RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 MLECQ14165 292 aa16.68■□□□□ 0.26
CAPN1-218ENST00000530442 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
CAPN1-218ENST00000530442 MROH2AA6NES4 1674 aa16.67■□□□□ 0.26
CAPN1-218ENST00000530442 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
CAPN1-218ENST00000530442 UNC13BO14795 1591 aa16.67■□□□□ 0.26
CAPN1-218ENST00000530442 CEP152O94986 1710 aa16.67■□□□□ 0.26
CAPN1-218ENST00000530442 FAM135AQ9P2D6 1515 aa16.66■□□□□ 0.26
CAPN1-218ENST00000530442 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
CAPN1-218ENST00000530442 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
CAPN1-218ENST00000530442 NAIPQ13075 1403 aa16.65■□□□□ 0.26
CAPN1-218ENST00000530442 KIF3BO15066 747 aa16.65■□□□□ 0.26
CAPN1-218ENST00000530442 C3P01024 1663 aa16.64■□□□□ 0.25
CAPN1-218ENST00000530442 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
CAPN1-218ENST00000530442 PTPRMP28827 1452 aa16.63■□□□□ 0.25
CAPN1-218ENST00000530442 ABCC3O15438 1527 aa16.63■□□□□ 0.25
CAPN1-218ENST00000530442 GGT6Q6P531 493 aa16.62■□□□□ 0.25
CAPN1-218ENST00000530442 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
CAPN1-218ENST00000530442 CNTLNQ9NXG0 1405 aa16.61■□□□□ 0.25
CAPN1-218ENST00000530442 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
CAPN1-218ENST00000530442 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.24
CAPN1-218ENST00000530442 TET3O43151 1660 aa16.56■□□□□ 0.24
CAPN1-218ENST00000530442 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
CAPN1-218ENST00000530442 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
CAPN1-218ENST00000530442 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
CAPN1-218ENST00000530442 PZPP20742 1482 aa16.53■□□□□ 0.24
CAPN1-218ENST00000530442 ZMYM3Q14202 1370 aa16.52■□□□□ 0.24
CAPN1-218ENST00000530442 KANK1Q14678 1352 aa16.52■□□□□ 0.24
CAPN1-218ENST00000530442 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
CAPN1-218ENST00000530442 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.23
CAPN1-218ENST00000530442 E9PCH4 1651 aa16.51■□□□□ 0.23
CAPN1-218ENST00000530442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
CAPN1-218ENST00000530442 SETD5Q9C0A6 1442 aa16.51■□□□□ 0.23
CAPN1-218ENST00000530442 MYO3AQ8NEV4 1616 aa16.49■□□□□ 0.23
CAPN1-218ENST00000530442 CEBPAP49715 358 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-218ENST00000530442 NPATQ14207 1427 aa16.49■□□□□ 0.23
CAPN1-218ENST00000530442 ARHGAP31Q2M1Z3 1444 aa16.49■□□□□ 0.23
CAPN1-218ENST00000530442 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
CAPN1-218ENST00000530442 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
CAPN1-218ENST00000530442 CFAP65Q6ZU64 1925 aaKnown RBP16.48■□□□□ 0.23
CAPN1-218ENST00000530442 NUP155O75694 1391 aa16.48■□□□□ 0.23
CAPN1-218ENST00000530442 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
CAPN1-218ENST00000530442 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
CAPN1-218ENST00000530442 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-218ENST00000530442 ZNF142P52746 1687 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-218ENST00000530442 SYNMO15061 1565 aa16.44■□□□□ 0.22
CAPN1-218ENST00000530442 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
CAPN1-218ENST00000530442 SETD1BQ9UPS6 1966 aaKnown RBP16.44■□□□□ 0.22
CAPN1-218ENST00000530442 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
CAPN1-218ENST00000530442 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CAPN1-218ENST00000530442 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-218ENST00000530442 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-218ENST00000530442 CEP170BQ9Y4F5 1589 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-218ENST00000530442 NOS1P29475 1434 aa16.4■□□□□ 0.22
CAPN1-218ENST00000530442 TNRQ92752 1358 aa16.39■□□□□ 0.21
CAPN1-218ENST00000530442 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
CAPN1-218ENST00000530442 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
CAPN1-218ENST00000530442 UHRF1BP1Q6BDS2 1440 aa16.38■□□□□ 0.21
CAPN1-218ENST00000530442 UGGT1Q9NYU2 1555 aa16.37■□□□□ 0.21
CAPN1-218ENST00000530442 NLRP1Q9C000 1473 aa16.36■□□□□ 0.21
CAPN1-218ENST00000530442 TRPM2O94759 1503 aa16.36■□□□□ 0.21
CAPN1-218ENST00000530442 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
CAPN1-218ENST00000530442 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
CAPN1-218ENST00000530442 HRCP23327 699 aa16.34■□□□□ 0.21
CAPN1-218ENST00000530442 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
CAPN1-218ENST00000530442 PTPRTO14522 1441 aa16.34■□□□□ 0.21
CAPN1-218ENST00000530442 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
CAPN1-218ENST00000530442 KDM5AP29375 1690 aaKnown RBP16.34■□□□□ 0.21
CAPN1-218ENST00000530442 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
CAPN1-218ENST00000530442 MYO5BQ9ULV0 1848 aa16.33■□□□□ 0.2
CAPN1-218ENST00000530442 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
CAPN1-218ENST00000530442 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
CAPN1-218ENST00000530442 PKD2Q13563 968 aa16.31■□□□□ 0.2
CAPN1-218ENST00000530442 MPHOSPH9Q99550 1183 aa16.31■□□□□ 0.2
CAPN1-218ENST00000530442 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
CAPN1-218ENST00000530442 FOXD1Q16676 465 aa16.28■□□□□ 0.2
CAPN1-218ENST00000530442 POLR1AO95602 1720 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-218ENST00000530442 KIF1BO60333 1816 aa16.27■□□□□ 0.2
CAPN1-218ENST00000530442 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
CAPN1-218ENST00000530442 STRCQ7RTU9 1775 aa16.27■□□□□ 0.2
CAPN1-218ENST00000530442 HSPA2P54652 639 aa16.25■□□□□ 0.19
CAPN1-218ENST00000530442 IDI1Q13907 227 aa16.25■□□□□ 0.19
CAPN1-218ENST00000530442 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
CAPN1-218ENST00000530442 SLIT1O75093 1534 aa16.23■□□□□ 0.19
CAPN1-218ENST00000530442 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
CAPN1-218ENST00000530442 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
CAPN1-218ENST00000530442 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
CAPN1-218ENST00000530442 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
CAPN1-218ENST00000530442 ANKRD30BQ9BXX2 1392 aa16.2■□□□□ 0.18
CAPN1-218ENST00000530442 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
CAPN1-218ENST00000530442 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
CAPN1-218ENST00000530442 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
CAPN1-218ENST00000530442 THEMISQ8N1K5 641 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-218ENST00000530442 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
CAPN1-218ENST00000530442 PPLO60437 1756 aa16.16■□□□□ 0.18
CAPN1-218ENST00000530442 IQGAP1P46940 1657 aa16.16■□□□□ 0.18
CAPN1-218ENST00000530442 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
CAPN1-218ENST00000530442 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
CAPN1-218ENST00000530442 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
CAPN1-218ENST00000530442 RIMS2Q9UQ26 1411 aa16.14■□□□□ 0.17
CAPN1-218ENST00000530442 MED14O60244 1454 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms