RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
SCARNA9-201ENST00000530422 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
SCARNA9-201ENST00000530422 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
SCARNA9-201ENST00000530422 TMCO4Q5TGY1 634 aa12.07□□□□□ -0.48
SCARNA9-201ENST00000530422 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
SCARNA9-201ENST00000530422 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
SCARNA9-201ENST00000530422 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.489e-31■■□□□ 12.9
SCARNA9-201ENST00000530422 PUS7Q96PZ0 661 aaKnown RBP12.06□□□□□ -0.48
SCARNA9-201ENST00000530422 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
SCARNA9-201ENST00000530422 A6NJR5 290 aa12.04□□□□□ -0.48
SCARNA9-201ENST00000530422 AEBP1Q8IUX7 1158 aa12.04□□□□□ -0.48
SCARNA9-201ENST00000530422 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
SCARNA9-201ENST00000530422 TRAK2O60296 914 aa12.02□□□□□ -0.49
SCARNA9-201ENST00000530422 RBM25P49756 843 aaKnown RBP12.01□□□□□ -0.49
SCARNA9-201ENST00000530422 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
SCARNA9-201ENST00000530422 TAF7LQ5H9L4 462 aa11.98□□□□□ -0.49
SCARNA9-201ENST00000530422 NEFLP07196 543 aa11.97□□□□□ -0.49
SCARNA9-201ENST00000530422 E2F4Q16254 413 aa11.97□□□□□ -0.49
SCARNA9-201ENST00000530422 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
SCARNA9-201ENST00000530422 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
SCARNA9-201ENST00000530422 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
SCARNA9-201ENST00000530422 PDE4CQ08493 712 aa11.95□□□□□ -0.5
SCARNA9-201ENST00000530422 PDE4DQ08499 809 aa11.95□□□□□ -0.5
SCARNA9-201ENST00000530422 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
SCARNA9-201ENST00000530422 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
SCARNA9-201ENST00000530422 NUDT7P0C024 238 aa11.94□□□□□ -0.5
SCARNA9-201ENST00000530422 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
SCARNA9-201ENST00000530422 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
SCARNA9-201ENST00000530422 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
SCARNA9-201ENST00000530422 E9PSI1 815 aa11.92□□□□□ -0.5
SCARNA9-201ENST00000530422 TRIM66O15016 1216 aa11.92□□□□□ -0.5
SCARNA9-201ENST00000530422 KRI1Q8N9T8 703 aaKnown RBP11.92□□□□□ -0.5
SCARNA9-201ENST00000530422 PCDHGA4Q9Y5G9 962 aa11.91□□□□□ -0.5
SCARNA9-201ENST00000530422 SLC34A2O95436 690 aa11.9□□□□□ -0.5
SCARNA9-201ENST00000530422 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
SCARNA9-201ENST00000530422 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
SCARNA9-201ENST00000530422 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
SCARNA9-201ENST00000530422 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
SCARNA9-201ENST00000530422 LHX6Q9UPM6 363 aa11.87□□□□□ -0.51
SCARNA9-201ENST00000530422 FOXK1P85037 733 aa11.84□□□□□ -0.51
SCARNA9-201ENST00000530422 DSG2Q14126 1118 aa11.84□□□□□ -0.51
SCARNA9-201ENST00000530422 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
SCARNA9-201ENST00000530422 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
SCARNA9-201ENST00000530422 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
SCARNA9-201ENST00000530422 CCDC97Q96F63 343 aaPredicted RBP11.83□□□□□ -0.52
SCARNA9-201ENST00000530422 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
SCARNA9-201ENST00000530422 GPIHBP1Q8IV16 184 aa11.82□□□□□ -0.52
SCARNA9-201ENST00000530422 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
SCARNA9-201ENST00000530422 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
SCARNA9-201ENST00000530422 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
SCARNA9-201ENST00000530422 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
SCARNA9-201ENST00000530422 PTCD2Q8WV60 388 aaKnown RBP11.79□□□□□ -0.52
SCARNA9-201ENST00000530422 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
SCARNA9-201ENST00000530422 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
SCARNA9-201ENST00000530422 IRF5Q13568 498 aa11.77□□□□□ -0.53
SCARNA9-201ENST00000530422 GOPCQ9HD26 462 aa11.77□□□□□ -0.53
SCARNA9-201ENST00000530422 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.53
SCARNA9-201ENST00000530422 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.531e-323■□□□□ 9.9
SCARNA9-201ENST00000530422 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
SCARNA9-201ENST00000530422 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
SCARNA9-201ENST00000530422 PROSER2Q86WR7 435 aaPredicted RBP11.75□□□□□ -0.53
SCARNA9-201ENST00000530422 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
SCARNA9-201ENST00000530422 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
SCARNA9-201ENST00000530422 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
SCARNA9-201ENST00000530422 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
SCARNA9-201ENST00000530422 RBM26Q5T8P6 1007 aaKnown RBP11.73□□□□□ -0.53
SCARNA9-201ENST00000530422 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
SCARNA9-201ENST00000530422 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
SCARNA9-201ENST00000530422 BCCIPQ9P287 314 aaKnown RBP eCLIP11.73□□□□□ -0.531e-12■■■□□ 15.2
SCARNA9-201ENST00000530422 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
SCARNA9-201ENST00000530422 MCM6Q14566 821 aa11.71□□□□□ -0.53
SCARNA9-201ENST00000530422 AMOTL2Q9Y2J4 779 aa11.71□□□□□ -0.53
SCARNA9-201ENST00000530422 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.543e-19■□□□□ 11
SCARNA9-201ENST00000530422 PBX2P40425 430 aa11.69□□□□□ -0.54
SCARNA9-201ENST00000530422 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
SCARNA9-201ENST00000530422 PKNOX2Q96KN3 472 aa11.69□□□□□ -0.54
SCARNA9-201ENST00000530422 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
SCARNA9-201ENST00000530422 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
SCARNA9-201ENST00000530422 NISCHQ9Y2I1 1504 aa11.67□□□□□ -0.54
SCARNA9-201ENST00000530422 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
SCARNA9-201ENST00000530422 ZNF326Q5BKZ1 582 aaKnown RBP11.66□□□□□ -0.54
SCARNA9-201ENST00000530422 TBC1D12O60347 775 aa11.64□□□□□ -0.55
SCARNA9-201ENST00000530422 PSEN2P49810 448 aa11.64□□□□□ -0.55
SCARNA9-201ENST00000530422 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
SCARNA9-201ENST00000530422 ARHGAP33O14559 1287 aa11.63□□□□□ -0.55
SCARNA9-201ENST00000530422 PDE4AP27815 886 aa11.63□□□□□ -0.55
SCARNA9-201ENST00000530422 PTGER2P43116 358 aa11.63□□□□□ -0.55
SCARNA9-201ENST00000530422 DMRTA1Q5VZB9 504 aa11.62□□□□□ -0.55
SCARNA9-201ENST00000530422 FAM177A1Q8N128 213 aaPredicted RBP11.62□□□□□ -0.55
SCARNA9-201ENST00000530422 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
SCARNA9-201ENST00000530422 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
SCARNA9-201ENST00000530422 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
SCARNA9-201ENST00000530422 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
SCARNA9-201ENST00000530422 KCNA1Q09470 495 aa11.59□□□□□ -0.55
SCARNA9-201ENST00000530422 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
SCARNA9-201ENST00000530422 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
SCARNA9-201ENST00000530422 AMHR2Q16671 573 aa11.58□□□□□ -0.56
SCARNA9-201ENST00000530422 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
SCARNA9-201ENST00000530422 PARP9Q8IXQ6 854 aa11.57□□□□□ -0.56
SCARNA9-201ENST00000530422 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms