RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ESF1Q9H501 851 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-208ENST00000529608 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-208ENST00000529608 ZMYM3Q14202 1370 aa13.96□□□□□ -0.17
TGFBR3-208ENST00000529608 NPATQ14207 1427 aa13.96□□□□□ -0.18
TGFBR3-208ENST00000529608 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.18
TGFBR3-208ENST00000529608 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
TGFBR3-208ENST00000529608 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
TGFBR3-208ENST00000529608 A2MP01023 1474 aa13.93□□□□□ -0.18
TGFBR3-208ENST00000529608 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
TGFBR3-208ENST00000529608 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
TGFBR3-208ENST00000529608 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
TGFBR3-208ENST00000529608 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
TGFBR3-208ENST00000529608 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
TGFBR3-208ENST00000529608 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
TGFBR3-208ENST00000529608 ZNF335Q9H4Z2 1342 aaPredicted RBP13.91□□□□□ -0.18
TGFBR3-208ENST00000529608 ZNF644Q9H582 1327 aaPredicted RBP13.91□□□□□ -0.18
TGFBR3-208ENST00000529608 TCOF1Q13428 1488 aaKnown RBP13.9□□□□□ -0.18
TGFBR3-208ENST00000529608 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
TGFBR3-208ENST00000529608 SOCS7O14512 581 aa13.89□□□□□ -0.19
TGFBR3-208ENST00000529608 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
TGFBR3-208ENST00000529608 CFDP1Q9UEE9 299 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-208ENST00000529608 PLA2R1Q13018 1463 aa13.88□□□□□ -0.19
TGFBR3-208ENST00000529608 PLEKHH2Q8IVE3 1493 aa13.88□□□□□ -0.19
TGFBR3-208ENST00000529608 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
TGFBR3-208ENST00000529608 GGT6Q6P531 493 aa13.88□□□□□ -0.19
TGFBR3-208ENST00000529608 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-208ENST00000529608 ABCB7O75027 752 aa13.86□□□□□ -0.19
TGFBR3-208ENST00000529608 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
TGFBR3-208ENST00000529608 MTUS2Q5JR59 1369 aa13.84□□□□□ -0.19
TGFBR3-208ENST00000529608 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
TGFBR3-208ENST00000529608 NEURL4Q96JN8 1562 aa13.84□□□□□ -0.19
TGFBR3-208ENST00000529608 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
TGFBR3-208ENST00000529608 PKD2Q13563 968 aa13.82□□□□□ -0.2
TGFBR3-208ENST00000529608 UBAP1LF5GYI3 381 aa13.81□□□□□ -0.2
TGFBR3-208ENST00000529608 FBXO31Q5XUX0 539 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-208ENST00000529608 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-208ENST00000529608 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
TGFBR3-208ENST00000529608 CEP162Q5TB80 1403 aa13.8□□□□□ -0.2
TGFBR3-208ENST00000529608 CAMSAP2Q08AD1 1489 aa13.79□□□□□ -0.2
TGFBR3-208ENST00000529608 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
TGFBR3-208ENST00000529608 KDM5DQ9BY66 1539 aa13.78□□□□□ -0.2
TGFBR3-208ENST00000529608 PZPP20742 1482 aa13.77□□□□□ -0.21
TGFBR3-208ENST00000529608 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
TGFBR3-208ENST00000529608 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
TGFBR3-208ENST00000529608 VWDEQ8N2E2 1590 aa13.76□□□□□ -0.21
TGFBR3-208ENST00000529608 TNRQ92752 1358 aa13.76□□□□□ -0.21
TGFBR3-208ENST00000529608 KIF3BO15066 747 aa13.76□□□□□ -0.21
TGFBR3-208ENST00000529608 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
TGFBR3-208ENST00000529608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
TGFBR3-208ENST00000529608 POLA2Q14181 598 aa13.74□□□□□ -0.21
TGFBR3-208ENST00000529608 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
TGFBR3-208ENST00000529608 HSPA1LP34931 641 aa13.73□□□□□ -0.21
TGFBR3-208ENST00000529608 ARHGEF5Q12774 1597 aa13.73□□□□□ -0.21
TGFBR3-208ENST00000529608 CPS1P31327 1500 aa13.73□□□□□ -0.21
TGFBR3-208ENST00000529608 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-208ENST00000529608 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
TGFBR3-208ENST00000529608 RNF17Q9BXT8 1623 aaKnown RBP13.72□□□□□ -0.21
TGFBR3-208ENST00000529608 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.21
TGFBR3-208ENST00000529608 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
TGFBR3-208ENST00000529608 MIA2Q96PC5 1412 aa13.71□□□□□ -0.22
TGFBR3-208ENST00000529608 DEPDC5O75140 1603 aa13.71□□□□□ -0.22
TGFBR3-208ENST00000529608 MROH1Q8NDA8 1641 aa13.71□□□□□ -0.22
TGFBR3-208ENST00000529608 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
TGFBR3-208ENST00000529608 IQGAP1P46940 1657 aa13.7□□□□□ -0.22
TGFBR3-208ENST00000529608 MED14O60244 1454 aa13.7□□□□□ -0.22
TGFBR3-208ENST00000529608 CEP152O94986 1710 aa13.7□□□□□ -0.22
TGFBR3-208ENST00000529608 ABCC3O15438 1527 aa13.69□□□□□ -0.22
TGFBR3-208ENST00000529608 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
TGFBR3-208ENST00000529608 MAST1Q9Y2H9 1570 aa13.68□□□□□ -0.22
TGFBR3-208ENST00000529608 NPHP4O75161 1426 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-208ENST00000529608 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-208ENST00000529608 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-208ENST00000529608 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
TGFBR3-208ENST00000529608 EIF2AK4Q9P2K8 1649 aaKnown RBP13.66□□□□□ -0.22
TGFBR3-208ENST00000529608 ANKLE2Q86XL3 938 aa13.66□□□□□ -0.22
TGFBR3-208ENST00000529608 RSPH4AQ5TD94 716 aa13.65□□□□□ -0.22
TGFBR3-208ENST00000529608 THEMISQ8N1K5 641 aaPredicted RBP13.65□□□□□ -0.22
TGFBR3-208ENST00000529608 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
TGFBR3-208ENST00000529608 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
TGFBR3-208ENST00000529608 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
TGFBR3-208ENST00000529608 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-208ENST00000529608 TOM1O60784 492 aa13.64□□□□□ -0.23
TGFBR3-208ENST00000529608 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
TGFBR3-208ENST00000529608 TSPY4P0CV99 314 aa13.62□□□□□ -0.23
TGFBR3-208ENST00000529608 TSPY10P0CW01 314 aa13.62□□□□□ -0.23
TGFBR3-208ENST00000529608 SYNMO15061 1565 aa13.61□□□□□ -0.23
TGFBR3-208ENST00000529608 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
TGFBR3-208ENST00000529608 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
TGFBR3-208ENST00000529608 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.24
TGFBR3-208ENST00000529608 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
TGFBR3-208ENST00000529608 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
TGFBR3-208ENST00000529608 LOC105371045A0A1W2PR82 267 aa13.57□□□□□ -0.24
TGFBR3-208ENST00000529608 LTKP29376 864 aa13.57□□□□□ -0.24
TGFBR3-208ENST00000529608 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
TGFBR3-208ENST00000529608 DUOX2Q9NRD8 1548 aa13.57□□□□□ -0.24
TGFBR3-208ENST00000529608 SCAF11Q99590 1463 aaKnown RBP13.56□□□□□ -0.24
TGFBR3-208ENST00000529608 SLIT1O75093 1534 aa13.56□□□□□ -0.24
TGFBR3-208ENST00000529608 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
TGFBR3-208ENST00000529608 ABCC5O15440 1437 aa13.54□□□□□ -0.24
TGFBR3-208ENST00000529608 ARHGAP31Q2M1Z3 1444 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms