RNA–Protein interactions for RNA: ENST00000530167.1

H2AFX-202, Transcript of H2A histone family member X, humanhuman

APPRIS P1 BASIC

Gene H2AFX, Length 1,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-202ENST00000530167 RAB3GAP2Q9H2M9 1393 aa31.42■■■□□ 2.62
H2AFX-202ENST00000530167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.42■■■□□ 2.624e-8■■■□□ 14.6
H2AFX-202ENST00000530167 DEPDC5O75140 1603 aa31.41■■■□□ 2.62
H2AFX-202ENST00000530167 MROH1Q8NDA8 1641 aa31.4■■■□□ 2.62
H2AFX-202ENST00000530167 UNC13BO14795 1591 aa31.38■■■□□ 2.61
H2AFX-202ENST00000530167 PRDM15P57071 1507 aaPredicted RBP31.37■■■□□ 2.61
H2AFX-202ENST00000530167 TRIM52Q96A61 297 aa31.34■■■□□ 2.61
H2AFX-202ENST00000530167 PPP6R1Q9UPN7 881 aa31.34■■■□□ 2.61
H2AFX-202ENST00000530167 KANK1Q14678 1352 aa31.34■■■□□ 2.61
H2AFX-202ENST00000530167 NUP155O75694 1391 aa31.32■■■□□ 2.6
H2AFX-202ENST00000530167 ADAMTSL3P82987 1691 aa31.32■■■□□ 2.6
H2AFX-202ENST00000530167 WASHC2CQ9Y4E1 1318 aa31.32■■■□□ 2.6
H2AFX-202ENST00000530167 ESF1Q9H501 851 aaKnown RBP31.31■■■□□ 2.6
H2AFX-202ENST00000530167 FER1L4A9Z1Z3 1794 aa31.3■■■□□ 2.6
H2AFX-202ENST00000530167 HRCP23327 699 aa31.29■■■□□ 2.6
H2AFX-202ENST00000530167 MADDQ8WXG6 1647 aa31.29■■■□□ 2.6
H2AFX-202ENST00000530167 KDM5DQ9BY66 1539 aa31.28■■■□□ 2.6
H2AFX-202ENST00000530167 VWDEQ8N2E2 1590 aa31.28■■■□□ 2.6
H2AFX-202ENST00000530167 CEP152O94986 1710 aa31.27■■■□□ 2.6
H2AFX-202ENST00000530167 CLTCQ00610 1675 aaKnown RBP31.27■■■□□ 2.6
H2AFX-202ENST00000530167 ACIN1Q9UKV3 1341 aaKnown RBP31.26■■■□□ 2.6
H2AFX-202ENST00000530167 ABCC3O15438 1527 aa31.26■■■□□ 2.6
H2AFX-202ENST00000530167 FAM135AQ9P2D6 1515 aa31.26■■■□□ 2.6
H2AFX-202ENST00000530167 ZC3H13Q5T200 1668 aaKnown RBP31.25■■■□□ 2.59
H2AFX-202ENST00000530167 IQGAP3Q86VI3 1631 aa31.25■■■□□ 2.59
H2AFX-202ENST00000530167 CNTLNQ9NXG0 1405 aa31.23■■■□□ 2.59
H2AFX-202ENST00000530167 RIMS1Q86UR5 1692 aaKnown RBP31.22■■■□□ 2.59
H2AFX-202ENST00000530167 KDM4FA0A1W2PPD8 638 aa31.21■■■□□ 2.59
H2AFX-202ENST00000530167 LMTK2Q8IWU2 1503 aa31.2■■■□□ 2.58
H2AFX-202ENST00000530167 PZPP20742 1482 aa31.18■■■□□ 2.58
H2AFX-202ENST00000530167 CAMSAP1Q5T5Y3 1602 aa31.18■■■□□ 2.58
H2AFX-202ENST00000530167 SLC4A1APQ9BWU0 796 aaKnown RBP31.16■■■□□ 2.58
H2AFX-202ENST00000530167 MROH2AA6NES4 1674 aa31.16■■■□□ 2.58
H2AFX-202ENST00000530167 ZMYM3Q14202 1370 aa31.16■■■□□ 2.58
H2AFX-202ENST00000530167 TET3O43151 1660 aa31.16■■■□□ 2.58
H2AFX-202ENST00000530167 MPHOSPH9Q99550 1183 aa31.13■■■□□ 2.57
H2AFX-202ENST00000530167 EFCAB6Q5THR3 1501 aa31.13■■■□□ 2.57
H2AFX-202ENST00000530167 PLPPR3Q6T4P5 718 aa31.11■■■□□ 2.57
H2AFX-202ENST00000530167 CEBPAP49715 358 aaPredicted RBP31.1■■■□□ 2.57
H2AFX-202ENST00000530167 C3P01024 1663 aa31.1■■■□□ 2.57
H2AFX-202ENST00000530167 PTPRMP28827 1452 aa31.1■■■□□ 2.57
H2AFX-202ENST00000530167 NPATQ14207 1427 aa31.09■■■□□ 2.57
H2AFX-202ENST00000530167 ARHGAP31Q2M1Z3 1444 aa31.09■■■□□ 2.57
H2AFX-202ENST00000530167 PKD2Q13563 968 aa31.08■■■□□ 2.57
H2AFX-202ENST00000530167 E9PCH4 1651 aa31.07■■■□□ 2.57
H2AFX-202ENST00000530167 CFAP65Q6ZU64 1925 aaKnown RBP31.05■■■□□ 2.56
H2AFX-202ENST00000530167 RPRD2Q5VT52 1461 aaKnown RBP31.03■■■□□ 2.56
H2AFX-202ENST00000530167 FBXO31Q5XUX0 539 aaPredicted RBP31.02■■■□□ 2.56
H2AFX-202ENST00000530167 FOXD1Q16676 465 aa31.01■■■□□ 2.55
H2AFX-202ENST00000530167 PREX1Q8TCU6 1659 aa30.99■■■□□ 2.55
H2AFX-202ENST00000530167 ERVK-7P63135 1459 aa30.97■■■□□ 2.55
H2AFX-202ENST00000530167 DHX57Q6P158 1386 aaKnown RBP30.96■■■□□ 2.55
H2AFX-202ENST00000530167 SPATA31D1Q6ZQQ2 1576 aa30.95■■■□□ 2.54
H2AFX-202ENST00000530167 NOS1P29475 1434 aa30.92■■■□□ 2.54
H2AFX-202ENST00000530167 SPHKAPQ2M3C7 1700 aa30.91■■■□□ 2.54
H2AFX-202ENST00000530167 TNRQ92752 1358 aa30.9■■■□□ 2.54
H2AFX-202ENST00000530167 PTPRTO14522 1441 aa30.89■■■□□ 2.54
H2AFX-202ENST00000530167 SYNMO15061 1565 aa30.88■■■□□ 2.53
H2AFX-202ENST00000530167 PLA2R1Q13018 1463 aa30.86■■■□□ 2.53
H2AFX-202ENST00000530167 TRPM2O94759 1503 aa30.84■■■□□ 2.53
H2AFX-202ENST00000530167 SETD1BQ9UPS6 1966 aaKnown RBP30.83■■■□□ 2.53
H2AFX-202ENST00000530167 ANKRD30BQ9BXX2 1392 aa30.82■■■□□ 2.52
H2AFX-202ENST00000530167 UGGT1Q9NYU2 1555 aa30.81■■■□□ 2.52
H2AFX-202ENST00000530167 SLC52A1Q9NWF4 448 aa30.8■■■□□ 2.52
H2AFX-202ENST00000530167 IDI1Q13907 227 aa30.79■■■□□ 2.52
H2AFX-202ENST00000530167 MYO3AQ8NEV4 1616 aa30.79■■■□□ 2.52
H2AFX-202ENST00000530167 NLRP1Q9C000 1473 aa30.77■■■□□ 2.52
H2AFX-202ENST00000530167 CCDC144AA2RUR9 1427 aa30.77■■■□□ 2.52
H2AFX-202ENST00000530167 PIK3C2BO00750 1634 aa30.77■■■□□ 2.52
H2AFX-202ENST00000530167 CLTCL1P53675 1640 aa30.76■■■□□ 2.52
H2AFX-202ENST00000530167 UHRF1BP1Q6BDS2 1440 aa30.74■■■□□ 2.51
H2AFX-202ENST00000530167 CCER1Q8TC90 406 aaPredicted RBP30.74■■■□□ 2.51
H2AFX-202ENST00000530167 CEP170BQ9Y4F5 1589 aaPredicted RBP30.7■■■□□ 2.51
H2AFX-202ENST00000530167 A2ML1A8K2U0 1454 aa30.7■■■□□ 2.5
H2AFX-202ENST00000530167 CHGAP10645 457 aaKnown RBP30.69■■■□□ 2.5
H2AFX-202ENST00000530167 STAG3Q9UJ98 1225 aa30.69■■■□□ 2.5
H2AFX-202ENST00000530167 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
H2AFX-202ENST00000530167 ZNF142P52746 1687 aaPredicted RBP30.68■■■□□ 2.5
H2AFX-202ENST00000530167 KIF1BO60333 1816 aa30.66■■■□□ 2.5
H2AFX-202ENST00000530167 SIN3AQ96ST3 1273 aa30.65■■■□□ 2.5
H2AFX-202ENST00000530167 ADGRB3O60242 1522 aa30.65■■■□□ 2.5
H2AFX-202ENST00000530167 UBR1Q8IWV7 1749 aa30.64■■■□□ 2.5
H2AFX-202ENST00000530167 TMEM131LA2VDJ0 1609 aa30.63■■■□□ 2.49
H2AFX-202ENST00000530167 CLSPNQ9HAW4 1339 aa30.62■■■□□ 2.49
H2AFX-202ENST00000530167 MYO5BQ9ULV0 1848 aa30.61■■■□□ 2.49
H2AFX-202ENST00000530167 KDM5AP29375 1690 aaKnown RBP30.61■■■□□ 2.49
H2AFX-202ENST00000530167 LMTK3Q96Q04 1460 aa30.61■■■□□ 2.49
H2AFX-202ENST00000530167 NEUROD1Q13562 356 aa30.61■■■□□ 2.49
H2AFX-202ENST00000530167 THEMISQ8N1K5 641 aaPredicted RBP30.59■■■□□ 2.49
H2AFX-202ENST00000530167 RGL3Q3MIN7 710 aa30.56■■■□□ 2.48
H2AFX-202ENST00000530167 ZNF326Q5BKZ1 582 aaKnown RBP30.56■■■□□ 2.48
H2AFX-202ENST00000530167 SPATA31E1Q6ZUB1 1445 aa30.56■■■□□ 2.48
H2AFX-202ENST00000530167 HSPA2P54652 639 aa30.53■■■□□ 2.48
H2AFX-202ENST00000530167 NEURL4Q96JN8 1562 aa30.53■■■□□ 2.48
H2AFX-202ENST00000530167 TMEM2Q9UHN6 1383 aa30.5■■■□□ 2.47
H2AFX-202ENST00000530167 SLIT1O75093 1534 aa30.47■■■□□ 2.47
H2AFX-202ENST00000530167 RIMS2Q9UQ26 1411 aa30.46■■■□□ 2.47
H2AFX-202ENST00000530167 ARHGAP23Q9P227 1491 aa30.46■■■□□ 2.47
H2AFX-202ENST00000530167 RPGRIP1LQ68CZ1 1315 aa30.44■■■□□ 2.46
H2AFX-202ENST00000530167 NEXMIFQ5QGS0 1516 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms