RNA–Protein interactions for RNA: ENST00000527308.5

PDZD3-207, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-207ENST00000527308 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
PDZD3-207ENST00000527308 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
PDZD3-207ENST00000527308 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
PDZD3-207ENST00000527308 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
PDZD3-207ENST00000527308 SHANK2Q9UPX8 1470 aa16.46■□□□□ 0.23
PDZD3-207ENST00000527308 HSPA1LP34931 641 aa16.45■□□□□ 0.22
PDZD3-207ENST00000527308 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
PDZD3-207ENST00000527308 PZPP20742 1482 aa16.44■□□□□ 0.22
PDZD3-207ENST00000527308 TNRQ92752 1358 aa16.44■□□□□ 0.22
PDZD3-207ENST00000527308 KDM5DQ9BY66 1539 aa16.43■□□□□ 0.22
PDZD3-207ENST00000527308 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
PDZD3-207ENST00000527308 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
PDZD3-207ENST00000527308 PIP4K2BP78356 416 aa16.42■□□□□ 0.22
PDZD3-207ENST00000527308 ANKLE2Q86XL3 938 aa16.42■□□□□ 0.22
PDZD3-207ENST00000527308 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
PDZD3-207ENST00000527308 EHBP1L1Q8N3D4 1523 aa16.41■□□□□ 0.22
PDZD3-207ENST00000527308 FBXO31Q5XUX0 539 aaPredicted RBP16.41■□□□□ 0.22
PDZD3-207ENST00000527308 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
PDZD3-207ENST00000527308 MED14O60244 1454 aa16.41■□□□□ 0.22
PDZD3-207ENST00000527308 VWDEQ8N2E2 1590 aa16.4■□□□□ 0.22
PDZD3-207ENST00000527308 KIF3BO15066 747 aa16.4■□□□□ 0.22
PDZD3-207ENST00000527308 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
PDZD3-207ENST00000527308 NLRP1Q9C000 1473 aa16.4■□□□□ 0.22
PDZD3-207ENST00000527308 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
PDZD3-207ENST00000527308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDZD3-207ENST00000527308 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
PDZD3-207ENST00000527308 MIA2Q96PC5 1412 aa16.38■□□□□ 0.21
PDZD3-207ENST00000527308 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
PDZD3-207ENST00000527308 CCDC141Q6ZP82 1450 aa16.37■□□□□ 0.21
PDZD3-207ENST00000527308 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
PDZD3-207ENST00000527308 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
PDZD3-207ENST00000527308 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
PDZD3-207ENST00000527308 CAMSAP2Q08AD1 1489 aa16.32■□□□□ 0.2
PDZD3-207ENST00000527308 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
PDZD3-207ENST00000527308 ZC3H13Q5T200 1668 aaKnown RBP16.31■□□□□ 0.2
PDZD3-207ENST00000527308 SYNMO15061 1565 aa16.31■□□□□ 0.2
PDZD3-207ENST00000527308 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
PDZD3-207ENST00000527308 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
PDZD3-207ENST00000527308 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
PDZD3-207ENST00000527308 TSPY4P0CV99 314 aa16.29■□□□□ 0.2
PDZD3-207ENST00000527308 TSPY10P0CW01 314 aa16.29■□□□□ 0.2
PDZD3-207ENST00000527308 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
PDZD3-207ENST00000527308 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
PDZD3-207ENST00000527308 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
PDZD3-207ENST00000527308 ABCC3O15438 1527 aa16.25■□□□□ 0.19
PDZD3-207ENST00000527308 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
PDZD3-207ENST00000527308 UBR1Q8IWV7 1749 aa16.25■□□□□ 0.19
PDZD3-207ENST00000527308 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
PDZD3-207ENST00000527308 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
PDZD3-207ENST00000527308 XIRP1Q702N8 1843 aaKnown RBP16.2■□□□□ 0.18
PDZD3-207ENST00000527308 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
PDZD3-207ENST00000527308 SCAF11Q99590 1463 aaKnown RBP16.2■□□□□ 0.18
PDZD3-207ENST00000527308 SLIT1O75093 1534 aa16.19■□□□□ 0.18
PDZD3-207ENST00000527308 CEP152O94986 1710 aa16.19■□□□□ 0.18
PDZD3-207ENST00000527308 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
PDZD3-207ENST00000527308 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
PDZD3-207ENST00000527308 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
PDZD3-207ENST00000527308 ARHGAP31Q2M1Z3 1444 aa16.16■□□□□ 0.18
PDZD3-207ENST00000527308 LTKP29376 864 aa16.15■□□□□ 0.18
PDZD3-207ENST00000527308 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
PDZD3-207ENST00000527308 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
PDZD3-207ENST00000527308 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.18
PDZD3-207ENST00000527308 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
PDZD3-207ENST00000527308 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
PDZD3-207ENST00000527308 KDM5AP29375 1690 aaKnown RBP16.12■□□□□ 0.17
PDZD3-207ENST00000527308 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
PDZD3-207ENST00000527308 HRCP23327 699 aa16.11■□□□□ 0.17
PDZD3-207ENST00000527308 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
PDZD3-207ENST00000527308 PIK3C2BO00750 1634 aa16.1■□□□□ 0.17
PDZD3-207ENST00000527308 TMEM2Q9UHN6 1383 aa16.09■□□□□ 0.17
PDZD3-207ENST00000527308 ERBINQ96RT1 1412 aa16.09■□□□□ 0.17
PDZD3-207ENST00000527308 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
PDZD3-207ENST00000527308 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
PDZD3-207ENST00000527308 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
PDZD3-207ENST00000527308 TMEM94Q12767 1356 aa16.06■□□□□ 0.16
PDZD3-207ENST00000527308 KCNA6P17658 529 aa16.06■□□□□ 0.16
PDZD3-207ENST00000527308 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
PDZD3-207ENST00000527308 TET3O43151 1660 aa16.05■□□□□ 0.16
PDZD3-207ENST00000527308 EFCAB6Q5THR3 1501 aa16.05■□□□□ 0.16
PDZD3-207ENST00000527308 KIF15Q9NS87 1388 aa16.05■□□□□ 0.16
PDZD3-207ENST00000527308 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
PDZD3-207ENST00000527308 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
PDZD3-207ENST00000527308 KANK1Q14678 1352 aa16.03■□□□□ 0.16
PDZD3-207ENST00000527308 LMTK2Q8IWU2 1503 aa16.03■□□□□ 0.16
PDZD3-207ENST00000527308 IDI1Q13907 227 aa16.02■□□□□ 0.16
PDZD3-207ENST00000527308 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.16
PDZD3-207ENST00000527308 PROSER2Q86WR7 435 aaPredicted RBP16.02■□□□□ 0.16
PDZD3-207ENST00000527308 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.15
PDZD3-207ENST00000527308 NWD1Q149M9 1564 aa16.01■□□□□ 0.15
PDZD3-207ENST00000527308 FOXD1Q16676 465 aa16.01■□□□□ 0.15
PDZD3-207ENST00000527308 ABCC5O15440 1437 aa16.01■□□□□ 0.15
PDZD3-207ENST00000527308 RRP7BPQ9NSQ0 103 aa16■□□□□ 0.15
PDZD3-207ENST00000527308 SLC26A8Q96RN1 970 aa15.99■□□□□ 0.15
PDZD3-207ENST00000527308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDZD3-207ENST00000527308 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
PDZD3-207ENST00000527308 NOS1P29475 1434 aa15.98■□□□□ 0.15
PDZD3-207ENST00000527308 MSH6P52701 1360 aa15.98■□□□□ 0.15
PDZD3-207ENST00000527308 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
PDZD3-207ENST00000527308 ADGRB3O60242 1522 aa15.97■□□□□ 0.15
PDZD3-207ENST00000527308 DAPK1P53355 1430 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms