RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 POLR1AO95602 1720 aaPredicted RBP18.06■□□□□ 0.48
CCDC90B-210ENST00000528149 HNRNPMP52272 730 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC90B-210ENST00000528149 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-210ENST00000528149 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
CCDC90B-210ENST00000528149 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-210ENST00000528149 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
CCDC90B-210ENST00000528149 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-210ENST00000528149 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
CCDC90B-210ENST00000528149 PLXNC1O60486 1568 aa18.03■□□□□ 0.48
CCDC90B-210ENST00000528149 VWDEQ8N2E2 1590 aa18.02■□□□□ 0.48
CCDC90B-210ENST00000528149 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.48
CCDC90B-210ENST00000528149 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
CCDC90B-210ENST00000528149 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
CCDC90B-210ENST00000528149 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
CCDC90B-210ENST00000528149 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
CCDC90B-210ENST00000528149 SPAG9O60271 1321 aaKnown RBP17.96■□□□□ 0.46
CCDC90B-210ENST00000528149 A2MP01023 1474 aa17.95■□□□□ 0.46
CCDC90B-210ENST00000528149 GGT6Q6P531 493 aa17.94■□□□□ 0.46
CCDC90B-210ENST00000528149 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
CCDC90B-210ENST00000528149 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-210ENST00000528149 PTPN23Q9H3S7 1636 aa17.92■□□□□ 0.46
CCDC90B-210ENST00000528149 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
CCDC90B-210ENST00000528149 ADGBQ8N7X0 1667 aa17.92■□□□□ 0.46
CCDC90B-210ENST00000528149 STRCP1A6NGW2 1772 aa17.91■□□□□ 0.46
CCDC90B-210ENST00000528149 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
CCDC90B-210ENST00000528149 LRRC7Q96NW7 1537 aa17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 TNRQ92752 1358 aa17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
CCDC90B-210ENST00000528149 SYNMO15061 1565 aa17.88■□□□□ 0.45
CCDC90B-210ENST00000528149 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
CCDC90B-210ENST00000528149 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
CCDC90B-210ENST00000528149 MED14O60244 1454 aa17.87■□□□□ 0.45
CCDC90B-210ENST00000528149 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
CCDC90B-210ENST00000528149 IQGAP1P46940 1657 aa17.87■□□□□ 0.45
CCDC90B-210ENST00000528149 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
CCDC90B-210ENST00000528149 ANKLE2Q86XL3 938 aa17.86■□□□□ 0.45
CCDC90B-210ENST00000528149 MIA2Q96PC5 1412 aa17.85■□□□□ 0.45
CCDC90B-210ENST00000528149 PZPP20742 1482 aa17.83■□□□□ 0.45
CCDC90B-210ENST00000528149 ABCC5O15440 1437 aa17.82■□□□□ 0.44
CCDC90B-210ENST00000528149 UGGT1Q9NYU2 1555 aa17.81■□□□□ 0.44
CCDC90B-210ENST00000528149 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
CCDC90B-210ENST00000528149 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
CCDC90B-210ENST00000528149 FAM135AQ9P2D6 1515 aa17.79■□□□□ 0.44
CCDC90B-210ENST00000528149 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
CCDC90B-210ENST00000528149 DAPK1P53355 1430 aa17.79■□□□□ 0.44
CCDC90B-210ENST00000528149 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
CCDC90B-210ENST00000528149 RTEL1-TNFRSF6BF6WH68 1400 aa17.77■□□□□ 0.44
CCDC90B-210ENST00000528149 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-210ENST00000528149 ZC3H13Q5T200 1668 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-210ENST00000528149 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-210ENST00000528149 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
CCDC90B-210ENST00000528149 MROH1Q8NDA8 1641 aa17.72■□□□□ 0.43
CCDC90B-210ENST00000528149 DHX29Q7Z478 1369 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-210ENST00000528149 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-210ENST00000528149 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
CCDC90B-210ENST00000528149 KIF3BO15066 747 aa17.69■□□□□ 0.42
CCDC90B-210ENST00000528149 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
CCDC90B-210ENST00000528149 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
CCDC90B-210ENST00000528149 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
CCDC90B-210ENST00000528149 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
CCDC90B-210ENST00000528149 SRCAPQ6ZRS2 3230 aa17.67■□□□□ 0.42
CCDC90B-210ENST00000528149 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
CCDC90B-210ENST00000528149 KIF15Q9NS87 1388 aa17.66■□□□□ 0.42
CCDC90B-210ENST00000528149 CEP152O94986 1710 aa17.65■□□□□ 0.42
CCDC90B-210ENST00000528149 ITGAEP38570 1179 aa17.65■□□□□ 0.42
CCDC90B-210ENST00000528149 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCDC90B-210ENST00000528149 SCAF11Q99590 1463 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-210ENST00000528149 DUOX2Q9NRD8 1548 aa17.64■□□□□ 0.41
CCDC90B-210ENST00000528149 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
CCDC90B-210ENST00000528149 EIF2AK4Q9P2K8 1649 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-210ENST00000528149 RSPH4AQ5TD94 716 aa17.63■□□□□ 0.41
CCDC90B-210ENST00000528149 UBR1Q8IWV7 1749 aa17.63■□□□□ 0.41
CCDC90B-210ENST00000528149 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
CCDC90B-210ENST00000528149 ABCC3O15438 1527 aa17.6■□□□□ 0.41
CCDC90B-210ENST00000528149 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-210ENST00000528149 ARHGAP23Q9P227 1491 aa17.57■□□□□ 0.4
CCDC90B-210ENST00000528149 TMEM94Q12767 1356 aa17.57■□□□□ 0.4
CCDC90B-210ENST00000528149 LTKP29376 864 aa17.57■□□□□ 0.4
CCDC90B-210ENST00000528149 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
CCDC90B-210ENST00000528149 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
CCDC90B-210ENST00000528149 PHLPP1O60346 1717 aa17.56■□□□□ 0.4
CCDC90B-210ENST00000528149 SLIT1O75093 1534 aa17.56■□□□□ 0.4
CCDC90B-210ENST00000528149 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
CCDC90B-210ENST00000528149 LRP6O75581 1613 aa17.54■□□□□ 0.4
CCDC90B-210ENST00000528149 JCADQ9P266 1359 aa17.54■□□□□ 0.4
CCDC90B-210ENST00000528149 GCC2Q8IWJ2 1684 aa17.53■□□□□ 0.4
CCDC90B-210ENST00000528149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC90B-210ENST00000528149 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
CCDC90B-210ENST00000528149 CFAP65Q6ZU64 1925 aaKnown RBP17.52■□□□□ 0.4
CCDC90B-210ENST00000528149 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
CCDC90B-210ENST00000528149 ANKRD50Q9ULJ7 1429 aa17.5■□□□□ 0.39
CCDC90B-210ENST00000528149 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
CCDC90B-210ENST00000528149 UNC13BO14795 1591 aa17.49■□□□□ 0.39
CCDC90B-210ENST00000528149 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
CCDC90B-210ENST00000528149 ZNF772Q68DY9 489 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-210ENST00000528149 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms