RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 NAIPQ13075 1403 aa25.27■■□□□ 1.64
SMCO4-204ENST00000527149 RIMS1Q86UR5 1692 aaKnown RBP25.26■■□□□ 1.63
SMCO4-204ENST00000527149 KIF3BO15066 747 aa25.26■■□□□ 1.63
SMCO4-204ENST00000527149 HFM1A2PYH4 1435 aa25.26■■□□□ 1.63
SMCO4-204ENST00000527149 FAM135AQ9P2D6 1515 aa25.25■■□□□ 1.63
SMCO4-204ENST00000527149 UNC13BO14795 1591 aa25.22■■□□□ 1.63
SMCO4-204ENST00000527149 KDM5DQ9BY66 1539 aa25.22■■□□□ 1.63
SMCO4-204ENST00000527149 MROH2AA6NES4 1674 aa25.21■■□□□ 1.63
SMCO4-204ENST00000527149 CLTCQ00610 1675 aaKnown RBP25.2■■□□□ 1.63
SMCO4-204ENST00000527149 VWDEQ8N2E2 1590 aa25.2■■□□□ 1.62
SMCO4-204ENST00000527149 PTPRMP28827 1452 aa25.2■■□□□ 1.62
SMCO4-204ENST00000527149 GGT6Q6P531 493 aa25.19■■□□□ 1.62
SMCO4-204ENST00000527149 ZC3H13Q5T200 1668 aaKnown RBP25.19■■□□□ 1.62
SMCO4-204ENST00000527149 ABCC3O15438 1527 aa25.18■■□□□ 1.62
SMCO4-204ENST00000527149 CNTLNQ9NXG0 1405 aa25.18■■□□□ 1.62
SMCO4-204ENST00000527149 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
SMCO4-204ENST00000527149 CEP152O94986 1710 aa25.16■■□□□ 1.62
SMCO4-204ENST00000527149 C3P01024 1663 aa25.15■■□□□ 1.62
SMCO4-204ENST00000527149 LMTK2Q8IWU2 1503 aa25.12■■□□□ 1.61
SMCO4-204ENST00000527149 CAMSAP1Q5T5Y3 1602 aa25.11■■□□□ 1.61
SMCO4-204ENST00000527149 IQGAP3Q86VI3 1631 aa25.09■■□□□ 1.61
SMCO4-204ENST00000527149 ZMYM3Q14202 1370 aa25.06■■□□□ 1.6
SMCO4-204ENST00000527149 WASHC2CQ9Y4E1 1318 aa25.06■■□□□ 1.6
SMCO4-204ENST00000527149 PZPP20742 1482 aa25.05■■□□□ 1.6
SMCO4-204ENST00000527149 EFCAB6Q5THR3 1501 aa25.05■■□□□ 1.6
SMCO4-204ENST00000527149 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
SMCO4-204ENST00000527149 KANK1Q14678 1352 aa25.04■■□□□ 1.6
SMCO4-204ENST00000527149 TET3O43151 1660 aa25.04■■□□□ 1.6
SMCO4-204ENST00000527149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.03■■□□□ 1.6
SMCO4-204ENST00000527149 ESF1Q9H501 851 aaKnown RBP25.03■■□□□ 1.6
SMCO4-204ENST00000527149 ARHGAP31Q2M1Z3 1444 aa25.02■■□□□ 1.6
SMCO4-204ENST00000527149 CEBPAP49715 358 aaPredicted RBP25.01■■□□□ 1.59
SMCO4-204ENST00000527149 NPATQ14207 1427 aa25■■□□□ 1.59
SMCO4-204ENST00000527149 NUP155O75694 1391 aa24.99■■□□□ 1.59
SMCO4-204ENST00000527149 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
SMCO4-204ENST00000527149 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
SMCO4-204ENST00000527149 SPATA31D1Q6ZQQ2 1576 aa24.97■■□□□ 1.59
SMCO4-204ENST00000527149 E9PCH4 1651 aa24.96■■□□□ 1.59
SMCO4-204ENST00000527149 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
SMCO4-204ENST00000527149 SETD1BQ9UPS6 1966 aaKnown RBP24.95■■□□□ 1.58
SMCO4-204ENST00000527149 ERVK-7P63135 1459 aa24.95■■□□□ 1.58
SMCO4-204ENST00000527149 RPRD2Q5VT52 1461 aaKnown RBP24.93■■□□□ 1.58
SMCO4-204ENST00000527149 MYO3AQ8NEV4 1616 aa24.91■■□□□ 1.58
SMCO4-204ENST00000527149 CFAP65Q6ZU64 1925 aaKnown RBP24.91■■□□□ 1.58
SMCO4-204ENST00000527149 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
SMCO4-204ENST00000527149 FBXO31Q5XUX0 539 aaPredicted RBP24.9■■□□□ 1.58
SMCO4-204ENST00000527149 NOS1P29475 1434 aa24.89■■□□□ 1.58
SMCO4-204ENST00000527149 SYNMO15061 1565 aa24.88■■□□□ 1.57
SMCO4-204ENST00000527149 LMTK3Q96Q04 1460 aa24.88■■□□□ 1.57
SMCO4-204ENST00000527149 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
SMCO4-204ENST00000527149 TNRQ92752 1358 aa24.86■■□□□ 1.57
SMCO4-204ENST00000527149 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
SMCO4-204ENST00000527149 HRCP23327 699 aa24.85■■□□□ 1.57
SMCO4-204ENST00000527149 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
SMCO4-204ENST00000527149 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.56
SMCO4-204ENST00000527149 SPHKAPQ2M3C7 1700 aa24.82■■□□□ 1.56
SMCO4-204ENST00000527149 UHRF1BP1Q6BDS2 1440 aa24.82■■□□□ 1.56
SMCO4-204ENST00000527149 CEP170BQ9Y4F5 1589 aaPredicted RBP24.82■■□□□ 1.56
SMCO4-204ENST00000527149 PIK3C2BO00750 1634 aa24.8■■□□□ 1.56
SMCO4-204ENST00000527149 NLRP1Q9C000 1473 aa24.8■■□□□ 1.56
SMCO4-204ENST00000527149 PTPRTO14522 1441 aa24.79■■□□□ 1.56
SMCO4-204ENST00000527149 A2ML1A8K2U0 1454 aa24.78■■□□□ 1.56
SMCO4-204ENST00000527149 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
SMCO4-204ENST00000527149 PLA2R1Q13018 1463 aa24.77■■□□□ 1.56
SMCO4-204ENST00000527149 TRPM2O94759 1503 aa24.76■■□□□ 1.55
SMCO4-204ENST00000527149 MPHOSPH9Q99550 1183 aa24.76■■□□□ 1.55
SMCO4-204ENST00000527149 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
SMCO4-204ENST00000527149 PKD2Q13563 968 aa24.75■■□□□ 1.55
SMCO4-204ENST00000527149 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
SMCO4-204ENST00000527149 KDM5AP29375 1690 aaKnown RBP24.72■■□□□ 1.55
SMCO4-204ENST00000527149 CLTCL1P53675 1640 aa24.7■■□□□ 1.54
SMCO4-204ENST00000527149 ADGRB3O60242 1522 aa24.7■■□□□ 1.54
SMCO4-204ENST00000527149 FOXD1Q16676 465 aa24.67■■□□□ 1.54
SMCO4-204ENST00000527149 TMEM131LA2VDJ0 1609 aa24.66■■□□□ 1.54
SMCO4-204ENST00000527149 IDI1Q13907 227 aa24.66■■□□□ 1.54
SMCO4-204ENST00000527149 PCGF6Q9BYE7 350 aa24.66■■□□□ 1.54
SMCO4-204ENST00000527149 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
SMCO4-204ENST00000527149 HSPA2P54652 639 aa24.65■■□□□ 1.54
SMCO4-204ENST00000527149 MYO5BQ9ULV0 1848 aa24.64■■□□□ 1.54
SMCO4-204ENST00000527149 STRCQ7RTU9 1775 aa24.61■■□□□ 1.53
SMCO4-204ENST00000527149 ARHGAP23Q9P227 1491 aa24.6■■□□□ 1.53
SMCO4-204ENST00000527149 SLIT1O75093 1534 aa24.6■■□□□ 1.53
SMCO4-204ENST00000527149 ANKRD30BQ9BXX2 1392 aa24.59■■□□□ 1.53
SMCO4-204ENST00000527149 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.53
SMCO4-204ENST00000527149 KIF1BO60333 1816 aa24.56■■□□□ 1.52
SMCO4-204ENST00000527149 POLR1AO95602 1720 aaPredicted RBP24.56■■□□□ 1.52
SMCO4-204ENST00000527149 NEURL4Q96JN8 1562 aa24.55■■□□□ 1.52
SMCO4-204ENST00000527149 CCDC144AA2RUR9 1427 aa24.55■■□□□ 1.52
SMCO4-204ENST00000527149 THEMISQ8N1K5 641 aaPredicted RBP24.54■■□□□ 1.52
SMCO4-204ENST00000527149 TMEM2Q9UHN6 1383 aa24.54■■□□□ 1.52
SMCO4-204ENST00000527149 ZFYVE9O95405 1425 aa24.53■■□□□ 1.52
SMCO4-204ENST00000527149 SPATA31E1Q6ZUB1 1445 aa24.52■■□□□ 1.52
SMCO4-204ENST00000527149 SCAF11Q99590 1463 aaKnown RBP24.48■■□□□ 1.51
SMCO4-204ENST00000527149 NEXMIFQ5QGS0 1516 aa24.47■■□□□ 1.51
SMCO4-204ENST00000527149 MED14O60244 1454 aa24.47■■□□□ 1.51
SMCO4-204ENST00000527149 STAG3Q9UJ98 1225 aa24.47■■□□□ 1.51
SMCO4-204ENST00000527149 RIMS2Q9UQ26 1411 aa24.45■■□□□ 1.51
SMCO4-204ENST00000527149 NCKAP5LQ9HCH0 1330 aa24.44■■□□□ 1.5
SMCO4-204ENST00000527149 CHGAP10645 457 aaKnown RBP24.44■■□□□ 1.5
SMCO4-204ENST00000527149 LTKP29376 864 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms