RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
PABPC4-223ENST00000529216 UNC13BO14795 1591 aa12.2□□□□□ -0.46
PABPC4-223ENST00000529216 KDM5DQ9BY66 1539 aa12.19□□□□□ -0.46
PABPC4-223ENST00000529216 DEPDC5O75140 1603 aa12.19□□□□□ -0.46
PABPC4-223ENST00000529216 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
PABPC4-223ENST00000529216 PRDM15P57071 1507 aaPredicted RBP12.18□□□□□ -0.46
PABPC4-223ENST00000529216 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
PABPC4-223ENST00000529216 KIF3BO15066 747 aa12.16□□□□□ -0.46
PABPC4-223ENST00000529216 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
PABPC4-223ENST00000529216 VWDEQ8N2E2 1590 aa12.14□□□□□ -0.47
PABPC4-223ENST00000529216 NUP155O75694 1391 aa12.14□□□□□ -0.47
PABPC4-223ENST00000529216 KANK1Q14678 1352 aa12.14□□□□□ -0.47
PABPC4-223ENST00000529216 SIGLEC1Q9BZZ2 1709 aa12.14□□□□□ -0.47
PABPC4-223ENST00000529216 PZPP20742 1482 aa12.14□□□□□ -0.47
PABPC4-223ENST00000529216 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
PABPC4-223ENST00000529216 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
PABPC4-223ENST00000529216 LMTK2Q8IWU2 1503 aa12.12□□□□□ -0.47
PABPC4-223ENST00000529216 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
PABPC4-223ENST00000529216 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
PABPC4-223ENST00000529216 GGT6Q6P531 493 aa12.1□□□□□ -0.47
PABPC4-223ENST00000529216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
PABPC4-223ENST00000529216 ABCC3O15438 1527 aa12.1□□□□□ -0.47
PABPC4-223ENST00000529216 ZC3H13Q5T200 1668 aaKnown RBP12.1□□□□□ -0.47
PABPC4-223ENST00000529216 MPHOSPH9Q99550 1183 aa12.09□□□□□ -0.47
PABPC4-223ENST00000529216 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
PABPC4-223ENST00000529216 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
PABPC4-223ENST00000529216 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
PABPC4-223ENST00000529216 TET3O43151 1660 aa12.07□□□□□ -0.48
PABPC4-223ENST00000529216 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
PABPC4-223ENST00000529216 ARHGAP31Q2M1Z3 1444 aa12.06□□□□□ -0.48
PABPC4-223ENST00000529216 CNTLNQ9NXG0 1405 aa12.06□□□□□ -0.48
PABPC4-223ENST00000529216 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
PABPC4-223ENST00000529216 CLSPNQ9HAW4 1339 aa12.06□□□□□ -0.48
PABPC4-223ENST00000529216 PKD2Q13563 968 aa12.05□□□□□ -0.48
PABPC4-223ENST00000529216 MLECQ14165 292 aa12.04□□□□□ -0.48
PABPC4-223ENST00000529216 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-223ENST00000529216 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
PABPC4-223ENST00000529216 NPATQ14207 1427 aa12.03□□□□□ -0.48
PABPC4-223ENST00000529216 CEP152O94986 1710 aa12.03□□□□□ -0.48
PABPC4-223ENST00000529216 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.49
PABPC4-223ENST00000529216 E9PCH4 1651 aa12.01□□□□□ -0.49
PABPC4-223ENST00000529216 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
PABPC4-223ENST00000529216 PTPRTO14522 1441 aa12.01□□□□□ -0.49
PABPC4-223ENST00000529216 MROH2AA6NES4 1674 aa12□□□□□ -0.49
PABPC4-223ENST00000529216 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
PABPC4-223ENST00000529216 TRPM2O94759 1503 aa12□□□□□ -0.49
PABPC4-223ENST00000529216 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
PABPC4-223ENST00000529216 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
PABPC4-223ENST00000529216 NOS1P29475 1434 aa11.99□□□□□ -0.49
PABPC4-223ENST00000529216 PLA2R1Q13018 1463 aa11.99□□□□□ -0.49
PABPC4-223ENST00000529216 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
PABPC4-223ENST00000529216 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
PABPC4-223ENST00000529216 SPATA31D1Q6ZQQ2 1576 aa11.97□□□□□ -0.49
PABPC4-223ENST00000529216 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
PABPC4-223ENST00000529216 CCDC144AA2RUR9 1427 aa11.96□□□□□ -0.49
PABPC4-223ENST00000529216 SPHKAPQ2M3C7 1700 aa11.95□□□□□ -0.5
PABPC4-223ENST00000529216 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
PABPC4-223ENST00000529216 SYNMO15061 1565 aa11.94□□□□□ -0.5
PABPC4-223ENST00000529216 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
PABPC4-223ENST00000529216 C3P01024 1663 aa11.92□□□□□ -0.5
PABPC4-223ENST00000529216 PTPRMP28827 1452 aa11.92□□□□□ -0.5
PABPC4-223ENST00000529216 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
PABPC4-223ENST00000529216 PIK3C2BO00750 1634 aa11.92□□□□□ -0.5
PABPC4-223ENST00000529216 CLTCL1P53675 1640 aa11.92□□□□□ -0.5
PABPC4-223ENST00000529216 TNRQ92752 1358 aa11.92□□□□□ -0.5
PABPC4-223ENST00000529216 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
PABPC4-223ENST00000529216 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
PABPC4-223ENST00000529216 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
PABPC4-223ENST00000529216 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
PABPC4-223ENST00000529216 NLRP1Q9C000 1473 aa11.89□□□□□ -0.51
PABPC4-223ENST00000529216 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
PABPC4-223ENST00000529216 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
PABPC4-223ENST00000529216 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
PABPC4-223ENST00000529216 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
PABPC4-223ENST00000529216 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
PABPC4-223ENST00000529216 TONSLQ96HA7 1378 aa11.88□□□□□ -0.51
PABPC4-223ENST00000529216 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
PABPC4-223ENST00000529216 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
PABPC4-223ENST00000529216 IDI1Q13907 227 aa11.86□□□□□ -0.51
PABPC4-223ENST00000529216 MYO3AQ8NEV4 1616 aa11.85□□□□□ -0.51
PABPC4-223ENST00000529216 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
PABPC4-223ENST00000529216 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
PABPC4-223ENST00000529216 TMEM131LA2VDJ0 1609 aa11.83□□□□□ -0.52
PABPC4-223ENST00000529216 PLPPR3Q6T4P5 718 aa11.82□□□□□ -0.52
PABPC4-223ENST00000529216 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
PABPC4-223ENST00000529216 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
PABPC4-223ENST00000529216 CEP170BQ9Y4F5 1589 aaPredicted RBP11.82□□□□□ -0.52
PABPC4-223ENST00000529216 RPGRIP1LQ68CZ1 1315 aa11.82□□□□□ -0.52
PABPC4-223ENST00000529216 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
PABPC4-223ENST00000529216 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
PABPC4-223ENST00000529216 MYOM2P54296 1465 aa11.81□□□□□ -0.52
PABPC4-223ENST00000529216 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
PABPC4-223ENST00000529216 RGL3Q3MIN7 710 aa11.8□□□□□ -0.52
PABPC4-223ENST00000529216 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
PABPC4-223ENST00000529216 KIF1BO60333 1816 aa11.8□□□□□ -0.52
PABPC4-223ENST00000529216 UBR1Q8IWV7 1749 aa11.79□□□□□ -0.52
PABPC4-223ENST00000529216 NEXMIFQ5QGS0 1516 aa11.79□□□□□ -0.52
PABPC4-223ENST00000529216 ZFYVE9O95405 1425 aa11.78□□□□□ -0.52
PABPC4-223ENST00000529216 SLIT1O75093 1534 aa11.78□□□□□ -0.52
PABPC4-223ENST00000529216 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms