RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 DEPDC5O75140 1603 aa20.55■□□□□ 0.88
EIF3F-202ENST00000528653 UNC13BO14795 1591 aa20.53■□□□□ 0.88
EIF3F-202ENST00000528653 PRDM15P57071 1507 aaPredicted RBP20.53■□□□□ 0.88
EIF3F-202ENST00000528653 FER1L4A9Z1Z3 1794 aa20.52■□□□□ 0.88
EIF3F-202ENST00000528653 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
EIF3F-202ENST00000528653 ADAMTSL3P82987 1691 aa20.51■□□□□ 0.87
EIF3F-202ENST00000528653 GGT6Q6P531 493 aa20.51■□□□□ 0.87
EIF3F-202ENST00000528653 SETD5Q9C0A6 1442 aa20.51■□□□□ 0.87
EIF3F-202ENST00000528653 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
EIF3F-202ENST00000528653 CEP152O94986 1710 aa20.47■□□□□ 0.87
EIF3F-202ENST00000528653 CLTCQ00610 1675 aaKnown RBP20.47■□□□□ 0.87
EIF3F-202ENST00000528653 RIMS1Q86UR5 1692 aaKnown RBP20.47■□□□□ 0.87
EIF3F-202ENST00000528653 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
EIF3F-202ENST00000528653 ZC3H13Q5T200 1668 aaKnown RBP20.46■□□□□ 0.87
EIF3F-202ENST00000528653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
EIF3F-202ENST00000528653 FAM135AQ9P2D6 1515 aa20.46■□□□□ 0.87
EIF3F-202ENST00000528653 ABCC3O15438 1527 aa20.45■□□□□ 0.86
EIF3F-202ENST00000528653 VWDEQ8N2E2 1590 aa20.45■□□□□ 0.86
EIF3F-202ENST00000528653 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
EIF3F-202ENST00000528653 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
EIF3F-202ENST00000528653 KANK1Q14678 1352 aa20.43■□□□□ 0.86
EIF3F-202ENST00000528653 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
EIF3F-202ENST00000528653 CNTLNQ9NXG0 1405 aa20.41■□□□□ 0.86
EIF3F-202ENST00000528653 CAMSAP1Q5T5Y3 1602 aa20.41■□□□□ 0.86
EIF3F-202ENST00000528653 MROH2AA6NES4 1674 aa20.41■□□□□ 0.86
EIF3F-202ENST00000528653 NUP155O75694 1391 aa20.4■□□□□ 0.86
EIF3F-202ENST00000528653 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
EIF3F-202ENST00000528653 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
EIF3F-202ENST00000528653 LMTK2Q8IWU2 1503 aa20.38■□□□□ 0.85
EIF3F-202ENST00000528653 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
EIF3F-202ENST00000528653 TET3O43151 1660 aa20.38■□□□□ 0.85
EIF3F-202ENST00000528653 EFCAB6Q5THR3 1501 aa20.37■□□□□ 0.85
EIF3F-202ENST00000528653 C3P01024 1663 aa20.36■□□□□ 0.85
EIF3F-202ENST00000528653 PZPP20742 1482 aa20.36■□□□□ 0.85
EIF3F-202ENST00000528653 PTPRMP28827 1452 aa20.36■□□□□ 0.85
EIF3F-202ENST00000528653 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
EIF3F-202ENST00000528653 ZMYM3Q14202 1370 aa20.32■□□□□ 0.84
EIF3F-202ENST00000528653 E9PCH4 1651 aa20.32■□□□□ 0.84
EIF3F-202ENST00000528653 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
EIF3F-202ENST00000528653 NPATQ14207 1427 aa20.3■□□□□ 0.84
EIF3F-202ENST00000528653 HRCP23327 699 aa20.3■□□□□ 0.84
EIF3F-202ENST00000528653 ACIN1Q9UKV3 1341 aaKnown RBP20.29■□□□□ 0.84
EIF3F-202ENST00000528653 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
EIF3F-202ENST00000528653 CEBPAP49715 358 aaPredicted RBP20.28■□□□□ 0.84
EIF3F-202ENST00000528653 PREX1Q8TCU6 1659 aa20.27■□□□□ 0.84
EIF3F-202ENST00000528653 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
EIF3F-202ENST00000528653 CFAP65Q6ZU64 1925 aaKnown RBP20.27■□□□□ 0.84
EIF3F-202ENST00000528653 ERVK-7P63135 1459 aa20.26■□□□□ 0.83
EIF3F-202ENST00000528653 RPRD2Q5VT52 1461 aaKnown RBP20.26■□□□□ 0.83
EIF3F-202ENST00000528653 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
EIF3F-202ENST00000528653 SPATA31D1Q6ZQQ2 1576 aa20.24■□□□□ 0.83
EIF3F-202ENST00000528653 PKD2Q13563 968 aa20.23■□□□□ 0.83
EIF3F-202ENST00000528653 SPHKAPQ2M3C7 1700 aa20.22■□□□□ 0.83
EIF3F-202ENST00000528653 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
EIF3F-202ENST00000528653 SYNMO15061 1565 aa20.21■□□□□ 0.83
EIF3F-202ENST00000528653 NOS1P29475 1434 aa20.19■□□□□ 0.82
EIF3F-202ENST00000528653 MYO3AQ8NEV4 1616 aa20.19■□□□□ 0.82
EIF3F-202ENST00000528653 TNRQ92752 1358 aa20.19■□□□□ 0.82
EIF3F-202ENST00000528653 LMTK3Q96Q04 1460 aa20.18■□□□□ 0.82
EIF3F-202ENST00000528653 FOXD1Q16676 465 aa20.18■□□□□ 0.82
EIF3F-202ENST00000528653 TRPM2O94759 1503 aa20.17■□□□□ 0.82
EIF3F-202ENST00000528653 DHX57Q6P158 1386 aaKnown RBP20.16■□□□□ 0.82
EIF3F-202ENST00000528653 UGGT1Q9NYU2 1555 aa20.16■□□□□ 0.82
EIF3F-202ENST00000528653 PTPRTO14522 1441 aa20.15■□□□□ 0.82
EIF3F-202ENST00000528653 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
EIF3F-202ENST00000528653 SETD1BQ9UPS6 1966 aaKnown RBP20.14■□□□□ 0.81
EIF3F-202ENST00000528653 PIK3C2BO00750 1634 aa20.13■□□□□ 0.81
EIF3F-202ENST00000528653 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
EIF3F-202ENST00000528653 ZNF142P52746 1687 aaPredicted RBP20.12■□□□□ 0.81
EIF3F-202ENST00000528653 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
EIF3F-202ENST00000528653 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
EIF3F-202ENST00000528653 UHRF1BP1Q6BDS2 1440 aa20.1■□□□□ 0.81
EIF3F-202ENST00000528653 HSPA2P54652 639 aa20.08■□□□□ 0.81
EIF3F-202ENST00000528653 A2ML1A8K2U0 1454 aa20.07■□□□□ 0.8
EIF3F-202ENST00000528653 ANKRD30BQ9BXX2 1392 aa20.07■□□□□ 0.8
EIF3F-202ENST00000528653 ADGRB3O60242 1522 aa20.07■□□□□ 0.8
EIF3F-202ENST00000528653 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
EIF3F-202ENST00000528653 UBR1Q8IWV7 1749 aa20.05■□□□□ 0.8
EIF3F-202ENST00000528653 IDI1Q13907 227 aa20.04■□□□□ 0.8
EIF3F-202ENST00000528653 SLC52A1Q9NWF4 448 aa20.04■□□□□ 0.8
EIF3F-202ENST00000528653 KIF1BO60333 1816 aa20.03■□□□□ 0.8
EIF3F-202ENST00000528653 MYO5BQ9ULV0 1848 aa20.03■□□□□ 0.8
EIF3F-202ENST00000528653 KDM5AP29375 1690 aaKnown RBP20.02■□□□□ 0.8
EIF3F-202ENST00000528653 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.79
EIF3F-202ENST00000528653 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
EIF3F-202ENST00000528653 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
EIF3F-202ENST00000528653 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
EIF3F-202ENST00000528653 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
EIF3F-202ENST00000528653 FBXO41Q8TF61 875 aa19.94■□□□□ 0.78
EIF3F-202ENST00000528653 NEURL4Q96JN8 1562 aa19.92■□□□□ 0.78
EIF3F-202ENST00000528653 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
EIF3F-202ENST00000528653 SLIT1O75093 1534 aa19.92■□□□□ 0.78
EIF3F-202ENST00000528653 THEMISQ8N1K5 641 aaPredicted RBP19.91■□□□□ 0.78
EIF3F-202ENST00000528653 TMEM2Q9UHN6 1383 aa19.91■□□□□ 0.78
EIF3F-202ENST00000528653 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
EIF3F-202ENST00000528653 POLR1AO95602 1720 aaPredicted RBP19.9■□□□□ 0.78
EIF3F-202ENST00000528653 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
EIF3F-202ENST00000528653 NEXMIFQ5QGS0 1516 aa19.9■□□□□ 0.78
EIF3F-202ENST00000528653 ZFYVE9O95405 1425 aa19.89■□□□□ 0.77
EIF3F-202ENST00000528653 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms