RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 DUOX2Q9NRD8 1548 aa20.08■□□□□ 0.81
PDZD3-209ENST00000528730 SETD1BQ9UPS6 1966 aaKnown RBP20.07■□□□□ 0.8
PDZD3-209ENST00000528730 WASHC2CQ9Y4E1 1318 aa20.06■□□□□ 0.8
PDZD3-209ENST00000528730 EIF2AK4Q9P2K8 1649 aaKnown RBP20.06■□□□□ 0.8
PDZD3-209ENST00000528730 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
PDZD3-209ENST00000528730 ANKRD30AQ9BXX3 1397 aa20.06■□□□□ 0.8
PDZD3-209ENST00000528730 KDM5DQ9BY66 1539 aa20.05■□□□□ 0.8
PDZD3-209ENST00000528730 ITGAEP38570 1179 aa20.03■□□□□ 0.8
PDZD3-209ENST00000528730 TRIM26Q12899 539 aaPredicted RBP20.03■□□□□ 0.8
PDZD3-209ENST00000528730 RNF17Q9BXT8 1623 aaKnown RBP20.02■□□□□ 0.8
PDZD3-209ENST00000528730 NPATQ14207 1427 aa20.01■□□□□ 0.79
PDZD3-209ENST00000528730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.79
PDZD3-209ENST00000528730 FAM135AQ9P2D6 1515 aa20■□□□□ 0.79
PDZD3-209ENST00000528730 ERBINQ96RT1 1412 aa20■□□□□ 0.79
PDZD3-209ENST00000528730 CEP152O94986 1710 aa19.99■□□□□ 0.79
PDZD3-209ENST00000528730 ZC3H13Q5T200 1668 aaKnown RBP19.98■□□□□ 0.79
PDZD3-209ENST00000528730 PTPRKQ15262 1439 aa19.97■□□□□ 0.79
PDZD3-209ENST00000528730 MYO3AQ8NEV4 1616 aa19.97■□□□□ 0.79
PDZD3-209ENST00000528730 KANK1Q14678 1352 aa19.95■□□□□ 0.79
PDZD3-209ENST00000528730 NCOA1Q15788 1441 aa19.95■□□□□ 0.78
PDZD3-209ENST00000528730 ABCC3O15438 1527 aa19.95■□□□□ 0.78
PDZD3-209ENST00000528730 ADGRL2O95490 1459 aa19.94■□□□□ 0.78
PDZD3-209ENST00000528730 PZPP20742 1482 aa19.93■□□□□ 0.78
PDZD3-209ENST00000528730 FBXO31Q5XUX0 539 aaPredicted RBP19.93■□□□□ 0.78
PDZD3-209ENST00000528730 CFAP65Q6ZU64 1925 aaKnown RBP19.93■□□□□ 0.78
PDZD3-209ENST00000528730 CAMSAP1Q5T5Y3 1602 aa19.93■□□□□ 0.78
PDZD3-209ENST00000528730 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
PDZD3-209ENST00000528730 TNRQ92752 1358 aa19.92■□□□□ 0.78
PDZD3-209ENST00000528730 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
PDZD3-209ENST00000528730 PRDM15P57071 1507 aaPredicted RBP19.91■□□□□ 0.78
PDZD3-209ENST00000528730 ZNF142P52746 1687 aaPredicted RBP19.9■□□□□ 0.78
PDZD3-209ENST00000528730 DEPDC5O75140 1603 aa19.89■□□□□ 0.77
PDZD3-209ENST00000528730 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.77
PDZD3-209ENST00000528730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDZD3-209ENST00000528730 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
PDZD3-209ENST00000528730 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
PDZD3-209ENST00000528730 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
PDZD3-209ENST00000528730 A2ML1A8K2U0 1454 aa19.85■□□□□ 0.77
PDZD3-209ENST00000528730 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
PDZD3-209ENST00000528730 ROCK1Q13464 1354 aa19.83■□□□□ 0.77
PDZD3-209ENST00000528730 ERVK-7P63135 1459 aa19.83■□□□□ 0.76
PDZD3-209ENST00000528730 NLRP1Q9C000 1473 aa19.8■□□□□ 0.76
PDZD3-209ENST00000528730 SPATA31D1Q6ZQQ2 1576 aa19.8■□□□□ 0.76
PDZD3-209ENST00000528730 NCKAP5LQ9HCH0 1330 aa19.79■□□□□ 0.76
PDZD3-209ENST00000528730 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
PDZD3-209ENST00000528730 UNC13BO14795 1591 aa19.77■□□□□ 0.76
PDZD3-209ENST00000528730 ARHGAP31Q2M1Z3 1444 aa19.76■□□□□ 0.75
PDZD3-209ENST00000528730 VWDEQ8N2E2 1590 aa19.76■□□□□ 0.75
PDZD3-209ENST00000528730 PLA2R1Q13018 1463 aa19.76■□□□□ 0.75
PDZD3-209ENST00000528730 THEMISQ8N1K5 641 aaPredicted RBP19.76■□□□□ 0.75
PDZD3-209ENST00000528730 STAG3Q9UJ98 1225 aa19.76■□□□□ 0.75
PDZD3-209ENST00000528730 EFCAB6Q5THR3 1501 aa19.76■□□□□ 0.75
PDZD3-209ENST00000528730 LMTK2Q8IWU2 1503 aa19.76■□□□□ 0.75
PDZD3-209ENST00000528730 POLR1AO95602 1720 aaPredicted RBP19.75■□□□□ 0.75
PDZD3-209ENST00000528730 PKD2Q13563 968 aa19.74■□□□□ 0.75
PDZD3-209ENST00000528730 PTPRTO14522 1441 aa19.74■□□□□ 0.75
PDZD3-209ENST00000528730 TET3O43151 1660 aa19.74■□□□□ 0.75
PDZD3-209ENST00000528730 GCC2Q8IWJ2 1684 aa19.73■□□□□ 0.75
PDZD3-209ENST00000528730 NUP155O75694 1391 aa19.72■□□□□ 0.75
PDZD3-209ENST00000528730 ANKLE2Q86XL3 938 aa19.71■□□□□ 0.75
PDZD3-209ENST00000528730 IQGAP3Q86VI3 1631 aa19.69■□□□□ 0.74
PDZD3-209ENST00000528730 UBR1Q8IWV7 1749 aa19.69■□□□□ 0.74
PDZD3-209ENST00000528730 PIK3C2BO00750 1634 aa19.69■□□□□ 0.74
PDZD3-209ENST00000528730 RPRD2Q5VT52 1461 aaKnown RBP19.67■□□□□ 0.74
PDZD3-209ENST00000528730 SYNMO15061 1565 aa19.66■□□□□ 0.74
PDZD3-209ENST00000528730 ILDR1Q86SU0 546 aaPredicted RBP19.66■□□□□ 0.74
PDZD3-209ENST00000528730 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
PDZD3-209ENST00000528730 E9PCH4 1651 aa19.65■□□□□ 0.74
PDZD3-209ENST00000528730 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
PDZD3-209ENST00000528730 NAIPQ13075 1403 aa19.65■□□□□ 0.74
PDZD3-209ENST00000528730 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
PDZD3-209ENST00000528730 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
PDZD3-209ENST00000528730 NOS1P29475 1434 aa19.62■□□□□ 0.73
PDZD3-209ENST00000528730 IDI1Q13907 227 aa19.62■□□□□ 0.73
PDZD3-209ENST00000528730 EID1Q9Y6B2 187 aa19.62■□□□□ 0.73
PDZD3-209ENST00000528730 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
PDZD3-209ENST00000528730 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
PDZD3-209ENST00000528730 SLC52A1Q9NWF4 448 aa19.61■□□□□ 0.73
PDZD3-209ENST00000528730 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
PDZD3-209ENST00000528730 ZNF335Q9H4Z2 1342 aaPredicted RBP19.6■□□□□ 0.73
PDZD3-209ENST00000528730 FBXO41Q8TF61 875 aa19.6■□□□□ 0.73
PDZD3-209ENST00000528730 ADGRB3O60242 1522 aa19.6■□□□□ 0.73
PDZD3-209ENST00000528730 TXNDC2Q86VQ3 553 aa19.59■□□□□ 0.73
PDZD3-209ENST00000528730 SCAF11Q99590 1463 aaKnown RBP19.59■□□□□ 0.73
PDZD3-209ENST00000528730 KDM5AP29375 1690 aaKnown RBP19.57■□□□□ 0.72
PDZD3-209ENST00000528730 BCANQ96GW7 911 aa19.57■□□□□ 0.72
PDZD3-209ENST00000528730 MYO5BQ9ULV0 1848 aa19.56■□□□□ 0.72
PDZD3-209ENST00000528730 SPHKAPQ2M3C7 1700 aa19.56■□□□□ 0.72
PDZD3-209ENST00000528730 SLIT1O75093 1534 aa19.56■□□□□ 0.72
PDZD3-209ENST00000528730 TMEM2Q9UHN6 1383 aa19.55■□□□□ 0.72
PDZD3-209ENST00000528730 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
PDZD3-209ENST00000528730 MED14O60244 1454 aa19.54■□□□□ 0.72
PDZD3-209ENST00000528730 PPP1R15AO75807 674 aaPredicted RBP19.54■□□□□ 0.72
PDZD3-209ENST00000528730 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
PDZD3-209ENST00000528730 ARHGAP23Q9P227 1491 aa19.54■□□□□ 0.72
PDZD3-209ENST00000528730 LTKP29376 864 aa19.53■□□□□ 0.72
PDZD3-209ENST00000528730 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
PDZD3-209ENST00000528730 TMEM131LA2VDJ0 1609 aa19.5■□□□□ 0.71
PDZD3-209ENST00000528730 HDGFP51858 240 aaKnown RBP19.49■□□□□ 0.71
PDZD3-209ENST00000528730 CPS1P31327 1500 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms