RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 CCNB3Q8WWL7 1395 aa23.76■■□□□ 1.39
AP002884.3-204ENST00000529938 PLEKHH2Q8IVE3 1493 aa23.75■■□□□ 1.39
AP002884.3-204ENST00000529938 ANKLE2Q86XL3 938 aa23.75■■□□□ 1.39
AP002884.3-204ENST00000529938 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
AP002884.3-204ENST00000529938 FBXO31Q5XUX0 539 aaPredicted RBP23.73■■□□□ 1.39
AP002884.3-204ENST00000529938 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
AP002884.3-204ENST00000529938 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
AP002884.3-204ENST00000529938 TNRQ92752 1358 aa23.72■■□□□ 1.39
AP002884.3-204ENST00000529938 VWDEQ8N2E2 1590 aa23.7■■□□□ 1.38
AP002884.3-204ENST00000529938 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
AP002884.3-204ENST00000529938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.69■■□□□ 1.38
AP002884.3-204ENST00000529938 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
AP002884.3-204ENST00000529938 ADGBQ8N7X0 1667 aa23.68■■□□□ 1.38
AP002884.3-204ENST00000529938 ZNF644Q9H582 1327 aaPredicted RBP23.67■■□□□ 1.38
AP002884.3-204ENST00000529938 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
AP002884.3-204ENST00000529938 DHX29Q7Z478 1369 aaKnown RBP23.65■■□□□ 1.38
AP002884.3-204ENST00000529938 RGS17Q9UGC6 210 aaPredicted RBP23.65■■□□□ 1.38
AP002884.3-204ENST00000529938 NPHP4O75161 1426 aaPredicted RBP23.65■■□□□ 1.38
AP002884.3-204ENST00000529938 MED14O60244 1454 aa23.64■■□□□ 1.38
AP002884.3-204ENST00000529938 PZPP20742 1482 aa23.63■■□□□ 1.37
AP002884.3-204ENST00000529938 TIAM1Q13009 1591 aa23.63■■□□□ 1.37
AP002884.3-204ENST00000529938 KIF3BO15066 747 aa23.62■■□□□ 1.37
AP002884.3-204ENST00000529938 RTEL1-TNFRSF6BF6WH68 1400 aa23.61■■□□□ 1.37
AP002884.3-204ENST00000529938 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
AP002884.3-204ENST00000529938 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
AP002884.3-204ENST00000529938 NCOA2Q15596 1464 aa23.61■■□□□ 1.37
AP002884.3-204ENST00000529938 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
AP002884.3-204ENST00000529938 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
AP002884.3-204ENST00000529938 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
AP002884.3-204ENST00000529938 MBD5Q9P267 1494 aa23.59■■□□□ 1.37
AP002884.3-204ENST00000529938 LRRC7Q96NW7 1537 aa23.59■■□□□ 1.37
AP002884.3-204ENST00000529938 UGGT1Q9NYU2 1555 aa23.58■■□□□ 1.37
AP002884.3-204ENST00000529938 FAM135AQ9P2D6 1515 aa23.58■■□□□ 1.36
AP002884.3-204ENST00000529938 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
AP002884.3-204ENST00000529938 KDM5DQ9BY66 1539 aa23.56■■□□□ 1.36
AP002884.3-204ENST00000529938 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
AP002884.3-204ENST00000529938 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
AP002884.3-204ENST00000529938 RNF17Q9BXT8 1623 aaKnown RBP23.51■■□□□ 1.35
AP002884.3-204ENST00000529938 APLP2Q06481 763 aa23.51■■□□□ 1.35
AP002884.3-204ENST00000529938 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
AP002884.3-204ENST00000529938 SYNMO15061 1565 aa23.48■■□□□ 1.35
AP002884.3-204ENST00000529938 POTEAQ6S8J7 498 aa23.47■■□□□ 1.35
AP002884.3-204ENST00000529938 CAMSAP2Q08AD1 1489 aa23.46■■□□□ 1.35
AP002884.3-204ENST00000529938 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
AP002884.3-204ENST00000529938 CCDC141Q6ZP82 1450 aa23.41■■□□□ 1.34
AP002884.3-204ENST00000529938 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.33
AP002884.3-204ENST00000529938 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
AP002884.3-204ENST00000529938 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
AP002884.3-204ENST00000529938 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
AP002884.3-204ENST00000529938 MYOM3Q5VTT5 1437 aa23.38■■□□□ 1.33
AP002884.3-204ENST00000529938 LTKP29376 864 aa23.36■■□□□ 1.33
AP002884.3-204ENST00000529938 SCAF11Q99590 1463 aaKnown RBP23.36■■□□□ 1.33
AP002884.3-204ENST00000529938 TXNDC2Q86VQ3 553 aa23.35■■□□□ 1.33
AP002884.3-204ENST00000529938 ERVK-7P63135 1459 aa23.35■■□□□ 1.33
AP002884.3-204ENST00000529938 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.32
AP002884.3-204ENST00000529938 ABCC3O15438 1527 aa23.33■■□□□ 1.32
AP002884.3-204ENST00000529938 ARHGEF5Q12774 1597 aa23.31■■□□□ 1.32
AP002884.3-204ENST00000529938 UBR1Q8IWV7 1749 aa23.3■■□□□ 1.32
AP002884.3-204ENST00000529938 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
AP002884.3-204ENST00000529938 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
AP002884.3-204ENST00000529938 SLIT1O75093 1534 aa23.27■■□□□ 1.32
AP002884.3-204ENST00000529938 CFAP65Q6ZU64 1925 aaKnown RBP23.25■■□□□ 1.31
AP002884.3-204ENST00000529938 TMEM94Q12767 1356 aa23.25■■□□□ 1.31
AP002884.3-204ENST00000529938 KCNA6P17658 529 aa23.21■■□□□ 1.31
AP002884.3-204ENST00000529938 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
AP002884.3-204ENST00000529938 ROBO1Q9Y6N7 1651 aa23.21■■□□□ 1.31
AP002884.3-204ENST00000529938 SETD1AO15047 1707 aaKnown RBP23.21■■□□□ 1.31
AP002884.3-204ENST00000529938 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
AP002884.3-204ENST00000529938 ABCC5O15440 1437 aa23.19■■□□□ 1.3
AP002884.3-204ENST00000529938 PROSER2Q86WR7 435 aaPredicted RBP23.19■■□□□ 1.3
AP002884.3-204ENST00000529938 MROH1Q8NDA8 1641 aa23.19■■□□□ 1.3
AP002884.3-204ENST00000529938 MAST1Q9Y2H9 1570 aa23.18■■□□□ 1.3
AP002884.3-204ENST00000529938 TMEM2Q9UHN6 1383 aa23.17■■□□□ 1.3
AP002884.3-204ENST00000529938 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.3
AP002884.3-204ENST00000529938 RBM33Q96EV2 1170 aaKnown RBP23.17■■□□□ 1.3
AP002884.3-204ENST00000529938 EIF2AK4Q9P2K8 1649 aaKnown RBP23.17■■□□□ 1.3
AP002884.3-204ENST00000529938 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
AP002884.3-204ENST00000529938 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
AP002884.3-204ENST00000529938 CEP152O94986 1710 aa23.16■■□□□ 1.3
AP002884.3-204ENST00000529938 ARHGAP31Q2M1Z3 1444 aa23.15■■□□□ 1.3
AP002884.3-204ENST00000529938 JCADQ9P266 1359 aa23.14■■□□□ 1.3
AP002884.3-204ENST00000529938 FAM50AQ14320 339 aaKnown RBP23.14■■□□□ 1.29
AP002884.3-204ENST00000529938 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
AP002884.3-204ENST00000529938 DAPK1P53355 1430 aa23.14■■□□□ 1.29
AP002884.3-204ENST00000529938 STAG3Q9UJ98 1225 aa23.13■■□□□ 1.29
AP002884.3-204ENST00000529938 SLC26A8Q96RN1 970 aa23.12■■□□□ 1.29
AP002884.3-204ENST00000529938 SLAIN2Q9P270 581 aa23.12■■□□□ 1.29
AP002884.3-204ENST00000529938 KIF15Q9NS87 1388 aa23.11■■□□□ 1.29
AP002884.3-204ENST00000529938 PRDM15P57071 1507 aaPredicted RBP23.09■■□□□ 1.29
AP002884.3-204ENST00000529938 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
AP002884.3-204ENST00000529938 MSH6P52701 1360 aa23.09■■□□□ 1.29
AP002884.3-204ENST00000529938 TET3O43151 1660 aa23.08■■□□□ 1.29
AP002884.3-204ENST00000529938 PHLPP1O60346 1717 aa23.08■■□□□ 1.28
AP002884.3-204ENST00000529938 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.28
AP002884.3-204ENST00000529938 IDI1Q13907 227 aa23.07■■□□□ 1.28
AP002884.3-204ENST00000529938 ZNF772Q68DY9 489 aaPredicted RBP23.07■■□□□ 1.28
AP002884.3-204ENST00000529938 TRIM52Q96A61 297 aa23.06■■□□□ 1.28
AP002884.3-204ENST00000529938 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
AP002884.3-204ENST00000529938 EFCAB6Q5THR3 1501 aa23.04■■□□□ 1.28
AP002884.3-204ENST00000529938 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms