RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 ZC3H13Q5T200 1668 aaKnown RBP28.17■■■□□ 2.1
TRIM3-205ENST00000527237 KIF3BO15066 747 aa28.17■■■□□ 2.1
TRIM3-205ENST00000527237 FAM135AQ9P2D6 1515 aa28.15■■■□□ 2.1
TRIM3-205ENST00000527237 HSPA2P54652 639 aa28.15■■■□□ 2.1
TRIM3-205ENST00000527237 ZNF142P52746 1687 aaPredicted RBP28.15■■■□□ 2.1
TRIM3-205ENST00000527237 ZMYM3Q14202 1370 aa28.14■■■□□ 2.1
TRIM3-205ENST00000527237 STRCQ7RTU9 1775 aa28.13■■■□□ 2.09
TRIM3-205ENST00000527237 DEPDC5O75140 1603 aa28.13■■■□□ 2.09
TRIM3-205ENST00000527237 KIF15Q9NS87 1388 aa28.12■■■□□ 2.09
TRIM3-205ENST00000527237 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
TRIM3-205ENST00000527237 CAMSAP1Q5T5Y3 1602 aa28.1■■■□□ 2.09
TRIM3-205ENST00000527237 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
TRIM3-205ENST00000527237 FAM50AQ14320 339 aaKnown RBP28.1■■■□□ 2.09
TRIM3-205ENST00000527237 PTPRKQ15262 1439 aa28.09■■■□□ 2.09
TRIM3-205ENST00000527237 NPATQ14207 1427 aa28.09■■■□□ 2.09
TRIM3-205ENST00000527237 ADGRL2O95490 1459 aa28.08■■■□□ 2.09
TRIM3-205ENST00000527237 ABCC3O15438 1527 aa28.08■■■□□ 2.09
TRIM3-205ENST00000527237 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.09
TRIM3-205ENST00000527237 ERBINQ96RT1 1412 aa28.07■■■□□ 2.08
TRIM3-205ENST00000527237 CHIC2Q9UKJ5 165 aa28.06■■■□□ 2.08
TRIM3-205ENST00000527237 RRP7BPQ9NSQ0 103 aa28.05■■■□□ 2.08
TRIM3-205ENST00000527237 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
TRIM3-205ENST00000527237 PZPP20742 1482 aa28.03■■■□□ 2.08
TRIM3-205ENST00000527237 PPP6R1Q9UPN7 881 aa28.03■■■□□ 2.08
TRIM3-205ENST00000527237 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
TRIM3-205ENST00000527237 ANKRD30AQ9BXX3 1397 aa28.01■■■□□ 2.07
TRIM3-205ENST00000527237 WASHC2CQ9Y4E1 1318 aa27.97■■■□□ 2.07
TRIM3-205ENST00000527237 VWDEQ8N2E2 1590 aa27.94■■■□□ 2.06
TRIM3-205ENST00000527237 SPATA31D1Q6ZQQ2 1576 aa27.93■■■□□ 2.06
TRIM3-205ENST00000527237 FBXO31Q5XUX0 539 aaPredicted RBP27.92■■■□□ 2.06
TRIM3-205ENST00000527237 UNC13BO14795 1591 aa27.9■■■□□ 2.06
TRIM3-205ENST00000527237 POLR1AO95602 1720 aaPredicted RBP27.9■■■□□ 2.06
TRIM3-205ENST00000527237 RRBP1Q9P2E9 1410 aaKnown RBP27.9■■■□□ 2.06
TRIM3-205ENST00000527237 TNRQ92752 1358 aa27.88■■■□□ 2.05
TRIM3-205ENST00000527237 A2ML1A8K2U0 1454 aa27.88■■■□□ 2.05
TRIM3-205ENST00000527237 ERVK-7P63135 1459 aa27.88■■■□□ 2.05
TRIM3-205ENST00000527237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
TRIM3-205ENST00000527237 ANKRD50Q9ULJ7 1429 aa27.86■■■□□ 2.05
TRIM3-205ENST00000527237 LMTK2Q8IWU2 1503 aa27.84■■■□□ 2.05
TRIM3-205ENST00000527237 ITGAEP38570 1179 aa27.84■■■□□ 2.05
TRIM3-205ENST00000527237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.84■■■□□ 2.05
TRIM3-205ENST00000527237 GCC2Q8IWJ2 1684 aa27.84■■■□□ 2.05
TRIM3-205ENST00000527237 EFCAB6Q5THR3 1501 aa27.83■■■□□ 2.05
TRIM3-205ENST00000527237 UBR1Q8IWV7 1749 aa27.82■■■□□ 2.04
TRIM3-205ENST00000527237 ROCK1Q13464 1354 aa27.82■■■□□ 2.04
TRIM3-205ENST00000527237 TET3O43151 1660 aa27.81■■■□□ 2.04
TRIM3-205ENST00000527237 PLA2R1Q13018 1463 aa27.79■■■□□ 2.04
TRIM3-205ENST00000527237 NLRP1Q9C000 1473 aa27.78■■■□□ 2.04
TRIM3-205ENST00000527237 ARHGAP31Q2M1Z3 1444 aa27.78■■■□□ 2.04
TRIM3-205ENST00000527237 KANK1Q14678 1352 aa27.78■■■□□ 2.04
TRIM3-205ENST00000527237 IQGAP3Q86VI3 1631 aa27.78■■■□□ 2.04
TRIM3-205ENST00000527237 SYNMO15061 1565 aa27.77■■■□□ 2.04
TRIM3-205ENST00000527237 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
TRIM3-205ENST00000527237 PIK3C2BO00750 1634 aa27.76■■■□□ 2.03
TRIM3-205ENST00000527237 NEURL4Q96JN8 1562 aa27.76■■■□□ 2.03
TRIM3-205ENST00000527237 E9PCH4 1651 aa27.75■■■□□ 2.03
TRIM3-205ENST00000527237 MYO5BQ9ULV0 1848 aa27.73■■■□□ 2.03
TRIM3-205ENST00000527237 PTPRTO14522 1441 aa27.72■■■□□ 2.03
TRIM3-205ENST00000527237 NCKAP5LQ9HCH0 1330 aa27.7■■■□□ 2.03
TRIM3-205ENST00000527237 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
TRIM3-205ENST00000527237 IQGAP1P46940 1657 aa27.63■■■□□ 2.01
TRIM3-205ENST00000527237 NOS1P29475 1434 aa27.63■■■□□ 2.01
TRIM3-205ENST00000527237 LTBP4Q8N2S1 1624 aa27.63■■■□□ 2.01
TRIM3-205ENST00000527237 DMRT2Q9Y5R5 561 aa27.62■■■□□ 2.01
TRIM3-205ENST00000527237 NAIPQ13075 1403 aa27.61■■■□□ 2.01
TRIM3-205ENST00000527237 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
TRIM3-205ENST00000527237 SPHKAPQ2M3C7 1700 aa27.59■■■□□ 2.01
TRIM3-205ENST00000527237 ADGRB3O60242 1522 aa27.58■■■□□ 2.01
TRIM3-205ENST00000527237 PKD2Q13563 968 aa27.58■■■□□ 2.01
TRIM3-205ENST00000527237 ILDR1Q86SU0 546 aaPredicted RBP27.57■■■□□ 2
TRIM3-205ENST00000527237 SLIT1O75093 1534 aa27.55■■■□□ 2
TRIM3-205ENST00000527237 HFM1A2PYH4 1435 aa27.54■■■□□ 2
TRIM3-205ENST00000527237 NUP155O75694 1391 aa27.54■■■□□ 2
TRIM3-205ENST00000527237 ARHGAP23Q9P227 1491 aa27.53■■■□□ 2
TRIM3-205ENST00000527237 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
TRIM3-205ENST00000527237 STRCP1A6NGW2 1772 aa27.53■■■□□ 2
TRIM3-205ENST00000527237 MED14O60244 1454 aa27.52■■■□□ 2
TRIM3-205ENST00000527237 TMEM131LA2VDJ0 1609 aa27.51■■□□□ 1.99
TRIM3-205ENST00000527237 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
TRIM3-205ENST00000527237 CERKQ8TCT0 537 aa27.49■■□□□ 1.99
TRIM3-205ENST00000527237 SCAF11Q99590 1463 aaKnown RBP27.49■■□□□ 1.99
TRIM3-205ENST00000527237 ZNF335Q9H4Z2 1342 aaPredicted RBP27.48■■□□□ 1.99
TRIM3-205ENST00000527237 IDI1Q13907 227 aa27.47■■□□□ 1.99
TRIM3-205ENST00000527237 ANKLE2Q86XL3 938 aa27.46■■□□□ 1.99
TRIM3-205ENST00000527237 FBXO41Q8TF61 875 aa27.42■■□□□ 1.98
TRIM3-205ENST00000527237 TMEM2Q9UHN6 1383 aa27.41■■□□□ 1.98
TRIM3-205ENST00000527237 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
TRIM3-205ENST00000527237 LTKP29376 864 aa27.39■■□□□ 1.98
TRIM3-205ENST00000527237 STAG3Q9UJ98 1225 aa27.38■■□□□ 1.97
TRIM3-205ENST00000527237 KIF1BO60333 1816 aa27.37■■□□□ 1.97
TRIM3-205ENST00000527237 SLC52A1Q9NWF4 448 aa27.36■■□□□ 1.97
TRIM3-205ENST00000527237 TRPM2O94759 1503 aa27.36■■□□□ 1.97
TRIM3-205ENST00000527237 XIRP1Q702N8 1843 aaKnown RBP27.34■■□□□ 1.97
TRIM3-205ENST00000527237 IQSEC2Q5JU85 1478 aa27.34■■□□□ 1.97
TRIM3-205ENST00000527237 TXNDC2Q86VQ3 553 aa27.34■■□□□ 1.97
TRIM3-205ENST00000527237 ZFYVE9O95405 1425 aa27.33■■□□□ 1.97
TRIM3-205ENST00000527237 CPS1P31327 1500 aa27.33■■□□□ 1.97
TRIM3-205ENST00000527237 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
TRIM3-205ENST00000527237 RIMS2Q9UQ26 1411 aa27.28■■□□□ 1.96
TRIM3-205ENST00000527237 EID1Q9Y6B2 187 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms