RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 ALKQ9UM73 1620 aa17.45■□□□□ 0.38
TM9SF1-210ENST00000530563 CPS1P31327 1500 aa17.45■□□□□ 0.38
TM9SF1-210ENST00000530563 TOM1O60784 492 aa17.44■□□□□ 0.38
TM9SF1-210ENST00000530563 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
TM9SF1-210ENST00000530563 TNRQ92752 1358 aa17.43■□□□□ 0.38
TM9SF1-210ENST00000530563 VWDEQ8N2E2 1590 aa17.43■□□□□ 0.38
TM9SF1-210ENST00000530563 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
TM9SF1-210ENST00000530563 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-210ENST00000530563 PZPP20742 1482 aa17.41■□□□□ 0.38
TM9SF1-210ENST00000530563 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
TM9SF1-210ENST00000530563 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
TM9SF1-210ENST00000530563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
TM9SF1-210ENST00000530563 MED14O60244 1454 aa17.39■□□□□ 0.37
TM9SF1-210ENST00000530563 KIF3BO15066 747 aa17.39■□□□□ 0.37
TM9SF1-210ENST00000530563 ANKLE2Q86XL3 938 aa17.39■□□□□ 0.37
TM9SF1-210ENST00000530563 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
TM9SF1-210ENST00000530563 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
TM9SF1-210ENST00000530563 FAM135AQ9P2D6 1515 aa17.37■□□□□ 0.37
TM9SF1-210ENST00000530563 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
TM9SF1-210ENST00000530563 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
TM9SF1-210ENST00000530563 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
TM9SF1-210ENST00000530563 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-210ENST00000530563 NLRP1Q9C000 1473 aa17.35■□□□□ 0.37
TM9SF1-210ENST00000530563 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
TM9SF1-210ENST00000530563 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
TM9SF1-210ENST00000530563 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
TM9SF1-210ENST00000530563 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
TM9SF1-210ENST00000530563 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
TM9SF1-210ENST00000530563 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
TM9SF1-210ENST00000530563 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
TM9SF1-210ENST00000530563 CAMSAP2Q08AD1 1489 aa17.28■□□□□ 0.36
TM9SF1-210ENST00000530563 IQGAP1P46940 1657 aa17.27■□□□□ 0.36
TM9SF1-210ENST00000530563 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
TM9SF1-210ENST00000530563 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.36
TM9SF1-210ENST00000530563 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
TM9SF1-210ENST00000530563 ABCC3O15438 1527 aa17.24■□□□□ 0.35
TM9SF1-210ENST00000530563 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
TM9SF1-210ENST00000530563 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-210ENST00000530563 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-210ENST00000530563 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-210ENST00000530563 ERVK-7P63135 1459 aa17.22■□□□□ 0.35
TM9SF1-210ENST00000530563 SYNMO15061 1565 aa17.21■□□□□ 0.35
TM9SF1-210ENST00000530563 TSPY4P0CV99 314 aa17.2■□□□□ 0.34
TM9SF1-210ENST00000530563 TSPY10P0CW01 314 aa17.2■□□□□ 0.34
TM9SF1-210ENST00000530563 LTKP29376 864 aa17.2■□□□□ 0.34
TM9SF1-210ENST00000530563 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
TM9SF1-210ENST00000530563 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
TM9SF1-210ENST00000530563 UBR1Q8IWV7 1749 aa17.17■□□□□ 0.34
TM9SF1-210ENST00000530563 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
TM9SF1-210ENST00000530563 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
TM9SF1-210ENST00000530563 XIRP1Q702N8 1843 aaKnown RBP17.16■□□□□ 0.34
TM9SF1-210ENST00000530563 SLIT1O75093 1534 aa17.16■□□□□ 0.34
TM9SF1-210ENST00000530563 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-210ENST00000530563 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
TM9SF1-210ENST00000530563 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
TM9SF1-210ENST00000530563 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
TM9SF1-210ENST00000530563 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
TM9SF1-210ENST00000530563 CEP152O94986 1710 aa17.1■□□□□ 0.33
TM9SF1-210ENST00000530563 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
TM9SF1-210ENST00000530563 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
TM9SF1-210ENST00000530563 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
TM9SF1-210ENST00000530563 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
TM9SF1-210ENST00000530563 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
TM9SF1-210ENST00000530563 KANK4Q5T7N3 995 aaPredicted RBP17.05■□□□□ 0.32
TM9SF1-210ENST00000530563 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
TM9SF1-210ENST00000530563 PRDM15P57071 1507 aaPredicted RBP17.05■□□□□ 0.32
TM9SF1-210ENST00000530563 TET3O43151 1660 aa17.04■□□□□ 0.32
TM9SF1-210ENST00000530563 PIK3C2BO00750 1634 aa17.04■□□□□ 0.32
TM9SF1-210ENST00000530563 KCNA6P17658 529 aa17.04■□□□□ 0.32
TM9SF1-210ENST00000530563 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
TM9SF1-210ENST00000530563 MYOM3Q5VTT5 1437 aa17.03■□□□□ 0.32
TM9SF1-210ENST00000530563 IDI1Q13907 227 aa17.02■□□□□ 0.32
TM9SF1-210ENST00000530563 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
TM9SF1-210ENST00000530563 KIF15Q9NS87 1388 aa17.01■□□□□ 0.31
TM9SF1-210ENST00000530563 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
TM9SF1-210ENST00000530563 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
TM9SF1-210ENST00000530563 ERBINQ96RT1 1412 aa17■□□□□ 0.31
TM9SF1-210ENST00000530563 ABCC5O15440 1437 aa16.99■□□□□ 0.31
TM9SF1-210ENST00000530563 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
TM9SF1-210ENST00000530563 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
TM9SF1-210ENST00000530563 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
TM9SF1-210ENST00000530563 KDM5AP29375 1690 aaKnown RBP16.99■□□□□ 0.31
TM9SF1-210ENST00000530563 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
TM9SF1-210ENST00000530563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
TM9SF1-210ENST00000530563 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
TM9SF1-210ENST00000530563 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
TM9SF1-210ENST00000530563 NWD1Q149M9 1564 aa16.95■□□□□ 0.3
TM9SF1-210ENST00000530563 NOS1P29475 1434 aa16.95■□□□□ 0.3
TM9SF1-210ENST00000530563 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
TM9SF1-210ENST00000530563 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
TM9SF1-210ENST00000530563 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
TM9SF1-210ENST00000530563 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
TM9SF1-210ENST00000530563 SETD1AO15047 1707 aaKnown RBP16.91■□□□□ 0.3
TM9SF1-210ENST00000530563 KANK1Q14678 1352 aa16.9■□□□□ 0.3
TM9SF1-210ENST00000530563 JCADQ9P266 1359 aa16.9■□□□□ 0.3
TM9SF1-210ENST00000530563 DAPK1P53355 1430 aa16.9■□□□□ 0.3
TM9SF1-210ENST00000530563 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
TM9SF1-210ENST00000530563 MSH6P52701 1360 aa16.89■□□□□ 0.3
TM9SF1-210ENST00000530563 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
TM9SF1-210ENST00000530563 ZFYVE9O95405 1425 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms