RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 EIF2AK4Q9P2K8 1649 aaKnown RBP20.51■□□□□ 0.87
NXF1-207ENST00000530875 ATP10AO60312 1499 aa20.5■□□□□ 0.87
NXF1-207ENST00000530875 PZPP20742 1482 aa20.5■□□□□ 0.87
NXF1-207ENST00000530875 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
NXF1-207ENST00000530875 KDM5DQ9BY66 1539 aa20.49■□□□□ 0.87
NXF1-207ENST00000530875 ARHGEF40Q8TER5 1519 aa20.48■□□□□ 0.87
NXF1-207ENST00000530875 DEPDC5O75140 1603 aa20.46■□□□□ 0.87
NXF1-207ENST00000530875 FAM135AQ9P2D6 1515 aa20.45■□□□□ 0.86
NXF1-207ENST00000530875 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
NXF1-207ENST00000530875 REREQ9P2R6 1566 aa20.43■□□□□ 0.86
NXF1-207ENST00000530875 FOXD1Q16676 465 aa20.43■□□□□ 0.86
NXF1-207ENST00000530875 MROH1Q8NDA8 1641 aa20.43■□□□□ 0.86
NXF1-207ENST00000530875 BCORL1Q5H9F3 1711 aa20.42■□□□□ 0.86
NXF1-207ENST00000530875 IQGAP3Q86VI3 1631 aa20.42■□□□□ 0.86
NXF1-207ENST00000530875 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
NXF1-207ENST00000530875 GGT6Q6P531 493 aa20.42■□□□□ 0.86
NXF1-207ENST00000530875 PRDM15P57071 1507 aaPredicted RBP20.42■□□□□ 0.86
NXF1-207ENST00000530875 PKD2Q13563 968 aa20.41■□□□□ 0.86
NXF1-207ENST00000530875 KANK1Q14678 1352 aa20.41■□□□□ 0.86
NXF1-207ENST00000530875 SIGLEC1Q9BZZ2 1709 aa20.39■□□□□ 0.85
NXF1-207ENST00000530875 VWDEQ8N2E2 1590 aa20.39■□□□□ 0.85
NXF1-207ENST00000530875 AGLP35573 1532 aa20.38■□□□□ 0.85
NXF1-207ENST00000530875 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
NXF1-207ENST00000530875 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
NXF1-207ENST00000530875 ARID4BQ4LE39 1312 aaPredicted RBP20.32■□□□□ 0.84
NXF1-207ENST00000530875 WASHC2CQ9Y4E1 1318 aa20.32■□□□□ 0.84
NXF1-207ENST00000530875 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
NXF1-207ENST00000530875 MLECQ14165 292 aa20.31■□□□□ 0.84
NXF1-207ENST00000530875 TET3O43151 1660 aa20.31■□□□□ 0.84
NXF1-207ENST00000530875 ABCC3O15438 1527 aa20.31■□□□□ 0.84
NXF1-207ENST00000530875 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
NXF1-207ENST00000530875 CEP152O94986 1710 aa20.3■□□□□ 0.84
NXF1-207ENST00000530875 E9PCH4 1651 aa20.28■□□□□ 0.84
NXF1-207ENST00000530875 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
NXF1-207ENST00000530875 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
NXF1-207ENST00000530875 ZC3H13Q5T200 1668 aaKnown RBP20.25■□□□□ 0.83
NXF1-207ENST00000530875 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
NXF1-207ENST00000530875 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
NXF1-207ENST00000530875 NPATQ14207 1427 aa20.22■□□□□ 0.83
NXF1-207ENST00000530875 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
NXF1-207ENST00000530875 PTPRTO14522 1441 aa20.2■□□□□ 0.82
NXF1-207ENST00000530875 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
NXF1-207ENST00000530875 CCDC144AA2RUR9 1427 aa20.18■□□□□ 0.82
NXF1-207ENST00000530875 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
NXF1-207ENST00000530875 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
NXF1-207ENST00000530875 TONSLQ96HA7 1378 aa20.18■□□□□ 0.82
NXF1-207ENST00000530875 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
NXF1-207ENST00000530875 TRPM2O94759 1503 aa20.17■□□□□ 0.82
NXF1-207ENST00000530875 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
NXF1-207ENST00000530875 ZMYM3Q14202 1370 aa20.11■□□□□ 0.81
NXF1-207ENST00000530875 NOS1P29475 1434 aa20.11■□□□□ 0.81
NXF1-207ENST00000530875 CNTLNQ9NXG0 1405 aa20.11■□□□□ 0.81
NXF1-207ENST00000530875 UGGT1Q9NYU2 1555 aa20.11■□□□□ 0.81
NXF1-207ENST00000530875 FBXO31Q5XUX0 539 aaPredicted RBP20.11■□□□□ 0.81
NXF1-207ENST00000530875 CLTCL1P53675 1640 aa20.11■□□□□ 0.81
NXF1-207ENST00000530875 L3MBTL2Q969R5 705 aa20.1■□□□□ 0.81
NXF1-207ENST00000530875 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
NXF1-207ENST00000530875 PREX1Q8TCU6 1659 aa20.09■□□□□ 0.81
NXF1-207ENST00000530875 SYNMO15061 1565 aa20.08■□□□□ 0.81
NXF1-207ENST00000530875 ERVK-7P63135 1459 aa20.08■□□□□ 0.8
NXF1-207ENST00000530875 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.8
NXF1-207ENST00000530875 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
NXF1-207ENST00000530875 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
NXF1-207ENST00000530875 RGL3Q3MIN7 710 aa20.05■□□□□ 0.8
NXF1-207ENST00000530875 MADDQ8WXG6 1647 aa20.04■□□□□ 0.8
NXF1-207ENST00000530875 SPATA31E1Q6ZUB1 1445 aa20.04■□□□□ 0.8
NXF1-207ENST00000530875 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
NXF1-207ENST00000530875 CEBPAP49715 358 aaPredicted RBP20.03■□□□□ 0.8
NXF1-207ENST00000530875 ADAMTSL3P82987 1691 aa20.02■□□□□ 0.8
NXF1-207ENST00000530875 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
NXF1-207ENST00000530875 IDI1Q13907 227 aa20.01■□□□□ 0.79
NXF1-207ENST00000530875 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
NXF1-207ENST00000530875 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
NXF1-207ENST00000530875 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
NXF1-207ENST00000530875 DCAF11Q8TEB1 546 aa20■□□□□ 0.79
NXF1-207ENST00000530875 C3P01024 1663 aa20■□□□□ 0.79
NXF1-207ENST00000530875 RIMS1Q86UR5 1692 aaKnown RBP19.99■□□□□ 0.79
NXF1-207ENST00000530875 KIF1BO60333 1816 aa19.98■□□□□ 0.79
NXF1-207ENST00000530875 KDM2AQ9Y2K7 1162 aa19.98■□□□□ 0.79
NXF1-207ENST00000530875 ADGRB3O60242 1522 aa19.97■□□□□ 0.79
NXF1-207ENST00000530875 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
NXF1-207ENST00000530875 TNRQ92752 1358 aa19.97■□□□□ 0.79
NXF1-207ENST00000530875 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
NXF1-207ENST00000530875 NBPF8Q3BBV2 869 aa19.94■□□□□ 0.78
NXF1-207ENST00000530875 TMEM131LA2VDJ0 1609 aa19.91■□□□□ 0.78
NXF1-207ENST00000530875 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
NXF1-207ENST00000530875 UHRF1BP1Q6BDS2 1440 aa19.9■□□□□ 0.78
NXF1-207ENST00000530875 PRAG1Q86YV5 1406 aa19.88■□□□□ 0.77
NXF1-207ENST00000530875 PTPRMP28827 1452 aa19.87■□□□□ 0.77
NXF1-207ENST00000530875 NLRP1Q9C000 1473 aa19.87■□□□□ 0.77
NXF1-207ENST00000530875 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
NXF1-207ENST00000530875 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
NXF1-207ENST00000530875 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
NXF1-207ENST00000530875 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
NXF1-207ENST00000530875 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
NXF1-207ENST00000530875 MYOM2P54296 1465 aa19.84■□□□□ 0.77
NXF1-207ENST00000530875 NEXMIFQ5QGS0 1516 aa19.84■□□□□ 0.77
NXF1-207ENST00000530875 NUTM2DQ5VT03 806 aaPredicted RBP19.83■□□□□ 0.77
NXF1-207ENST00000530875 PPLO60437 1756 aa19.83■□□□□ 0.76
NXF1-207ENST00000530875 ADGRF5Q8IZF2 1346 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms