075 1403 aa24.1■■□□□ 1.45
RAB38-203ENST00000531138 UGGT1Q9NYU2 1555 aa24.09■■□□□ 1.45
RAB38-203ENST00000531138 PKD2Q13563 968 aa24.08■■□□□ 1.45
RAB38-203ENST00000531138 NOS1P29475 1434 aa24.08■■□□□ 1.44
RAB38-203ENST00000531138 THEMISQ8N1K5 641 aaPredicted RBP24.06■■□□□ 1.44
RAB38-203ENST00000531138 SYNMO15061 1565 aa24.06■■□□□ 1.44
RAB38-203ENST00000531138 TET3O43151 1660 aa24.05■■□□□ 1.44
RAB38-203ENST00000531138 NUP155O75694 1391 aa24.05■■□□□ 1.44
RAB38-203ENST00000531138 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
RAB38-203ENST00000531138 HFM1A2PYH4 1435 aa24.03■■□□□ 1.44
RAB38-203ENST00000531138 RPRD2Q5VT52 1461 aaKnown RBP24.02■■□□□ 1.44
RAB38-203ENST00000531138 IDI1Q13907 227 aa24.02■■□□□ 1.44
RAB38-203ENST00000531138 NEURL4Q96JN8 1562 aa24.01■■□□□ 1.43
RAB38-203ENST00000531138 GCC2Q8IWJ2 1684 aa24.01■■□□□ 1.43
RAB38-203ENST00000531138 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
RAB38-203ENST00000531138 PIK3C2BO00750 1634 aa23.99■■□□□ 1.43
RAB38-203ENST00000531138 ANKLE2Q86XL3 938 aa23.99■■□□□ 1.43
RAB38-203ENST00000531138 E9PCH4 1651 aa23.98■■□□□ 1.43
RAB38-203ENST00000531138 ILDR1Q86SU0 546 aaPredicted RBP23.96■■□□□ 1.43
RAB38-203ENST00000531138 CERKQ8TCT0 537 aa23.95■■□□□ 1.42
RAB38-203ENST00000531138 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
RAB38-203ENST00000531138 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
RAB38-203ENST00000531138 LTBP4Q8N2S1 1624 aa23.94■■□□□ 1.42
RAB38-203ENST00000531138 MED14O60244 1454 aa23.94■■□□□ 1.42
RAB38-203ENST00000531138 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
RAB38-203ENST00000531138 LTKP29376 864 aa23.93■■□□□ 1.42
RAB38-203ENST00000531138 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
RAB38-203ENST00000531138 SLIT1O75093 1534 aa23.93■■□□□ 1.42
RAB38-203ENST00000531138 NPHP4O75161 1426 aaPredicted RBP23.92■■□□□ 1.42
RAB38-203ENST00000531138 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
RAB38-203ENST00000531138 STAG3Q9UJ98 1225 aa23.9■■□□□ 1.42
RAB38-203ENST00000531138 ADGRB3O60242 1522 aa23.89■■□□□ 1.42
RAB38-203ENST00000531138 TXNDC2Q86VQ3 553 aa23.88■■□□□ 1.41
RAB38-203ENST00000531138 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
RAB38-203ENST00000531138 KDM5AP29375 1690 aaKnown RBP23.87■■□□□ 1.41
RAB38-203ENST00000531138 FBXO41Q8TF61 875 aa23.87■■□□□ 1.41
RAB38-203ENST00000531138 TRIM52Q96A61 297 aa23.87■■□□□ 1.41
RAB38-203ENST00000531138 IQGAP1P46940 1657 aa23.84■■□□□ 1.41
RAB38-203ENST00000531138 TMEM131LA2VDJ0 1609 aa23.83■■□□□ 1.41
RAB38-203ENST00000531138 EID1Q9Y6B2 187 aa23.82■■□□□ 1.4
RAB38-203ENST00000531138 ZFYVE9O95405 1425 aa23.79■■□□□ 1.4
RAB38-203ENST00000531138 CHGAP10645 457 aaKnown RBP23.79■■□□□ 1.4
RAB38-203ENST00000531138 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
RAB38-203ENST00000531138 MYO5BQ9ULV0 1848 aa23.79■■□□□ 1.4
RAB38-203ENST00000531138 SETD5Q9C0A6 1442 aa23.78■■□□□ 1.4
RAB38-203ENST00000531138 SPHKAPQ2M3C7 1700 aa23.78■■□□□ 1.4
RAB38-203ENST00000531138 RIMS2Q9UQ26 1411 aa23.76■■□□□ 1.39
RAB38-203ENST00000531138 TRPM2O94759 1503 aa23.74■■□□□ 1.39
RAB38-203ENST00000531138 FOXD1Q16676 465 aa23.74■■□□□ 1.39
RAB38-203ENST00000531138 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
RAB38-203ENST00000531138 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms