RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 KDM5DQ9BY66 1539 aa26.36■■□□□ 1.81
CLP1-204ENST00000529773 UNC13BO14795 1591 aa26.36■■□□□ 1.81
CLP1-204ENST00000529773 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
CLP1-204ENST00000529773 VWDEQ8N2E2 1590 aa26.34■■□□□ 1.81
CLP1-204ENST00000529773 KIF3BO15066 747 aa26.34■■□□□ 1.81
CLP1-204ENST00000529773 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
CLP1-204ENST00000529773 ZC3H13Q5T200 1668 aaKnown RBP26.33■■□□□ 1.81
CLP1-204ENST00000529773 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
CLP1-204ENST00000529773 MROH2AA6NES4 1674 aa26.31■■□□□ 1.8
CLP1-204ENST00000529773 KDM4FA0A1W2PPD8 638 aa26.3■■□□□ 1.8
CLP1-204ENST00000529773 ABCC3O15438 1527 aa26.28■■□□□ 1.8
CLP1-204ENST00000529773 LMTK2Q8IWU2 1503 aa26.27■■□□□ 1.8
CLP1-204ENST00000529773 RIMS1Q86UR5 1692 aaKnown RBP26.27■■□□□ 1.8
CLP1-204ENST00000529773 TRIM26Q12899 539 aaPredicted RBP26.26■■□□□ 1.79
CLP1-204ENST00000529773 MLECQ14165 292 aa26.26■■□□□ 1.79
CLP1-204ENST00000529773 GGT6Q6P531 493 aa26.25■■□□□ 1.79
CLP1-204ENST00000529773 CLTCQ00610 1675 aaKnown RBP26.25■■□□□ 1.79
CLP1-204ENST00000529773 SETD5Q9C0A6 1442 aa26.23■■□□□ 1.79
CLP1-204ENST00000529773 IQGAP3Q86VI3 1631 aa26.23■■□□□ 1.79
CLP1-204ENST00000529773 PTPRMP28827 1452 aa26.22■■□□□ 1.79
CLP1-204ENST00000529773 CEP152O94986 1710 aa26.21■■□□□ 1.79
CLP1-204ENST00000529773 CAMSAP1Q5T5Y3 1602 aa26.19■■□□□ 1.78
CLP1-204ENST00000529773 KANK1Q14678 1352 aa26.19■■□□□ 1.78
CLP1-204ENST00000529773 C3P01024 1663 aa26.18■■□□□ 1.78
CLP1-204ENST00000529773 EFCAB6Q5THR3 1501 aa26.17■■□□□ 1.78
CLP1-204ENST00000529773 TET3O43151 1660 aa26.16■■□□□ 1.78
CLP1-204ENST00000529773 ARHGAP31Q2M1Z3 1444 aa26.16■■□□□ 1.78
CLP1-204ENST00000529773 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
CLP1-204ENST00000529773 WASHC2CQ9Y4E1 1318 aa26.15■■□□□ 1.78
CLP1-204ENST00000529773 RAB3GAP2Q9H2M9 1393 aa26.15■■□□□ 1.78
CLP1-204ENST00000529773 PZPP20742 1482 aa26.15■■□□□ 1.78
CLP1-204ENST00000529773 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
CLP1-204ENST00000529773 HRCP23327 699 aa26.12■■□□□ 1.77
CLP1-204ENST00000529773 ESF1Q9H501 851 aaKnown RBP26.12■■□□□ 1.77
CLP1-204ENST00000529773 NUP155O75694 1391 aa26.11■■□□□ 1.77
CLP1-204ENST00000529773 NPATQ14207 1427 aa26.1■■□□□ 1.77
CLP1-204ENST00000529773 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
CLP1-204ENST00000529773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.09■■□□□ 1.77
CLP1-204ENST00000529773 SPATA31D1Q6ZQQ2 1576 aa26.07■■□□□ 1.76
CLP1-204ENST00000529773 E9PCH4 1651 aa26.04■■□□□ 1.76
CLP1-204ENST00000529773 PREX1Q8TCU6 1659 aa26.03■■□□□ 1.76
CLP1-204ENST00000529773 ERVK-7P63135 1459 aa26.03■■□□□ 1.76
CLP1-204ENST00000529773 NOS1P29475 1434 aa25.99■■□□□ 1.75
CLP1-204ENST00000529773 CEBPAP49715 358 aaPredicted RBP25.99■■□□□ 1.75
CLP1-204ENST00000529773 MYO3AQ8NEV4 1616 aa25.96■■□□□ 1.75
CLP1-204ENST00000529773 TRIM52Q96A61 297 aa25.95■■□□□ 1.74
CLP1-204ENST00000529773 SYNMO15061 1565 aa25.95■■□□□ 1.74
CLP1-204ENST00000529773 SETD1BQ9UPS6 1966 aaKnown RBP25.94■■□□□ 1.74
CLP1-204ENST00000529773 PTPRTO14522 1441 aa25.93■■□□□ 1.74
CLP1-204ENST00000529773 TNRQ92752 1358 aa25.93■■□□□ 1.74
CLP1-204ENST00000529773 ZNF142P52746 1687 aaPredicted RBP25.93■■□□□ 1.74
CLP1-204ENST00000529773 FBXO31Q5XUX0 539 aaPredicted RBP25.92■■□□□ 1.74
CLP1-204ENST00000529773 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
CLP1-204ENST00000529773 NLRP1Q9C000 1473 aa25.91■■□□□ 1.74
CLP1-204ENST00000529773 PIK3C2BO00750 1634 aa25.9■■□□□ 1.74
CLP1-204ENST00000529773 SLC4A1APQ9BWU0 796 aaKnown RBP25.9■■□□□ 1.74
CLP1-204ENST00000529773 TRPM2O94759 1503 aa25.89■■□□□ 1.74
CLP1-204ENST00000529773 MPHOSPH9Q99550 1183 aa25.89■■□□□ 1.74
CLP1-204ENST00000529773 UHRF1BP1Q6BDS2 1440 aa25.87■■□□□ 1.73
CLP1-204ENST00000529773 CEP170BQ9Y4F5 1589 aaPredicted RBP25.86■■□□□ 1.73
CLP1-204ENST00000529773 LMTK3Q96Q04 1460 aa25.86■■□□□ 1.73
CLP1-204ENST00000529773 PKD2Q13563 968 aa25.86■■□□□ 1.73
CLP1-204ENST00000529773 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
CLP1-204ENST00000529773 PLA2R1Q13018 1463 aa25.85■■□□□ 1.73
CLP1-204ENST00000529773 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
CLP1-204ENST00000529773 KDM5AP29375 1690 aaKnown RBP25.84■■□□□ 1.73
CLP1-204ENST00000529773 CFAP65Q6ZU64 1925 aaKnown RBP25.83■■□□□ 1.73
CLP1-204ENST00000529773 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
CLP1-204ENST00000529773 UGGT1Q9NYU2 1555 aa25.79■■□□□ 1.72
CLP1-204ENST00000529773 SLC52A1Q9NWF4 448 aa25.79■■□□□ 1.72
CLP1-204ENST00000529773 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
CLP1-204ENST00000529773 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
CLP1-204ENST00000529773 CLTCL1P53675 1640 aa25.77■■□□□ 1.72
CLP1-204ENST00000529773 UBR1Q8IWV7 1749 aa25.77■■□□□ 1.72
CLP1-204ENST00000529773 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
CLP1-204ENST00000529773 TMEM131LA2VDJ0 1609 aa25.74■■□□□ 1.71
CLP1-204ENST00000529773 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
CLP1-204ENST00000529773 IDI1Q13907 227 aa25.73■■□□□ 1.71
CLP1-204ENST00000529773 FOXD1Q16676 465 aa25.72■■□□□ 1.71
CLP1-204ENST00000529773 NEURL4Q96JN8 1562 aa25.71■■□□□ 1.71
CLP1-204ENST00000529773 ARHGAP23Q9P227 1491 aa25.68■■□□□ 1.7
CLP1-204ENST00000529773 CCDC144AA2RUR9 1427 aa25.68■■□□□ 1.7
CLP1-204ENST00000529773 SLIT1O75093 1534 aa25.68■■□□□ 1.7
CLP1-204ENST00000529773 KIF1BO60333 1816 aa25.65■■□□□ 1.7
CLP1-204ENST00000529773 MYO5BQ9ULV0 1848 aa25.63■■□□□ 1.69
CLP1-204ENST00000529773 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
CLP1-204ENST00000529773 THEMISQ8N1K5 641 aaPredicted RBP25.61■■□□□ 1.69
CLP1-204ENST00000529773 TMEM2Q9UHN6 1383 aa25.6■■□□□ 1.69
CLP1-204ENST00000529773 ZFYVE9O95405 1425 aa25.6■■□□□ 1.69
CLP1-204ENST00000529773 POLR1AO95602 1720 aaPredicted RBP25.57■■□□□ 1.68
CLP1-204ENST00000529773 STRCQ7RTU9 1775 aa25.57■■□□□ 1.68
CLP1-204ENST00000529773 HSPA2P54652 639 aa25.57■■□□□ 1.68
CLP1-204ENST00000529773 NEXMIFQ5QGS0 1516 aa25.55■■□□□ 1.68
CLP1-204ENST00000529773 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
CLP1-204ENST00000529773 MED14O60244 1454 aa25.53■■□□□ 1.68
CLP1-204ENST00000529773 SCAF11Q99590 1463 aaKnown RBP25.53■■□□□ 1.68
CLP1-204ENST00000529773 RIMS2Q9UQ26 1411 aa25.52■■□□□ 1.68
CLP1-204ENST00000529773 IFT172Q9UG01 1749 aa25.51■■□□□ 1.68
CLP1-204ENST00000529773 PPLO60437 1756 aa25.49■■□□□ 1.67
CLP1-204ENST00000529773 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms