RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 PLIN1O60240 522 aa10.17□□□□□ -0.78
CTNND1-220ENST00000529526 PANK3Q9H999 370 aa10.17□□□□□ -0.78
CTNND1-220ENST00000529526 GPATCH3Q96I76 525 aa10.17□□□□□ -0.78
CTNND1-220ENST00000529526 IPO9Q96P70 1041 aaKnown RBP10.17□□□□□ -0.78
CTNND1-220ENST00000529526 BCL2L13Q9BXK5 485 aa10.17□□□□□ -0.78
CTNND1-220ENST00000529526 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
CTNND1-220ENST00000529526 ST20-MTHFSA0A0A6YYL1 179 aa10.16□□□□□ -0.78
CTNND1-220ENST00000529526 PTMSP20962 102 aa10.16□□□□□ -0.78
CTNND1-220ENST00000529526 KIF15Q9NS87 1388 aa10.16□□□□□ -0.78
CTNND1-220ENST00000529526 ELL2O00472 640 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-220ENST00000529526 HMMRO75330 724 aa10.16□□□□□ -0.78
CTNND1-220ENST00000529526 EID1Q9Y6B2 187 aa10.15□□□□□ -0.78
CTNND1-220ENST00000529526 KIAA2012Q0VF49 1180 aa10.15□□□□□ -0.78
CTNND1-220ENST00000529526 GOLGA6L3A6NEY3 463 aa10.15□□□□□ -0.78
CTNND1-220ENST00000529526 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.79
CTNND1-220ENST00000529526 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-220ENST00000529526 SYAP1Q96A49 352 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-220ENST00000529526 HTATSF1O43719 755 aaKnown RBP10.13□□□□□ -0.79
CTNND1-220ENST00000529526 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
CTNND1-220ENST00000529526 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
CTNND1-220ENST00000529526 CREBRFQ8IUR6 639 aa10.13□□□□□ -0.79
CTNND1-220ENST00000529526 CCDC144AA2RUR9 1427 aa10.13□□□□□ -0.79
CTNND1-220ENST00000529526 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
CTNND1-220ENST00000529526 LMOD3Q0VAK6 560 aa10.12□□□□□ -0.79
CTNND1-220ENST00000529526 PDE3BQ13370 1112 aa10.12□□□□□ -0.79
CTNND1-220ENST00000529526 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
CTNND1-220ENST00000529526 EXOC6Q8TAG9 804 aa10.11□□□□□ -0.79
CTNND1-220ENST00000529526 RILPL2Q969X0 211 aa10.11□□□□□ -0.79
CTNND1-220ENST00000529526 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
CTNND1-220ENST00000529526 CRBNQ96SW2 442 aa10.11□□□□□ -0.79
CTNND1-220ENST00000529526 TPM4P67936 248 aa10.11□□□□□ -0.79
CTNND1-220ENST00000529526 ANKRD45Q5TZF3 282 aa10.11□□□□□ -0.79
CTNND1-220ENST00000529526 TMX4Q9H1E5 349 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-220ENST00000529526 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
CTNND1-220ENST00000529526 PDE4CQ08493 712 aa10.1□□□□□ -0.79
CTNND1-220ENST00000529526 FOXD4L6Q3SYB3 417 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-220ENST00000529526 FOXD4L3Q6VB84 417 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-220ENST00000529526 RASSF8Q8NHQ8 419 aa10.1□□□□□ -0.79
CTNND1-220ENST00000529526 CADPSQ9ULU8 1353 aa10.1□□□□□ -0.79
CTNND1-220ENST00000529526 RSPH4AQ5TD94 716 aa10.09□□□□□ -0.79
CTNND1-220ENST00000529526 NOC3LQ8WTT2 800 aaKnown RBP10.09□□□□□ -0.79
CTNND1-220ENST00000529526 MINK1Q8N4C8 1332 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-220ENST00000529526 ST18O60284 1047 aa10.09□□□□□ -0.79
CTNND1-220ENST00000529526 G3V3G9 751 aa10.09□□□□□ -0.79
CTNND1-220ENST00000529526 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
CTNND1-220ENST00000529526 CHMP4AQ9BY43 222 aa10.09□□□□□ -0.79
CTNND1-220ENST00000529526 KIF16BQ96L93 1317 aa10.08□□□□□ -0.8
CTNND1-220ENST00000529526 USP47Q96K76 1375 aa10.08□□□□□ -0.8
CTNND1-220ENST00000529526 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-220ENST00000529526 RRP1P56182 461 aaKnown RBP10.08□□□□□ -0.8
CTNND1-220ENST00000529526 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
CTNND1-220ENST00000529526 NGEFQ8N5V2 710 aa10.08□□□□□ -0.8
CTNND1-220ENST00000529526 COG3Q96JB2 828 aa10.08□□□□□ -0.8
CTNND1-220ENST00000529526 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
CTNND1-220ENST00000529526 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-220ENST00000529526 PRKRIP1Q9H875 184 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-220ENST00000529526 HDAC5Q9UQL6 1122 aa10.07□□□□□ -0.8
CTNND1-220ENST00000529526 CSPP1Q1MSJ5 1256 aa10.07□□□□□ -0.8
CTNND1-220ENST00000529526 PDE4AP27815 886 aa10.07□□□□□ -0.8
CTNND1-220ENST00000529526 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
CTNND1-220ENST00000529526 GTF2E1P29083 439 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-220ENST00000529526 ZKSCAN2Q63HK3 967 aa10.06□□□□□ -0.8
CTNND1-220ENST00000529526 EVC2Q86UK5 1308 aa10.06□□□□□ -0.8
CTNND1-220ENST00000529526 E9PSI1 815 aa10.06□□□□□ -0.8
CTNND1-220ENST00000529526 APAF1O14727 1248 aa10.06□□□□□ -0.8
CTNND1-220ENST00000529526 EIF2S2P20042 333 aaKnown RBP10.06□□□□□ -0.8
CTNND1-220ENST00000529526 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
CTNND1-220ENST00000529526 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
CTNND1-220ENST00000529526 H3BQV1 296 aa10.05□□□□□ -0.8
CTNND1-220ENST00000529526 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
CTNND1-220ENST00000529526 VPS53Q5VIR6 699 aa10.05□□□□□ -0.8
CTNND1-220ENST00000529526 SF3A1Q15459 793 aaKnown RBP10.05□□□□□ -0.8
CTNND1-220ENST00000529526 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-220ENST00000529526 UACAQ9BZF9 1416 aa10.04□□□□□ -0.8
CTNND1-220ENST00000529526 ZBED9Q6R2W3 1325 aa10.03□□□□□ -0.8
CTNND1-220ENST00000529526 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
CTNND1-220ENST00000529526 VGFO15240 615 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-220ENST00000529526 PHF14O94880 888 aa10.03□□□□□ -0.8
CTNND1-220ENST00000529526 CCDC34Q96HJ3 373 aa10.03□□□□□ -0.8
CTNND1-220ENST00000529526 EVA1CP58658 441 aa10.02□□□□□ -0.8
CTNND1-220ENST00000529526 FANCD2Q9BXW9 1451 aa10.02□□□□□ -0.8
CTNND1-220ENST00000529526 MARCH6O60337 910 aa10.02□□□□□ -0.81
CTNND1-220ENST00000529526 PES1O00541 588 aaKnown RBP10.02□□□□□ -0.81
CTNND1-220ENST00000529526 FAM184AQ8NB25 1140 aa10.02□□□□□ -0.81
CTNND1-220ENST00000529526 ATAD2BQ9ULI0 1458 aa10.02□□□□□ -0.81
CTNND1-220ENST00000529526 PTPRGP23470 1445 aa10.02□□□□□ -0.81
CTNND1-220ENST00000529526 DDX49Q9Y6V7 483 aaKnown RBP10.02□□□□□ -0.81
CTNND1-220ENST00000529526 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
CTNND1-220ENST00000529526 RIPK4P57078 832 aa10.01□□□□□ -0.81
CTNND1-220ENST00000529526 TEFQ10587 303 aa10.01□□□□□ -0.81
CTNND1-220ENST00000529526 DIAPH1O60610 1272 aaKnown RBP10.01□□□□□ -0.81
CTNND1-220ENST00000529526 MCTP1Q6DN14 999 aa10.01□□□□□ -0.81
CTNND1-220ENST00000529526 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-220ENST00000529526 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
CTNND1-220ENST00000529526 C9orf78Q9NZ63 289 aaPredicted RBP10□□□□□ -0.81
CTNND1-220ENST00000529526 A0A0U1RQG5 324 aaPredicted RBP10□□□□□ -0.81
CTNND1-220ENST00000529526 TTC5Q8N0Z6 440 aa10□□□□□ -0.81
CTNND1-220ENST00000529526 ZNF644Q9H582 1327 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-220ENST00000529526 CYB5RLQ6IPT4 315 aa9.99□□□□□ -0.81
CTNND1-220ENST00000529526 ANO2Q9NQ90 1003 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms