RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
PPFIA1-216ENST00000530746 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
PPFIA1-216ENST00000530746 RRP7BPQ9NSQ0 103 aa23■■□□□ 1.27
PPFIA1-216ENST00000530746 KDM5DQ9BY66 1539 aa22.99■■□□□ 1.27
PPFIA1-216ENST00000530746 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
PPFIA1-216ENST00000530746 ANKRD30AQ9BXX3 1397 aa22.99■■□□□ 1.27
PPFIA1-216ENST00000530746 NPATQ14207 1427 aa22.98■■□□□ 1.27
PPFIA1-216ENST00000530746 ERBINQ96RT1 1412 aa22.98■■□□□ 1.27
PPFIA1-216ENST00000530746 NCOA1Q15788 1441 aa22.97■■□□□ 1.27
PPFIA1-216ENST00000530746 UHRF1BP1Q6BDS2 1440 aa22.97■■□□□ 1.27
PPFIA1-216ENST00000530746 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
PPFIA1-216ENST00000530746 WASHC2CQ9Y4E1 1318 aa22.96■■□□□ 1.27
PPFIA1-216ENST00000530746 HSPA2P54652 639 aa22.95■■□□□ 1.26
PPFIA1-216ENST00000530746 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
PPFIA1-216ENST00000530746 MROH1Q8NDA8 1641 aa22.95■■□□□ 1.26
PPFIA1-216ENST00000530746 PTPRKQ15262 1439 aa22.94■■□□□ 1.26
PPFIA1-216ENST00000530746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.269e-7■■■□□ 16.5
PPFIA1-216ENST00000530746 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
PPFIA1-216ENST00000530746 ABCC3O15438 1527 aa22.9■■□□□ 1.26
PPFIA1-216ENST00000530746 CEP152O94986 1710 aa22.9■■□□□ 1.26
PPFIA1-216ENST00000530746 PRDM15P57071 1507 aaPredicted RBP22.89■■□□□ 1.26
PPFIA1-216ENST00000530746 PZPP20742 1482 aa22.89■■□□□ 1.25
PPFIA1-216ENST00000530746 MYO3AQ8NEV4 1616 aa22.88■■□□□ 1.25
PPFIA1-216ENST00000530746 RRBP1Q9P2E9 1410 aaKnown RBP22.87■■□□□ 1.25
PPFIA1-216ENST00000530746 ZNF142P52746 1687 aaPredicted RBP22.85■■□□□ 1.25
PPFIA1-216ENST00000530746 CAMSAP1Q5T5Y3 1602 aa22.85■■□□□ 1.25
PPFIA1-216ENST00000530746 ROCK1Q13464 1354 aa22.84■■□□□ 1.25
PPFIA1-216ENST00000530746 ANKRD50Q9ULJ7 1429 aa22.83■■□□□ 1.25
PPFIA1-216ENST00000530746 FBXO31Q5XUX0 539 aaPredicted RBP22.83■■□□□ 1.25
PPFIA1-216ENST00000530746 STRCQ7RTU9 1775 aa22.83■■□□□ 1.24
PPFIA1-216ENST00000530746 CEP170BQ9Y4F5 1589 aaPredicted RBP22.82■■□□□ 1.24
PPFIA1-216ENST00000530746 ITGAEP38570 1179 aa22.82■■□□□ 1.24
PPFIA1-216ENST00000530746 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
PPFIA1-216ENST00000530746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.242e-6■□□□□ 10.7
PPFIA1-216ENST00000530746 KANK1Q14678 1352 aa22.8■■□□□ 1.24
PPFIA1-216ENST00000530746 TNRQ92752 1358 aa22.8■■□□□ 1.24
PPFIA1-216ENST00000530746 VWDEQ8N2E2 1590 aa22.79■■□□□ 1.24
PPFIA1-216ENST00000530746 SPATA31D1Q6ZQQ2 1576 aa22.77■■□□□ 1.24
PPFIA1-216ENST00000530746 A2ML1A8K2U0 1454 aa22.77■■□□□ 1.24
PPFIA1-216ENST00000530746 ARHGAP31Q2M1Z3 1444 aa22.76■■□□□ 1.23
PPFIA1-216ENST00000530746 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
PPFIA1-216ENST00000530746 ERVK-7P63135 1459 aa22.74■■□□□ 1.23
PPFIA1-216ENST00000530746 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
PPFIA1-216ENST00000530746 UNC13BO14795 1591 aa22.73■■□□□ 1.23
PPFIA1-216ENST00000530746 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
PPFIA1-216ENST00000530746 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
PPFIA1-216ENST00000530746 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
PPFIA1-216ENST00000530746 TET3O43151 1660 aa22.67■■□□□ 1.22
PPFIA1-216ENST00000530746 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
PPFIA1-216ENST00000530746 PTPRTO14522 1441 aa22.65■■□□□ 1.22
PPFIA1-216ENST00000530746 GCC2Q8IWJ2 1684 aa22.65■■□□□ 1.22
PPFIA1-216ENST00000530746 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.22
PPFIA1-216ENST00000530746 PKD2Q13563 968 aa22.63■■□□□ 1.21
PPFIA1-216ENST00000530746 POLR1AO95602 1720 aaPredicted RBP22.62■■□□□ 1.21
PPFIA1-216ENST00000530746 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
PPFIA1-216ENST00000530746 RPRD2Q5VT52 1461 aaKnown RBP22.62■■□□□ 1.21
PPFIA1-216ENST00000530746 THEMISQ8N1K5 641 aaPredicted RBP22.62■■□□□ 1.21
PPFIA1-216ENST00000530746 UBR1Q8IWV7 1749 aa22.62■■□□□ 1.21
PPFIA1-216ENST00000530746 NAIPQ13075 1403 aa22.61■■□□□ 1.21
PPFIA1-216ENST00000530746 SYNMO15061 1565 aa22.59■■□□□ 1.21
PPFIA1-216ENST00000530746 NOS1P29475 1434 aa22.59■■□□□ 1.21
PPFIA1-216ENST00000530746 NUP155O75694 1391 aa22.59■■□□□ 1.21
PPFIA1-216ENST00000530746 E9PCH4 1651 aa22.58■■□□□ 1.21
PPFIA1-216ENST00000530746 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
PPFIA1-216ENST00000530746 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
PPFIA1-216ENST00000530746 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
PPFIA1-216ENST00000530746 NEURL4Q96JN8 1562 aa22.55■■□□□ 1.2
PPFIA1-216ENST00000530746 ANKLE2Q86XL3 938 aa22.54■■□□□ 1.2
PPFIA1-216ENST00000530746 IDI1Q13907 227 aa22.52■■□□□ 1.2
PPFIA1-216ENST00000530746 SLC52A1Q9NWF4 448 aa22.51■■□□□ 1.19
PPFIA1-216ENST00000530746 MED14O60244 1454 aa22.49■■□□□ 1.19
PPFIA1-216ENST00000530746 SLIT1O75093 1534 aa22.49■■□□□ 1.19
PPFIA1-216ENST00000530746 ARHGAP23Q9P227 1491 aa22.48■■□□□ 1.19
PPFIA1-216ENST00000530746 STAG3Q9UJ98 1225 aa22.48■■□□□ 1.19
PPFIA1-216ENST00000530746 ADGRB3O60242 1522 aa22.47■■□□□ 1.19
PPFIA1-216ENST00000530746 IQGAP1P46940 1657 aa22.47■■□□□ 1.19
PPFIA1-216ENST00000530746 CERKQ8TCT0 537 aa22.47■■□□□ 1.19
PPFIA1-216ENST00000530746 LTBP4Q8N2S1 1624 aa22.46■■□□□ 1.19
PPFIA1-216ENST00000530746 NPHP4O75161 1426 aaPredicted RBP22.46■■□□□ 1.19
PPFIA1-216ENST00000530746 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.19
PPFIA1-216ENST00000530746 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.18
PPFIA1-216ENST00000530746 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
PPFIA1-216ENST00000530746 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
PPFIA1-216ENST00000530746 ILDR1Q86SU0 546 aaPredicted RBP22.43■■□□□ 1.18
PPFIA1-216ENST00000530746 ZNF335Q9H4Z2 1342 aaPredicted RBP22.42■■□□□ 1.18
PPFIA1-216ENST00000530746 TRIM52Q96A61 297 aa22.42■■□□□ 1.18
PPFIA1-216ENST00000530746 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
PPFIA1-216ENST00000530746 LTKP29376 864 aa22.41■■□□□ 1.18
PPFIA1-216ENST00000530746 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
PPFIA1-216ENST00000530746 EID1Q9Y6B2 187 aa22.41■■□□□ 1.18
PPFIA1-216ENST00000530746 FBXO41Q8TF61 875 aa22.4■■□□□ 1.18
PPFIA1-216ENST00000530746 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
PPFIA1-216ENST00000530746 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
PPFIA1-216ENST00000530746 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
PPFIA1-216ENST00000530746 TRPM2O94759 1503 aa22.33■■□□□ 1.17
PPFIA1-216ENST00000530746 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.17
PPFIA1-216ENST00000530746 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
PPFIA1-216ENST00000530746 CPS1P31327 1500 aa22.31■■□□□ 1.16
PPFIA1-216ENST00000530746 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
PPFIA1-216ENST00000530746 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms