RNA–Protein interactions for RNA: ENST00000527116.5

SNX19-205, Transcript of sorting nexin 19, humanhuman

TSL 2

Gene SNX19, Length 1,323 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-205ENST00000527116 PTPRMP28827 1452 aa13.38□□□□□ -0.27
SNX19-205ENST00000527116 C3P01024 1663 aa13.37□□□□□ -0.27
SNX19-205ENST00000527116 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
SNX19-205ENST00000527116 ITGAEP38570 1179 aa13.37□□□□□ -0.27
SNX19-205ENST00000527116 CEP152O94986 1710 aa13.36□□□□□ -0.27
SNX19-205ENST00000527116 NAIPQ13075 1403 aa13.35□□□□□ -0.27
SNX19-205ENST00000527116 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
SNX19-205ENST00000527116 UNC13BO14795 1591 aa13.35□□□□□ -0.27
SNX19-205ENST00000527116 ABCC3O15438 1527 aa13.35□□□□□ -0.27
SNX19-205ENST00000527116 ANKRD50Q9ULJ7 1429 aa13.35□□□□□ -0.27
SNX19-205ENST00000527116 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
SNX19-205ENST00000527116 KIF3BO15066 747 aa13.34□□□□□ -0.27
SNX19-205ENST00000527116 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
SNX19-205ENST00000527116 ZC3H13Q5T200 1668 aaKnown RBP13.32□□□□□ -0.28
SNX19-205ENST00000527116 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
SNX19-205ENST00000527116 FAM135AQ9P2D6 1515 aa13.31□□□□□ -0.28
SNX19-205ENST00000527116 GGT6Q6P531 493 aa13.3□□□□□ -0.28
SNX19-205ENST00000527116 LMTK2Q8IWU2 1503 aa13.28□□□□□ -0.28
SNX19-205ENST00000527116 IQGAP3Q86VI3 1631 aa13.28□□□□□ -0.28
SNX19-205ENST00000527116 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
SNX19-205ENST00000527116 CNTLNQ9NXG0 1405 aa13.28□□□□□ -0.28
SNX19-205ENST00000527116 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
SNX19-205ENST00000527116 EFCAB6Q5THR3 1501 aa13.26□□□□□ -0.29
SNX19-205ENST00000527116 CFAP65Q6ZU64 1925 aaKnown RBP13.26□□□□□ -0.29
SNX19-205ENST00000527116 TET3O43151 1660 aa13.25□□□□□ -0.29
SNX19-205ENST00000527116 PZPP20742 1482 aa13.25□□□□□ -0.29
SNX19-205ENST00000527116 E9PCH4 1651 aa13.24□□□□□ -0.29
SNX19-205ENST00000527116 NPATQ14207 1427 aa13.24□□□□□ -0.29
SNX19-205ENST00000527116 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
SNX19-205ENST00000527116 PREX1Q8TCU6 1659 aa13.24□□□□□ -0.29
SNX19-205ENST00000527116 SPATA31D1Q6ZQQ2 1576 aa13.23□□□□□ -0.29
SNX19-205ENST00000527116 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
SNX19-205ENST00000527116 MYO3AQ8NEV4 1616 aa13.22□□□□□ -0.29
SNX19-205ENST00000527116 SETD1BQ9UPS6 1966 aaKnown RBP13.22□□□□□ -0.29
SNX19-205ENST00000527116 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
SNX19-205ENST00000527116 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
SNX19-205ENST00000527116 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
SNX19-205ENST00000527116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX19-205ENST00000527116 SYNMO15061 1565 aa13.21□□□□□ -0.29
SNX19-205ENST00000527116 ERVK-7P63135 1459 aa13.21□□□□□ -0.29
SNX19-205ENST00000527116 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
SNX19-205ENST00000527116 ZNF142P52746 1687 aaPredicted RBP13.2□□□□□ -0.3
SNX19-205ENST00000527116 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
SNX19-205ENST00000527116 NUP155O75694 1391 aa13.18□□□□□ -0.3
SNX19-205ENST00000527116 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
SNX19-205ENST00000527116 NOS1P29475 1434 aa13.17□□□□□ -0.3
SNX19-205ENST00000527116 UGGT1Q9NYU2 1555 aa13.16□□□□□ -0.3
SNX19-205ENST00000527116 PIK3C2BO00750 1634 aa13.16□□□□□ -0.3
SNX19-205ENST00000527116 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
SNX19-205ENST00000527116 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
SNX19-205ENST00000527116 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
SNX19-205ENST00000527116 KANK1Q14678 1352 aa13.14□□□□□ -0.31
SNX19-205ENST00000527116 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
SNX19-205ENST00000527116 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
SNX19-205ENST00000527116 TNRQ92752 1358 aa13.13□□□□□ -0.31
SNX19-205ENST00000527116 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
SNX19-205ENST00000527116 STRCQ7RTU9 1775 aa13.13□□□□□ -0.31
SNX19-205ENST00000527116 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
SNX19-205ENST00000527116 MYO5BQ9ULV0 1848 aa13.12□□□□□ -0.31
SNX19-205ENST00000527116 PTPRTO14522 1441 aa13.11□□□□□ -0.31
SNX19-205ENST00000527116 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
SNX19-205ENST00000527116 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
SNX19-205ENST00000527116 HSPA2P54652 639 aa13.1□□□□□ -0.31
SNX19-205ENST00000527116 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
SNX19-205ENST00000527116 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
SNX19-205ENST00000527116 CLTCL1P53675 1640 aa13.09□□□□□ -0.31
SNX19-205ENST00000527116 TRPM2O94759 1503 aa13.09□□□□□ -0.31
SNX19-205ENST00000527116 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.32
SNX19-205ENST00000527116 TMEM131LA2VDJ0 1609 aa13.08□□□□□ -0.32
SNX19-205ENST00000527116 FOXD1Q16676 465 aa13.07□□□□□ -0.32
SNX19-205ENST00000527116 ADGRB3O60242 1522 aa13.07□□□□□ -0.32
SNX19-205ENST00000527116 NEURL4Q96JN8 1562 aa13.06□□□□□ -0.32
SNX19-205ENST00000527116 PKD2Q13563 968 aa13.06□□□□□ -0.32
SNX19-205ENST00000527116 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
SNX19-205ENST00000527116 MPHOSPH9Q99550 1183 aa13.06□□□□□ -0.32
SNX19-205ENST00000527116 HRCP23327 699 aa13.05□□□□□ -0.32
SNX19-205ENST00000527116 IDI1Q13907 227 aa13.05□□□□□ -0.32
SNX19-205ENST00000527116 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
SNX19-205ENST00000527116 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
SNX19-205ENST00000527116 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
SNX19-205ENST00000527116 SLIT1O75093 1534 aa13.03□□□□□ -0.32
SNX19-205ENST00000527116 ZFYVE9O95405 1425 aa13□□□□□ -0.33
SNX19-205ENST00000527116 KIF1BO60333 1816 aa12.99□□□□□ -0.33
SNX19-205ENST00000527116 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
SNX19-205ENST00000527116 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
SNX19-205ENST00000527116 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
SNX19-205ENST00000527116 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
SNX19-205ENST00000527116 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
SNX19-205ENST00000527116 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
SNX19-205ENST00000527116 NEXMIFQ5QGS0 1516 aa12.97□□□□□ -0.33
SNX19-205ENST00000527116 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
SNX19-205ENST00000527116 LTKP29376 864 aa12.96□□□□□ -0.33
SNX19-205ENST00000527116 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
SNX19-205ENST00000527116 MED14O60244 1454 aa12.96□□□□□ -0.33
SNX19-205ENST00000527116 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.34
SNX19-205ENST00000527116 PPLO60437 1756 aa12.95□□□□□ -0.34
SNX19-205ENST00000527116 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
SNX19-205ENST00000527116 SCAF11Q99590 1463 aaKnown RBP12.94□□□□□ -0.34
SNX19-205ENST00000527116 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
SNX19-205ENST00000527116 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms