RNA–Protein interactions for RNA: ENST00000527653.1

GPAA1-209, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-209ENST00000527653 PPP6R1Q9UPN7 881 aa29.23■■■□□ 2.27
GPAA1-209ENST00000527653 FAM135AQ9P2D6 1515 aa29.21■■■□□ 2.27
GPAA1-209ENST00000527653 ITGAEP38570 1179 aa29.21■■■□□ 2.27
GPAA1-209ENST00000527653 RNF17Q9BXT8 1623 aaKnown RBP29.2■■■□□ 2.27
GPAA1-209ENST00000527653 C3P01024 1663 aa29.2■■■□□ 2.26
GPAA1-209ENST00000527653 NCOA1Q15788 1441 aa29.2■■■□□ 2.26
GPAA1-209ENST00000527653 KDM5DQ9BY66 1539 aa29.19■■■□□ 2.26
GPAA1-209ENST00000527653 ZC3H13Q5T200 1668 aaKnown RBP29.15■■■□□ 2.26
GPAA1-209ENST00000527653 WASHC2CQ9Y4E1 1318 aa29.13■■■□□ 2.25
GPAA1-209ENST00000527653 ROCK1Q13464 1354 aa29.13■■■□□ 2.25
GPAA1-209ENST00000527653 CEBPAP49715 358 aaPredicted RBP29.12■■■□□ 2.25
GPAA1-209ENST00000527653 PREX1Q8TCU6 1659 aa29.1■■■□□ 2.25
GPAA1-209ENST00000527653 ZMYM3Q14202 1370 aa29.1■■■□□ 2.25
GPAA1-209ENST00000527653 PTPRKQ15262 1439 aa29.1■■■□□ 2.25
GPAA1-209ENST00000527653 KANK1Q14678 1352 aa29.09■■■□□ 2.25
GPAA1-209ENST00000527653 ANKRD50Q9ULJ7 1429 aa29.09■■■□□ 2.25
GPAA1-209ENST00000527653 PRDM15P57071 1507 aaPredicted RBP29.08■■■□□ 2.25
GPAA1-209ENST00000527653 DEPDC5O75140 1603 aa29.07■■■□□ 2.24
GPAA1-209ENST00000527653 MROH1Q8NDA8 1641 aa29.05■■■□□ 2.24
GPAA1-209ENST00000527653 CEP152O94986 1710 aa29.05■■■□□ 2.24
GPAA1-209ENST00000527653 NPATQ14207 1427 aa29.03■■■□□ 2.24
GPAA1-209ENST00000527653 SETD1BQ9UPS6 1966 aaKnown RBP29.03■■■□□ 2.24
GPAA1-209ENST00000527653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.03■■■□□ 2.24
GPAA1-209ENST00000527653 ABCC3O15438 1527 aa29.03■■■□□ 2.24
GPAA1-209ENST00000527653 UHRF1BP1Q6BDS2 1440 aa29.03■■■□□ 2.24
GPAA1-209ENST00000527653 CAMSAP1Q5T5Y3 1602 aa28.99■■■□□ 2.23
GPAA1-209ENST00000527653 PZPP20742 1482 aa28.98■■■□□ 2.23
GPAA1-209ENST00000527653 LMTK3Q96Q04 1460 aa28.98■■■□□ 2.23
GPAA1-209ENST00000527653 GCC2Q8IWJ2 1684 aa28.96■■■□□ 2.23
GPAA1-209ENST00000527653 UNC13BO14795 1591 aa28.93■■■□□ 2.22
GPAA1-209ENST00000527653 MYO3AQ8NEV4 1616 aa28.92■■■□□ 2.22
GPAA1-209ENST00000527653 VWDEQ8N2E2 1590 aa28.88■■■□□ 2.21
GPAA1-209ENST00000527653 LMTK2Q8IWU2 1503 aa28.88■■■□□ 2.21
GPAA1-209ENST00000527653 TNRQ92752 1358 aa28.88■■■□□ 2.21
GPAA1-209ENST00000527653 ZNF142P52746 1687 aaPredicted RBP28.86■■■□□ 2.21
GPAA1-209ENST00000527653 HFM1A2PYH4 1435 aa28.86■■■□□ 2.21
GPAA1-209ENST00000527653 ARHGAP31Q2M1Z3 1444 aa28.85■■■□□ 2.21
GPAA1-209ENST00000527653 NAIPQ13075 1403 aa28.84■■■□□ 2.21
GPAA1-209ENST00000527653 EFCAB6Q5THR3 1501 aa28.84■■■□□ 2.21
GPAA1-209ENST00000527653 CEP170BQ9Y4F5 1589 aaPredicted RBP28.84■■■□□ 2.21
GPAA1-209ENST00000527653 TET3O43151 1660 aa28.83■■■□□ 2.21
GPAA1-209ENST00000527653 CFAP65Q6ZU64 1925 aaKnown RBP28.83■■■□□ 2.21
GPAA1-209ENST00000527653 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
GPAA1-209ENST00000527653 HSPA2P54652 639 aa28.82■■■□□ 2.2
GPAA1-209ENST00000527653 ERVK-7P63135 1459 aa28.82■■■□□ 2.2
GPAA1-209ENST00000527653 SPATA31D1Q6ZQQ2 1576 aa28.82■■■□□ 2.2
GPAA1-209ENST00000527653 IQGAP3Q86VI3 1631 aa28.81■■■□□ 2.2
GPAA1-209ENST00000527653 NUP155O75694 1391 aa28.79■■■□□ 2.2
GPAA1-209ENST00000527653 NLRP1Q9C000 1473 aa28.78■■■□□ 2.2
GPAA1-209ENST00000527653 A2ML1A8K2U0 1454 aa28.78■■■□□ 2.2
GPAA1-209ENST00000527653 RPRD2Q5VT52 1461 aaKnown RBP28.76■■■□□ 2.19
GPAA1-209ENST00000527653 TRIM52Q96A61 297 aa28.7■■■□□ 2.18
GPAA1-209ENST00000527653 UGGT1Q9NYU2 1555 aa28.7■■■□□ 2.18
GPAA1-209ENST00000527653 E9PCH4 1651 aa28.68■■■□□ 2.18
GPAA1-209ENST00000527653 ACIN1Q9UKV3 1341 aaKnown RBP28.65■■■□□ 2.18
GPAA1-209ENST00000527653 PLA2R1Q13018 1463 aa28.65■■■□□ 2.18
GPAA1-209ENST00000527653 THEMISQ8N1K5 641 aaPredicted RBP28.63■■■□□ 2.17
GPAA1-209ENST00000527653 STAG3Q9UJ98 1225 aa28.63■■■□□ 2.17
GPAA1-209ENST00000527653 DMRT2Q9Y5R5 561 aa28.63■■■□□ 2.17
GPAA1-209ENST00000527653 NOS1P29475 1434 aa28.62■■■□□ 2.17
GPAA1-209ENST00000527653 STRCQ7RTU9 1775 aa28.62■■■□□ 2.17
GPAA1-209ENST00000527653 SYNMO15061 1565 aa28.62■■■□□ 2.17
GPAA1-209ENST00000527653 SETD5Q9C0A6 1442 aa28.61■■■□□ 2.17
GPAA1-209ENST00000527653 PIK3C2BO00750 1634 aa28.6■■■□□ 2.17
GPAA1-209ENST00000527653 POLR1AO95602 1720 aaPredicted RBP28.6■■■□□ 2.17
GPAA1-209ENST00000527653 UBR1Q8IWV7 1749 aa28.6■■■□□ 2.17
GPAA1-209ENST00000527653 SLC52A1Q9NWF4 448 aa28.57■■■□□ 2.16
GPAA1-209ENST00000527653 KDM5AP29375 1690 aaKnown RBP28.57■■■□□ 2.16
GPAA1-209ENST00000527653 SPHKAPQ2M3C7 1700 aa28.57■■■□□ 2.16
GPAA1-209ENST00000527653 PKD2Q13563 968 aa28.56■■■□□ 2.16
GPAA1-209ENST00000527653 SLC4A1APQ9BWU0 796 aaKnown RBP28.55■■■□□ 2.16
GPAA1-209ENST00000527653 ADGRB3O60242 1522 aa28.53■■■□□ 2.16
GPAA1-209ENST00000527653 ANKLE2Q86XL3 938 aa28.51■■■□□ 2.15
GPAA1-209ENST00000527653 PTPRTO14522 1441 aa28.51■■■□□ 2.15
GPAA1-209ENST00000527653 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
GPAA1-209ENST00000527653 NCKAP5LQ9HCH0 1330 aa28.5■■■□□ 2.15
GPAA1-209ENST00000527653 IDI1Q13907 227 aa28.5■■■□□ 2.15
GPAA1-209ENST00000527653 CHGAP10645 457 aaKnown RBP28.45■■■□□ 2.14
GPAA1-209ENST00000527653 EID1Q9Y6B2 187 aa28.45■■■□□ 2.14
GPAA1-209ENST00000527653 SLIT1O75093 1534 aa28.43■■■□□ 2.14
GPAA1-209ENST00000527653 TRPM2O94759 1503 aa28.43■■■□□ 2.14
GPAA1-209ENST00000527653 MYO5BQ9ULV0 1848 aa28.41■■■□□ 2.14
GPAA1-209ENST00000527653 SCAF11Q99590 1463 aaKnown RBP28.41■■■□□ 2.14
GPAA1-209ENST00000527653 NEURL4Q96JN8 1562 aa28.41■■■□□ 2.14
GPAA1-209ENST00000527653 TMEM131LA2VDJ0 1609 aa28.4■■■□□ 2.14
GPAA1-209ENST00000527653 TMEM2Q9UHN6 1383 aa28.4■■■□□ 2.14
GPAA1-209ENST00000527653 IQGAP1P46940 1657 aa28.4■■■□□ 2.14
GPAA1-209ENST00000527653 MPHOSPH9Q99550 1183 aa28.4■■■□□ 2.14
GPAA1-209ENST00000527653 ARHGAP23Q9P227 1491 aa28.4■■■□□ 2.14
GPAA1-209ENST00000527653 NPHP4O75161 1426 aaPredicted RBP28.38■■■□□ 2.13
GPAA1-209ENST00000527653 KIF1BO60333 1816 aa28.37■■■□□ 2.13
GPAA1-209ENST00000527653 HDGFP51858 240 aaKnown RBP28.37■■■□□ 2.13
GPAA1-209ENST00000527653 TXNDC2Q86VQ3 553 aa28.37■■■□□ 2.13
GPAA1-209ENST00000527653 MED14O60244 1454 aa28.36■■■□□ 2.13
GPAA1-209ENST00000527653 CLTCL1P53675 1640 aa28.36■■■□□ 2.13
GPAA1-209ENST00000527653 HRCP23327 699 aa28.34■■■□□ 2.13
GPAA1-209ENST00000527653 PPP1R15AO75807 674 aaPredicted RBP28.33■■■□□ 2.13
GPAA1-209ENST00000527653 RIMS2Q9UQ26 1411 aa28.3■■■□□ 2.12
GPAA1-209ENST00000527653 TRIM26Q12899 539 aaPredicted RBP28.3■■■□□ 2.12
GPAA1-209ENST00000527653 CCDC144AA2RUR9 1427 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms