RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 MAP3K7O43318 606 aa11.85□□□□□ -0.51
CAPRIN1-208ENST00000530008 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
CAPRIN1-208ENST00000530008 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
CAPRIN1-208ENST00000530008 MDM2Q00987 491 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-208ENST00000530008 A6NJR5 290 aa11.83□□□□□ -0.52
CAPRIN1-208ENST00000530008 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-208ENST00000530008 PHOX2BQ99453 314 aa11.83□□□□□ -0.52
CAPRIN1-208ENST00000530008 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
CAPRIN1-208ENST00000530008 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
CAPRIN1-208ENST00000530008 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
CAPRIN1-208ENST00000530008 SSTR3P32745 418 aaPredicted RBP11.8□□□□□ -0.52
CAPRIN1-208ENST00000530008 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
CAPRIN1-208ENST00000530008 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
CAPRIN1-208ENST00000530008 CLUAP1Q96AJ1 413 aa11.8□□□□□ -0.52
CAPRIN1-208ENST00000530008 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
CAPRIN1-208ENST00000530008 MCM6Q14566 821 aa11.79□□□□□ -0.52
CAPRIN1-208ENST00000530008 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
CAPRIN1-208ENST00000530008 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
CAPRIN1-208ENST00000530008 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
CAPRIN1-208ENST00000530008 TRAK2O60296 914 aa11.78□□□□□ -0.52
CAPRIN1-208ENST00000530008 GABBR2O75899 941 aa11.78□□□□□ -0.52
CAPRIN1-208ENST00000530008 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
CAPRIN1-208ENST00000530008 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
CAPRIN1-208ENST00000530008 C7P10643 843 aa11.75□□□□□ -0.53
CAPRIN1-208ENST00000530008 FBXW7Q969H0 707 aa11.75□□□□□ -0.53
CAPRIN1-208ENST00000530008 FAM217BQ9NTX9 383 aaPredicted RBP11.75□□□□□ -0.53
CAPRIN1-208ENST00000530008 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
CAPRIN1-208ENST00000530008 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
CAPRIN1-208ENST00000530008 PCDHGA4Q9Y5G9 962 aa11.74□□□□□ -0.53
CAPRIN1-208ENST00000530008 OATP04181 439 aa11.73□□□□□ -0.53
CAPRIN1-208ENST00000530008 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
CAPRIN1-208ENST00000530008 PROCA1Q8NCQ7 364 aaPredicted RBP11.73□□□□□ -0.53
CAPRIN1-208ENST00000530008 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
CAPRIN1-208ENST00000530008 POTEHQ6S545 545 aa11.71□□□□□ -0.53
CAPRIN1-208ENST00000530008 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
CAPRIN1-208ENST00000530008 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.53
CAPRIN1-208ENST00000530008 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
CAPRIN1-208ENST00000530008 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
CAPRIN1-208ENST00000530008 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
CAPRIN1-208ENST00000530008 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
CAPRIN1-208ENST00000530008 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
CAPRIN1-208ENST00000530008 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
CAPRIN1-208ENST00000530008 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
CAPRIN1-208ENST00000530008 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
CAPRIN1-208ENST00000530008 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
CAPRIN1-208ENST00000530008 HRCP23327 699 aa11.67□□□□□ -0.54
CAPRIN1-208ENST00000530008 FOSBP53539 338 aa11.67□□□□□ -0.54
CAPRIN1-208ENST00000530008 MYSM1Q5VVJ2 828 aa11.67□□□□□ -0.54
CAPRIN1-208ENST00000530008 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAPRIN1-208ENST00000530008 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
CAPRIN1-208ENST00000530008 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
CAPRIN1-208ENST00000530008 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
CAPRIN1-208ENST00000530008 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
CAPRIN1-208ENST00000530008 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
CAPRIN1-208ENST00000530008 RAD21O60216 631 aa11.64□□□□□ -0.55
CAPRIN1-208ENST00000530008 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
CAPRIN1-208ENST00000530008 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
CAPRIN1-208ENST00000530008 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
CAPRIN1-208ENST00000530008 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
CAPRIN1-208ENST00000530008 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
CAPRIN1-208ENST00000530008 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
CAPRIN1-208ENST00000530008 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
CAPRIN1-208ENST00000530008 PDIA4P13667 645 aaKnown RBP11.6□□□□□ -0.55
CAPRIN1-208ENST00000530008 DIXDC1Q155Q3 683 aa11.59□□□□□ -0.55
CAPRIN1-208ENST00000530008 BANK1Q8NDB2 785 aa11.59□□□□□ -0.55
CAPRIN1-208ENST00000530008 RBM46Q8TBY0 533 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-208ENST00000530008 RFC5P40937 340 aa11.58□□□□□ -0.56
CAPRIN1-208ENST00000530008 PRSS12P56730 875 aa11.58□□□□□ -0.56
CAPRIN1-208ENST00000530008 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
CAPRIN1-208ENST00000530008 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
CAPRIN1-208ENST00000530008 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
CAPRIN1-208ENST00000530008 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
CAPRIN1-208ENST00000530008 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
CAPRIN1-208ENST00000530008 LIMD1Q9UGP4 676 aa11.55□□□□□ -0.56
CAPRIN1-208ENST00000530008 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
CAPRIN1-208ENST00000530008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
CAPRIN1-208ENST00000530008 TMEM259Q4ZIN3 620 aa11.54□□□□□ -0.56
CAPRIN1-208ENST00000530008 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
CAPRIN1-208ENST00000530008 CCDC97Q96F63 343 aaPredicted RBP11.54□□□□□ -0.56
CAPRIN1-208ENST00000530008 NUDT7P0C024 238 aa11.53□□□□□ -0.56
CAPRIN1-208ENST00000530008 PPP2R2DQ66LE6 453 aa11.53□□□□□ -0.56
CAPRIN1-208ENST00000530008 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
CAPRIN1-208ENST00000530008 SPIRE2Q8WWL2 714 aa11.53□□□□□ -0.56
CAPRIN1-208ENST00000530008 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
CAPRIN1-208ENST00000530008 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.573e-12■■■■□ 20.6
CAPRIN1-208ENST00000530008 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
CAPRIN1-208ENST00000530008 CD46P15529 392 aa11.5□□□□□ -0.57
CAPRIN1-208ENST00000530008 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
CAPRIN1-208ENST00000530008 ZBTB7CA1YPR0 619 aa11.49□□□□□ -0.57
CAPRIN1-208ENST00000530008 SPTLC1O15269 473 aa11.49□□□□□ -0.57
CAPRIN1-208ENST00000530008 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
CAPRIN1-208ENST00000530008 EYA1Q99502 592 aa11.49□□□□□ -0.57
CAPRIN1-208ENST00000530008 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
CAPRIN1-208ENST00000530008 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
CAPRIN1-208ENST00000530008 ZNF330Q9Y3S2 320 aaPredicted RBP11.48□□□□□ -0.57
CAPRIN1-208ENST00000530008 SULF1Q8IWU6 871 aa11.47□□□□□ -0.57
CAPRIN1-208ENST00000530008 MTMR14Q8NCE2 650 aa11.47□□□□□ -0.57
CAPRIN1-208ENST00000530008 COL9A1P20849 921 aa11.46□□□□□ -0.57
CAPRIN1-208ENST00000530008 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
CAPRIN1-208ENST00000530008 NUTM1Q86Y26 1132 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms