RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
UBASH3B-205ENST00000529998 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
UBASH3B-205ENST00000529998 CLTCQ00610 1675 aaKnown RBP13.26□□□□□ -0.29
UBASH3B-205ENST00000529998 EIF2AK4Q9P2K8 1649 aaKnown RBP13.26□□□□□ -0.29
UBASH3B-205ENST00000529998 CEBPAP49715 358 aaPredicted RBP13.25□□□□□ -0.29
UBASH3B-205ENST00000529998 C3P01024 1663 aa13.24□□□□□ -0.29
UBASH3B-205ENST00000529998 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-205ENST00000529998 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-205ENST00000529998 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
UBASH3B-205ENST00000529998 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
UBASH3B-205ENST00000529998 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
UBASH3B-205ENST00000529998 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
UBASH3B-205ENST00000529998 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
UBASH3B-205ENST00000529998 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
UBASH3B-205ENST00000529998 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
UBASH3B-205ENST00000529998 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
UBASH3B-205ENST00000529998 CEP152O94986 1710 aa13.19□□□□□ -0.3
UBASH3B-205ENST00000529998 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
UBASH3B-205ENST00000529998 ANKRD50Q9ULJ7 1429 aa13.19□□□□□ -0.3
UBASH3B-205ENST00000529998 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
UBASH3B-205ENST00000529998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBASH3B-205ENST00000529998 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-205ENST00000529998 ZC3H13Q5T200 1668 aaKnown RBP13.17□□□□□ -0.3
UBASH3B-205ENST00000529998 ABCC3O15438 1527 aa13.17□□□□□ -0.3
UBASH3B-205ENST00000529998 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
UBASH3B-205ENST00000529998 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
UBASH3B-205ENST00000529998 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
UBASH3B-205ENST00000529998 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.31
UBASH3B-205ENST00000529998 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
UBASH3B-205ENST00000529998 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
UBASH3B-205ENST00000529998 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
UBASH3B-205ENST00000529998 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
UBASH3B-205ENST00000529998 NAIPQ13075 1403 aa13.13□□□□□ -0.31
UBASH3B-205ENST00000529998 LMTK3Q96Q04 1460 aa13.13□□□□□ -0.31
UBASH3B-205ENST00000529998 NPATQ14207 1427 aa13.13□□□□□ -0.31
UBASH3B-205ENST00000529998 UNC13BO14795 1591 aa13.12□□□□□ -0.31
UBASH3B-205ENST00000529998 PZPP20742 1482 aa13.12□□□□□ -0.31
UBASH3B-205ENST00000529998 KANK1Q14678 1352 aa13.12□□□□□ -0.31
UBASH3B-205ENST00000529998 LMTK2Q8IWU2 1503 aa13.1□□□□□ -0.31
UBASH3B-205ENST00000529998 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
UBASH3B-205ENST00000529998 HSPA2P54652 639 aa13.09□□□□□ -0.31
UBASH3B-205ENST00000529998 UHRF1BP1Q6BDS2 1440 aa13.09□□□□□ -0.31
UBASH3B-205ENST00000529998 ARHGAP31Q2M1Z3 1444 aa13.08□□□□□ -0.32
UBASH3B-205ENST00000529998 IQGAP3Q86VI3 1631 aa13.08□□□□□ -0.32
UBASH3B-205ENST00000529998 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
UBASH3B-205ENST00000529998 TET3O43151 1660 aa13.07□□□□□ -0.32
UBASH3B-205ENST00000529998 EFCAB6Q5THR3 1501 aa13.07□□□□□ -0.32
UBASH3B-205ENST00000529998 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
UBASH3B-205ENST00000529998 NUP155O75694 1391 aa13.07□□□□□ -0.32
UBASH3B-205ENST00000529998 TNRQ92752 1358 aa13.07□□□□□ -0.32
UBASH3B-205ENST00000529998 ERVK-7P63135 1459 aa13.06□□□□□ -0.32
UBASH3B-205ENST00000529998 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
UBASH3B-205ENST00000529998 E9PCH4 1651 aa13.05□□□□□ -0.32
UBASH3B-205ENST00000529998 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
UBASH3B-205ENST00000529998 STRCQ7RTU9 1775 aa13.02□□□□□ -0.32
UBASH3B-205ENST00000529998 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
UBASH3B-205ENST00000529998 A2ML1A8K2U0 1454 aa13.02□□□□□ -0.33
UBASH3B-205ENST00000529998 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
UBASH3B-205ENST00000529998 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
UBASH3B-205ENST00000529998 RPRD2Q5VT52 1461 aaKnown RBP13.01□□□□□ -0.33
UBASH3B-205ENST00000529998 NLRP1Q9C000 1473 aa13.01□□□□□ -0.33
UBASH3B-205ENST00000529998 SYNMO15061 1565 aa13.01□□□□□ -0.33
UBASH3B-205ENST00000529998 NOS1P29475 1434 aa13□□□□□ -0.33
UBASH3B-205ENST00000529998 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
UBASH3B-205ENST00000529998 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
UBASH3B-205ENST00000529998 PIK3C2BO00750 1634 aa12.98□□□□□ -0.33
UBASH3B-205ENST00000529998 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
UBASH3B-205ENST00000529998 IDI1Q13907 227 aa12.97□□□□□ -0.33
UBASH3B-205ENST00000529998 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.34
UBASH3B-205ENST00000529998 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
UBASH3B-205ENST00000529998 NCKAP5LQ9HCH0 1330 aa12.95□□□□□ -0.34
UBASH3B-205ENST00000529998 PKD2Q13563 968 aa12.95□□□□□ -0.34
UBASH3B-205ENST00000529998 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
UBASH3B-205ENST00000529998 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
UBASH3B-205ENST00000529998 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
UBASH3B-205ENST00000529998 SLC52A1Q9NWF4 448 aa12.94□□□□□ -0.34
UBASH3B-205ENST00000529998 KDM5AP29375 1690 aaKnown RBP12.93□□□□□ -0.34
UBASH3B-205ENST00000529998 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
UBASH3B-205ENST00000529998 PTPRTO14522 1441 aa12.93□□□□□ -0.34
UBASH3B-205ENST00000529998 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
UBASH3B-205ENST00000529998 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
UBASH3B-205ENST00000529998 ADGRB3O60242 1522 aa12.91□□□□□ -0.34
UBASH3B-205ENST00000529998 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
UBASH3B-205ENST00000529998 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
UBASH3B-205ENST00000529998 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
UBASH3B-205ENST00000529998 HRCP23327 699 aa12.9□□□□□ -0.34
UBASH3B-205ENST00000529998 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
UBASH3B-205ENST00000529998 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
UBASH3B-205ENST00000529998 SLIT1O75093 1534 aa12.89□□□□□ -0.35
UBASH3B-205ENST00000529998 TRPM2O94759 1503 aa12.89□□□□□ -0.35
UBASH3B-205ENST00000529998 CLTCL1P53675 1640 aa12.89□□□□□ -0.35
UBASH3B-205ENST00000529998 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
UBASH3B-205ENST00000529998 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
UBASH3B-205ENST00000529998 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
UBASH3B-205ENST00000529998 LTKP29376 864 aa12.88□□□□□ -0.35
UBASH3B-205ENST00000529998 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
UBASH3B-205ENST00000529998 KIF1BO60333 1816 aa12.87□□□□□ -0.35
UBASH3B-205ENST00000529998 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
UBASH3B-205ENST00000529998 MED14O60244 1454 aa12.85□□□□□ -0.35
UBASH3B-205ENST00000529998 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms