RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
HIF3A-212ENST00000529205 TNRQ92752 1358 aa21.66■■□□□ 1.06
HIF3A-212ENST00000529205 WASHC2CQ9Y4E1 1318 aa21.66■■□□□ 1.06
HIF3A-212ENST00000529205 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
HIF3A-212ENST00000529205 CEP162Q5TB80 1403 aa21.64■■□□□ 1.06
HIF3A-212ENST00000529205 ANKLE2Q86XL3 938 aa21.64■■□□□ 1.05
HIF3A-212ENST00000529205 THEMISQ8N1K5 641 aaPredicted RBP21.64■■□□□ 1.05
HIF3A-212ENST00000529205 PIP4K2BP78356 416 aa21.63■■□□□ 1.05
HIF3A-212ENST00000529205 FBXO31Q5XUX0 539 aaPredicted RBP21.63■■□□□ 1.05
HIF3A-212ENST00000529205 CPS1P31327 1500 aa21.62■■□□□ 1.05
HIF3A-212ENST00000529205 KDM5DQ9BY66 1539 aa21.61■■□□□ 1.05
HIF3A-212ENST00000529205 FAM135AQ9P2D6 1515 aa21.61■■□□□ 1.05
HIF3A-212ENST00000529205 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
HIF3A-212ENST00000529205 PZPP20742 1482 aa21.6■■□□□ 1.05
HIF3A-212ENST00000529205 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
HIF3A-212ENST00000529205 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
HIF3A-212ENST00000529205 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
HIF3A-212ENST00000529205 HSPA1LP34931 641 aa21.58■■□□□ 1.05
HIF3A-212ENST00000529205 POLR1AO95602 1720 aaPredicted RBP21.58■■□□□ 1.04
HIF3A-212ENST00000529205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.04
HIF3A-212ENST00000529205 MIA2Q96PC5 1412 aa21.56■■□□□ 1.04
HIF3A-212ENST00000529205 NLRP1Q9C000 1473 aa21.56■■□□□ 1.04
HIF3A-212ENST00000529205 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
HIF3A-212ENST00000529205 NEURL4Q96JN8 1562 aa21.53■■□□□ 1.04
HIF3A-212ENST00000529205 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
HIF3A-212ENST00000529205 NCOA2Q15596 1464 aa21.53■■□□□ 1.04
HIF3A-212ENST00000529205 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
HIF3A-212ENST00000529205 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
HIF3A-212ENST00000529205 MED14O60244 1454 aa21.49■■□□□ 1.03
HIF3A-212ENST00000529205 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
HIF3A-212ENST00000529205 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
HIF3A-212ENST00000529205 DEPDC5O75140 1603 aa21.47■■□□□ 1.03
HIF3A-212ENST00000529205 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
HIF3A-212ENST00000529205 IQGAP1P46940 1657 aa21.41■■□□□ 1.02
HIF3A-212ENST00000529205 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
HIF3A-212ENST00000529205 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
HIF3A-212ENST00000529205 ABCC3O15438 1527 aa21.38■■□□□ 1.01
HIF3A-212ENST00000529205 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
HIF3A-212ENST00000529205 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
HIF3A-212ENST00000529205 LRRC7Q96NW7 1537 aa21.36■■□□□ 1.01
HIF3A-212ENST00000529205 ERVK-7P63135 1459 aa21.36■■□□□ 1.01
HIF3A-212ENST00000529205 EIF2AK4Q9P2K8 1649 aaKnown RBP21.36■■□□□ 1.01
HIF3A-212ENST00000529205 LRRC9Q6ZRR7 1453 aa21.35■■□□□ 1.01
HIF3A-212ENST00000529205 EID1Q9Y6B2 187 aa21.34■■□□□ 1.01
HIF3A-212ENST00000529205 SYNMO15061 1565 aa21.34■■□□□ 1.01
HIF3A-212ENST00000529205 TXNDC2Q86VQ3 553 aa21.33■■□□□ 1.01
HIF3A-212ENST00000529205 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
HIF3A-212ENST00000529205 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
HIF3A-212ENST00000529205 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
HIF3A-212ENST00000529205 ALKQ9UM73 1620 aa21.3■■□□□ 1
HIF3A-212ENST00000529205 DUOX2Q9NRD8 1548 aa21.29■■□□□ 1
HIF3A-212ENST00000529205 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
HIF3A-212ENST00000529205 UBR1Q8IWV7 1749 aa21.27■■□□□ 1
HIF3A-212ENST00000529205 STRCP1A6NGW2 1772 aa21.27■■□□□ 1
HIF3A-212ENST00000529205 LTKP29376 864 aa21.26■□□□□ 0.99
HIF3A-212ENST00000529205 CEP152O94986 1710 aa21.25■□□□□ 0.99
HIF3A-212ENST00000529205 ARHGAP31Q2M1Z3 1444 aa21.25■□□□□ 0.99
HIF3A-212ENST00000529205 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
HIF3A-212ENST00000529205 MROH1Q8NDA8 1641 aa21.25■□□□□ 0.99
HIF3A-212ENST00000529205 SLIT1O75093 1534 aa21.24■□□□□ 0.99
HIF3A-212ENST00000529205 KANK1Q14678 1352 aa21.24■□□□□ 0.99
HIF3A-212ENST00000529205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
HIF3A-212ENST00000529205 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
HIF3A-212ENST00000529205 KIF15Q9NS87 1388 aa21.23■□□□□ 0.99
HIF3A-212ENST00000529205 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
HIF3A-212ENST00000529205 ARHGAP23Q9P227 1491 aa21.23■□□□□ 0.99
HIF3A-212ENST00000529205 ERBINQ96RT1 1412 aa21.22■□□□□ 0.99
HIF3A-212ENST00000529205 APLP2Q06481 763 aa21.21■□□□□ 0.99
HIF3A-212ENST00000529205 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
HIF3A-212ENST00000529205 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
HIF3A-212ENST00000529205 TMEM2Q9UHN6 1383 aa21.19■□□□□ 0.98
HIF3A-212ENST00000529205 FAM135BQ49AJ0 1406 aa21.17■□□□□ 0.98
HIF3A-212ENST00000529205 ABCC5O15440 1437 aa21.15■□□□□ 0.98
HIF3A-212ENST00000529205 LOC105371045A0A1W2PR82 267 aa21.15■□□□□ 0.98
HIF3A-212ENST00000529205 KCNA6P17658 529 aa21.15■□□□□ 0.98
HIF3A-212ENST00000529205 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
HIF3A-212ENST00000529205 PIK3C2BO00750 1634 aa21.14■□□□□ 0.97
HIF3A-212ENST00000529205 TMEM94Q12767 1356 aa21.13■□□□□ 0.97
HIF3A-212ENST00000529205 IDI1Q13907 227 aa21.13■□□□□ 0.97
HIF3A-212ENST00000529205 BCANQ96GW7 911 aa21.13■□□□□ 0.97
HIF3A-212ENST00000529205 EFCAB6Q5THR3 1501 aa21.13■□□□□ 0.97
HIF3A-212ENST00000529205 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
HIF3A-212ENST00000529205 RGS17Q9UGC6 210 aaPredicted RBP21.12■□□□□ 0.97
HIF3A-212ENST00000529205 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
HIF3A-212ENST00000529205 DAPK1P53355 1430 aa21.11■□□□□ 0.97
HIF3A-212ENST00000529205 CROCC2H7BZ55 1655 aa21.1■□□□□ 0.97
HIF3A-212ENST00000529205 KDM5AP29375 1690 aaKnown RBP21.1■□□□□ 0.97
HIF3A-212ENST00000529205 PTPN23Q9H3S7 1636 aa21.1■□□□□ 0.97
HIF3A-212ENST00000529205 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
HIF3A-212ENST00000529205 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
HIF3A-212ENST00000529205 SLC52A1Q9NWF4 448 aa21.08■□□□□ 0.97
HIF3A-212ENST00000529205 LMTK2Q8IWU2 1503 aa21.08■□□□□ 0.96
HIF3A-212ENST00000529205 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
HIF3A-212ENST00000529205 MSH6P52701 1360 aa21.06■□□□□ 0.96
HIF3A-212ENST00000529205 RBM33Q96EV2 1170 aaKnown RBP21.04■□□□□ 0.96
HIF3A-212ENST00000529205 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
HIF3A-212ENST00000529205 TET3O43151 1660 aa21.03■□□□□ 0.96
HIF3A-212ENST00000529205 NKTRP30414 1462 aaKnown RBP21.03■□□□□ 0.96
HIF3A-212ENST00000529205 ROBO1Q9Y6N7 1651 aa21.02■□□□□ 0.96
HIF3A-212ENST00000529205 POTEAQ6S8J7 498 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms