RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 MAP3K1Q13233 1512 aa35.19■■■■□ 3.22
TRAPPC4-208ENST00000527680 CEP170BQ9Y4F5 1589 aaPredicted RBP35.19■■■■□ 3.22
TRAPPC4-208ENST00000527680 ZNF142P52746 1687 aaPredicted RBP35.16■■■■□ 3.22
TRAPPC4-208ENST00000527680 TNRQ92752 1358 aa35.13■■■■□ 3.21
TRAPPC4-208ENST00000527680 PLA2R1Q13018 1463 aa35.13■■■■□ 3.21
TRAPPC4-208ENST00000527680 MYOM3Q5VTT5 1437 aa35.13■■■■□ 3.21
TRAPPC4-208ENST00000527680 KDM5DQ9BY66 1539 aa35.12■■■■□ 3.21
TRAPPC4-208ENST00000527680 A2ML1A8K2U0 1454 aa35.11■■■■□ 3.21
TRAPPC4-208ENST00000527680 LTBP4Q8N2S1 1624 aa35.11■■■■□ 3.21
TRAPPC4-208ENST00000527680 MIA2Q96PC5 1412 aa35.11■■■■□ 3.21
TRAPPC4-208ENST00000527680 ZNF335Q9H4Z2 1342 aaPredicted RBP35.09■■■■□ 3.21
TRAPPC4-208ENST00000527680 PZPP20742 1482 aa35.08■■■■□ 3.21
TRAPPC4-208ENST00000527680 FAM135AQ9P2D6 1515 aa35.06■■■■□ 3.2
TRAPPC4-208ENST00000527680 TCOF1Q13428 1488 aaKnown RBP35.05■■■■□ 3.2
TRAPPC4-208ENST00000527680 DNMT1P26358 1616 aaKnown RBP35.05■■■■□ 3.2
TRAPPC4-208ENST00000527680 MAST1Q9Y2H9 1570 aa35.03■■■■□ 3.2
TRAPPC4-208ENST00000527680 THEMISQ8N1K5 641 aaPredicted RBP35.01■■■■□ 3.2
TRAPPC4-208ENST00000527680 IQSEC2Q5JU85 1478 aa34.98■■■■□ 3.19
TRAPPC4-208ENST00000527680 ANKLE2Q86XL3 938 aa34.98■■■■□ 3.19
TRAPPC4-208ENST00000527680 RRP7BPQ9NSQ0 103 aa34.95■■■■□ 3.19
TRAPPC4-208ENST00000527680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.94■■■■□ 3.183e-6■■■■□ 26.4
TRAPPC4-208ENST00000527680 UBAP1LF5GYI3 381 aa34.93■■■■□ 3.18
TRAPPC4-208ENST00000527680 RNF17Q9BXT8 1623 aaKnown RBP34.92■■■■□ 3.18
TRAPPC4-208ENST00000527680 NLRP1Q9C000 1473 aa34.91■■■■□ 3.18
TRAPPC4-208ENST00000527680 EIF2AK4Q9P2K8 1649 aaKnown RBP34.9■■■■□ 3.18
TRAPPC4-208ENST00000527680 ABCC3O15438 1527 aa34.9■■■■□ 3.18
TRAPPC4-208ENST00000527680 DUOX2Q9NRD8 1548 aa34.9■■■■□ 3.18
TRAPPC4-208ENST00000527680 PTPN23Q9H3S7 1636 aa34.88■■■■□ 3.17
TRAPPC4-208ENST00000527680 UGGT1Q9NYU2 1555 aa34.88■■■■□ 3.17
TRAPPC4-208ENST00000527680 ABCC5O15440 1437 aa34.88■■■■□ 3.17
TRAPPC4-208ENST00000527680 KIF15Q9NS87 1388 aa34.87■■■■□ 3.17
TRAPPC4-208ENST00000527680 CFAP65Q6ZU64 1925 aaKnown RBP34.87■■■■□ 3.17
TRAPPC4-208ENST00000527680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.87■■■■□ 3.17
TRAPPC4-208ENST00000527680 ZC3H13Q5T200 1668 aaKnown RBP34.86■■■■□ 3.17
TRAPPC4-208ENST00000527680 POLR1AO95602 1720 aaPredicted RBP34.85■■■■□ 3.17
TRAPPC4-208ENST00000527680 CHIC2Q9UKJ5 165 aa34.85■■■■□ 3.17
TRAPPC4-208ENST00000527680 DISP3Q9P2K9 1392 aa34.84■■■■□ 3.17
TRAPPC4-208ENST00000527680 FGD6Q6ZV73 1430 aa34.81■■■■□ 3.16
TRAPPC4-208ENST00000527680 DAPK1P53355 1430 aa34.81■■■■□ 3.16
TRAPPC4-208ENST00000527680 SHANK2Q9UPX8 1470 aa34.79■■■■□ 3.16
TRAPPC4-208ENST00000527680 CEP152O94986 1710 aa34.79■■■■□ 3.16
TRAPPC4-208ENST00000527680 NEURL4Q96JN8 1562 aa34.79■■■■□ 3.16
TRAPPC4-208ENST00000527680 ERVK-7P63135 1459 aa34.78■■■■□ 3.16
TRAPPC4-208ENST00000527680 MROH1Q8NDA8 1641 aa34.78■■■■□ 3.16
TRAPPC4-208ENST00000527680 SPATA31D1Q6ZQQ2 1576 aa34.77■■■■□ 3.16
TRAPPC4-208ENST00000527680 NPHP4O75161 1426 aaPredicted RBP34.76■■■■□ 3.16
TRAPPC4-208ENST00000527680 ERBINQ96RT1 1412 aa34.76■■■■□ 3.16
TRAPPC4-208ENST00000527680 CROCC2H7BZ55 1655 aa34.76■■■■□ 3.15
TRAPPC4-208ENST00000527680 KANK1Q14678 1352 aa34.74■■■■□ 3.15
TRAPPC4-208ENST00000527680 ANKRD30AQ9BXX3 1397 aa34.74■■■■□ 3.15
TRAPPC4-208ENST00000527680 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
TRAPPC4-208ENST00000527680 SCAF1Q9H7N4 1312 aaKnown RBP34.73■■■■□ 3.15
TRAPPC4-208ENST00000527680 TOM1O60784 492 aa34.69■■■■□ 3.14
TRAPPC4-208ENST00000527680 MED14O60244 1454 aa34.69■■■■□ 3.14
TRAPPC4-208ENST00000527680 CPS1P31327 1500 aa34.69■■■■□ 3.14
TRAPPC4-208ENST00000527680 DEPDC5O75140 1603 aa34.69■■■■□ 3.14
TRAPPC4-208ENST00000527680 PIP4K2BP78356 416 aa34.68■■■■□ 3.14
TRAPPC4-208ENST00000527680 PRDM15P57071 1507 aaPredicted RBP34.65■■■■□ 3.14
TRAPPC4-208ENST00000527680 ARHGAP31Q2M1Z3 1444 aa34.65■■■■□ 3.14
TRAPPC4-208ENST00000527680 STAG3Q9UJ98 1225 aa34.65■■■■□ 3.14
TRAPPC4-208ENST00000527680 TXNDC2Q86VQ3 553 aa34.63■■■■□ 3.13
TRAPPC4-208ENST00000527680 IQGAP1P46940 1657 aa34.63■■■■□ 3.13
TRAPPC4-208ENST00000527680 VWDEQ8N2E2 1590 aa34.61■■■■□ 3.13
TRAPPC4-208ENST00000527680 EID1Q9Y6B2 187 aa34.6■■■■□ 3.13
TRAPPC4-208ENST00000527680 UBR1Q8IWV7 1749 aa34.59■■■■□ 3.13
TRAPPC4-208ENST00000527680 ILDR2Q71H61 639 aa34.59■■■■□ 3.13
TRAPPC4-208ENST00000527680 LTKP29376 864 aa34.57■■■■□ 3.12
TRAPPC4-208ENST00000527680 SCAF11Q99590 1463 aaKnown RBP34.53■■■■□ 3.12
TRAPPC4-208ENST00000527680 HSPA1LP34931 641 aa34.51■■■■□ 3.12
TRAPPC4-208ENST00000527680 IDI1Q13907 227 aa34.51■■■■□ 3.12
TRAPPC4-208ENST00000527680 ADGRL2O95490 1459 aa34.47■■■■□ 3.11
TRAPPC4-208ENST00000527680 ARHGAP23Q9P227 1491 aa34.46■■■■□ 3.11
TRAPPC4-208ENST00000527680 SLIT1O75093 1534 aa34.46■■■■□ 3.11
TRAPPC4-208ENST00000527680 LMTK2Q8IWU2 1503 aa34.46■■■■□ 3.11
TRAPPC4-208ENST00000527680 PIK3C2BO00750 1634 aa34.46■■■■□ 3.11
TRAPPC4-208ENST00000527680 ANKRD50Q9ULJ7 1429 aa34.45■■■■□ 3.11
TRAPPC4-208ENST00000527680 TMEM2Q9UHN6 1383 aa34.44■■■■□ 3.1
TRAPPC4-208ENST00000527680 STRCP1A6NGW2 1772 aa34.43■■■■□ 3.1
TRAPPC4-208ENST00000527680 LRRC7Q96NW7 1537 aa34.42■■■■□ 3.1
TRAPPC4-208ENST00000527680 SLC52A1Q9NWF4 448 aa34.4■■■■□ 3.1
TRAPPC4-208ENST00000527680 SENP3Q9H4L4 574 aaPredicted RBP34.39■■■■□ 3.1
TRAPPC4-208ENST00000527680 SOCS7O14512 581 aa34.38■■■■□ 3.09
TRAPPC4-208ENST00000527680 EFCAB6Q5THR3 1501 aa34.38■■■■□ 3.09
TRAPPC4-208ENST00000527680 BCANQ96GW7 911 aa34.37■■■■□ 3.09
TRAPPC4-208ENST00000527680 PPARGC1BQ86YN6 1023 aaKnown RBP34.36■■■■□ 3.09
TRAPPC4-208ENST00000527680 NOS1P29475 1434 aa34.35■■■■□ 3.09
TRAPPC4-208ENST00000527680 ITGAEP38570 1179 aa34.34■■■■□ 3.09
TRAPPC4-208ENST00000527680 SYNMO15061 1565 aa34.33■■■■□ 3.09
TRAPPC4-208ENST00000527680 SLC26A8Q96RN1 970 aa34.33■■■■□ 3.09
TRAPPC4-208ENST00000527680 KDM5AP29375 1690 aaKnown RBP34.31■■■■□ 3.08
TRAPPC4-208ENST00000527680 RPRD2Q5VT52 1461 aaKnown RBP34.27■■■■□ 3.08
TRAPPC4-208ENST00000527680 ALKQ9UM73 1620 aa34.26■■■■□ 3.08
TRAPPC4-208ENST00000527680 CHGAP10645 457 aaKnown RBP34.25■■■■□ 3.07
TRAPPC4-208ENST00000527680 KCNA6P17658 529 aa34.25■■■■□ 3.07
TRAPPC4-208ENST00000527680 HDGFP51858 240 aaKnown RBP34.25■■■■□ 3.07
TRAPPC4-208ENST00000527680 ADGRB3O60242 1522 aa34.24■■■■□ 3.07
TRAPPC4-208ENST00000527680 PROSER2Q86WR7 435 aaPredicted RBP34.23■■■■□ 3.07
TRAPPC4-208ENST00000527680 PPP1R15AO75807 674 aaPredicted RBP34.22■■■■□ 3.07
TRAPPC4-208ENST00000527680 ROCK1Q13464 1354 aa34.22■■■■□ 3.07
TRAPPC4-208ENST00000527680 TET3O43151 1660 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms