RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 KDM5DQ9BY66 1539 aa22.33■■□□□ 1.17
CTSB-218ENST00000530624 RNF17Q9BXT8 1623 aaKnown RBP22.33■■□□□ 1.17
CTSB-218ENST00000530624 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
CTSB-218ENST00000530624 HSPA2P54652 639 aa22.3■■□□□ 1.16
CTSB-218ENST00000530624 KIF15Q9NS87 1388 aa22.29■■□□□ 1.16
CTSB-218ENST00000530624 ERBINQ96RT1 1412 aa22.28■■□□□ 1.16
CTSB-218ENST00000530624 ADGRL2O95490 1459 aa22.26■■□□□ 1.15
CTSB-218ENST00000530624 MROH1Q8NDA8 1641 aa22.25■■□□□ 1.15
CTSB-218ENST00000530624 PZPP20742 1482 aa22.25■■□□□ 1.15
CTSB-218ENST00000530624 ZC3H13Q5T200 1668 aaKnown RBP22.25■■□□□ 1.15
CTSB-218ENST00000530624 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
CTSB-218ENST00000530624 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
CTSB-218ENST00000530624 NCOA1Q15788 1441 aa22.24■■□□□ 1.15
CTSB-218ENST00000530624 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
CTSB-218ENST00000530624 ZNF142P52746 1687 aaPredicted RBP22.22■■□□□ 1.15
CTSB-218ENST00000530624 ABCC3O15438 1527 aa22.21■■□□□ 1.15
CTSB-218ENST00000530624 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
CTSB-218ENST00000530624 MYO3AQ8NEV4 1616 aa22.21■■□□□ 1.15
CTSB-218ENST00000530624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.21■■□□□ 1.15
CTSB-218ENST00000530624 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
CTSB-218ENST00000530624 DEPDC5O75140 1603 aa22.2■■□□□ 1.14
CTSB-218ENST00000530624 STRCQ7RTU9 1775 aa22.18■■□□□ 1.14
CTSB-218ENST00000530624 CEP170BQ9Y4F5 1589 aaPredicted RBP22.17■■□□□ 1.14
CTSB-218ENST00000530624 CHIC2Q9UKJ5 165 aa22.17■■□□□ 1.14
CTSB-218ENST00000530624 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
CTSB-218ENST00000530624 TNRQ92752 1358 aa22.14■■□□□ 1.14
CTSB-218ENST00000530624 A2ML1A8K2U0 1454 aa22.14■■□□□ 1.13
CTSB-218ENST00000530624 FBXO31Q5XUX0 539 aaPredicted RBP22.13■■□□□ 1.13
CTSB-218ENST00000530624 PLA2R1Q13018 1463 aa22.13■■□□□ 1.13
CTSB-218ENST00000530624 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
CTSB-218ENST00000530624 ROCK1Q13464 1354 aa22.12■■□□□ 1.13
CTSB-218ENST00000530624 SPATA31D1Q6ZQQ2 1576 aa22.12■■□□□ 1.13
CTSB-218ENST00000530624 CAMSAP1Q5T5Y3 1602 aa22.12■■□□□ 1.13
CTSB-218ENST00000530624 PTPRTO14522 1441 aa22.12■■□□□ 1.13
CTSB-218ENST00000530624 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
CTSB-218ENST00000530624 CEP152O94986 1710 aa22.11■■□□□ 1.13
CTSB-218ENST00000530624 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
CTSB-218ENST00000530624 NLRP1Q9C000 1473 aa22.1■■□□□ 1.13
CTSB-218ENST00000530624 ANKRD50Q9ULJ7 1429 aa22.1■■□□□ 1.13
CTSB-218ENST00000530624 RRBP1Q9P2E9 1410 aaKnown RBP22.09■■□□□ 1.13
CTSB-218ENST00000530624 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
CTSB-218ENST00000530624 KANK1Q14678 1352 aa22.09■■□□□ 1.13
CTSB-218ENST00000530624 ERVK-7P63135 1459 aa22.08■■□□□ 1.12
CTSB-218ENST00000530624 PKD2Q13563 968 aa22.05■■□□□ 1.12
CTSB-218ENST00000530624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
CTSB-218ENST00000530624 UGGT1Q9NYU2 1555 aa22■■□□□ 1.11
CTSB-218ENST00000530624 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
CTSB-218ENST00000530624 UNC13BO14795 1591 aa21.99■■□□□ 1.11
CTSB-218ENST00000530624 THEMISQ8N1K5 641 aaPredicted RBP21.99■■□□□ 1.11
CTSB-218ENST00000530624 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
CTSB-218ENST00000530624 RPRD2Q5VT52 1461 aaKnown RBP21.96■■□□□ 1.11
CTSB-218ENST00000530624 ILDR1Q86SU0 546 aaPredicted RBP21.95■■□□□ 1.1
CTSB-218ENST00000530624 NOS1P29475 1434 aa21.94■■□□□ 1.1
CTSB-218ENST00000530624 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
CTSB-218ENST00000530624 TET3O43151 1660 aa21.93■■□□□ 1.1
CTSB-218ENST00000530624 ITGAEP38570 1179 aa21.93■■□□□ 1.1
CTSB-218ENST00000530624 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
CTSB-218ENST00000530624 UBR1Q8IWV7 1749 aa21.92■■□□□ 1.1
CTSB-218ENST00000530624 NEURL4Q96JN8 1562 aa21.92■■□□□ 1.1
CTSB-218ENST00000530624 CERKQ8TCT0 537 aa21.92■■□□□ 1.1
CTSB-218ENST00000530624 MED14O60244 1454 aa21.91■■□□□ 1.1
CTSB-218ENST00000530624 CFAP65Q6ZU64 1925 aaKnown RBP21.91■■□□□ 1.1
CTSB-218ENST00000530624 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
CTSB-218ENST00000530624 IQGAP3Q86VI3 1631 aa21.91■■□□□ 1.1
CTSB-218ENST00000530624 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
CTSB-218ENST00000530624 ANKLE2Q86XL3 938 aa21.9■■□□□ 1.1
CTSB-218ENST00000530624 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
CTSB-218ENST00000530624 SYNMO15061 1565 aa21.89■■□□□ 1.09
CTSB-218ENST00000530624 SLIT1O75093 1534 aa21.87■■□□□ 1.09
CTSB-218ENST00000530624 ARHGAP23Q9P227 1491 aa21.87■■□□□ 1.09
CTSB-218ENST00000530624 PIK3C2BO00750 1634 aa21.86■■□□□ 1.09
CTSB-218ENST00000530624 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
CTSB-218ENST00000530624 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
CTSB-218ENST00000530624 NAIPQ13075 1403 aa21.85■■□□□ 1.09
CTSB-218ENST00000530624 NUP155O75694 1391 aa21.84■■□□□ 1.09
CTSB-218ENST00000530624 NPHP4O75161 1426 aaPredicted RBP21.83■■□□□ 1.09
CTSB-218ENST00000530624 IDI1Q13907 227 aa21.83■■□□□ 1.09
CTSB-218ENST00000530624 HFM1A2PYH4 1435 aa21.82■■□□□ 1.08
CTSB-218ENST00000530624 E9PCH4 1651 aa21.82■■□□□ 1.08
CTSB-218ENST00000530624 SCAF11Q99590 1463 aaKnown RBP21.81■■□□□ 1.08
CTSB-218ENST00000530624 ZNF335Q9H4Z2 1342 aaPredicted RBP21.8■■□□□ 1.08
CTSB-218ENST00000530624 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
CTSB-218ENST00000530624 IQGAP1P46940 1657 aa21.8■■□□□ 1.08
CTSB-218ENST00000530624 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
CTSB-218ENST00000530624 LTKP29376 864 aa21.75■■□□□ 1.07
CTSB-218ENST00000530624 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
CTSB-218ENST00000530624 CPS1P31327 1500 aa21.75■■□□□ 1.07
CTSB-218ENST00000530624 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
CTSB-218ENST00000530624 EID1Q9Y6B2 187 aa21.74■■□□□ 1.07
CTSB-218ENST00000530624 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
CTSB-218ENST00000530624 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
CTSB-218ENST00000530624 SPHKAPQ2M3C7 1700 aa21.67■■□□□ 1.06
CTSB-218ENST00000530624 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
CTSB-218ENST00000530624 HDGFP51858 240 aaKnown RBP21.63■■□□□ 1.05
CTSB-218ENST00000530624 TRPM2O94759 1503 aa21.63■■□□□ 1.05
CTSB-218ENST00000530624 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
CTSB-218ENST00000530624 ACIN1Q9UKV3 1341 aaKnown RBP21.62■■□□□ 1.05
CTSB-218ENST00000530624 STRCP1A6NGW2 1772 aa21.61■■□□□ 1.05
CTSB-218ENST00000530624 PLEKHG1Q9ULL1 1385 aa21.61■■□□□ 1.05
CTSB-218ENST00000530624 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms