RNA–Protein interactions for RNA: ENST00000527026.1

PTPRJ-204, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 4

Gene PTPRJ, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-204ENST00000527026 ZNF777Q9ULD5 760 aaPredicted RBP14.06□□□□□ -0.16
PTPRJ-204ENST00000527026 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
PTPRJ-204ENST00000527026 CIZ1Q9ULV3 898 aaPredicted RBP14.05□□□□□ -0.16
PTPRJ-204ENST00000527026 SCAPERQ9BY12 1400 aa14.05□□□□□ -0.16
PTPRJ-204ENST00000527026 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
PTPRJ-204ENST00000527026 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
PTPRJ-204ENST00000527026 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
PTPRJ-204ENST00000527026 ARID4BQ4LE39 1312 aaPredicted RBP14.04□□□□□ -0.16
PTPRJ-204ENST00000527026 MYO5CQ9NQX4 1742 aa14.04□□□□□ -0.16
PTPRJ-204ENST00000527026 GSE1Q14687 1217 aa14.03□□□□□ -0.16
PTPRJ-204ENST00000527026 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
PTPRJ-204ENST00000527026 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
PTPRJ-204ENST00000527026 CDC42BPBQ9Y5S2 1711 aa14.02□□□□□ -0.16
PTPRJ-204ENST00000527026 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
PTPRJ-204ENST00000527026 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
PTPRJ-204ENST00000527026 MAMSTRQ6ZN01 415 aa14.01□□□□□ -0.17
PTPRJ-204ENST00000527026 ADGRL1O94910 1474 aa14□□□□□ -0.17
PTPRJ-204ENST00000527026 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
PTPRJ-204ENST00000527026 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
PTPRJ-204ENST00000527026 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
PTPRJ-204ENST00000527026 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
PTPRJ-204ENST00000527026 RICTORQ6R327 1708 aa13.98□□□□□ -0.17
PTPRJ-204ENST00000527026 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
PTPRJ-204ENST00000527026 CDC42BPAQ5VT25 1732 aa13.97□□□□□ -0.17
PTPRJ-204ENST00000527026 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.17
PTPRJ-204ENST00000527026 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
PTPRJ-204ENST00000527026 MLECQ14165 292 aa13.96□□□□□ -0.17
PTPRJ-204ENST00000527026 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
PTPRJ-204ENST00000527026 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
PTPRJ-204ENST00000527026 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
PTPRJ-204ENST00000527026 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
PTPRJ-204ENST00000527026 CCDC61Q9Y6R9 512 aa13.95□□□□□ -0.18
PTPRJ-204ENST00000527026 VPS8Q8N3P4 1428 aa13.95□□□□□ -0.18
PTPRJ-204ENST00000527026 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
PTPRJ-204ENST00000527026 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
PTPRJ-204ENST00000527026 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
PTPRJ-204ENST00000527026 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
PTPRJ-204ENST00000527026 ARHGEF12Q9NZN5 1544 aa13.92□□□□□ -0.18
PTPRJ-204ENST00000527026 POGZQ7Z3K3 1410 aa13.91□□□□□ -0.18
PTPRJ-204ENST00000527026 PREX2Q70Z35 1606 aa13.9□□□□□ -0.18
PTPRJ-204ENST00000527026 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
PTPRJ-204ENST00000527026 FAM163AQ96GL9 167 aaPredicted RBP13.9□□□□□ -0.18
PTPRJ-204ENST00000527026 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
PTPRJ-204ENST00000527026 ATP10AO60312 1499 aa13.89□□□□□ -0.19
PTPRJ-204ENST00000527026 ZFYVE16Q7Z3T8 1539 aa13.89□□□□□ -0.19
PTPRJ-204ENST00000527026 ZNF518AQ6AHZ1 1483 aa13.88□□□□□ -0.19
PTPRJ-204ENST00000527026 LCE2DQ5TA82 110 aaPredicted RBP13.88□□□□□ -0.19
PTPRJ-204ENST00000527026 SPAG9O60271 1321 aaKnown RBP13.88□□□□□ -0.19
PTPRJ-204ENST00000527026 ZMYM4Q5VZL5 1548 aa13.87□□□□□ -0.19
PTPRJ-204ENST00000527026 TIAM1Q13009 1591 aa13.87□□□□□ -0.19
PTPRJ-204ENST00000527026 CHRM1P11229 460 aaPredicted RBP13.86□□□□□ -0.19
PTPRJ-204ENST00000527026 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
PTPRJ-204ENST00000527026 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
PTPRJ-204ENST00000527026 LRRC9Q6ZRR7 1453 aa13.86□□□□□ -0.19
PTPRJ-204ENST00000527026 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
PTPRJ-204ENST00000527026 BCORL1Q5H9F3 1711 aa13.85□□□□□ -0.19
PTPRJ-204ENST00000527026 SAMD9LQ8IVG5 1584 aa13.85□□□□□ -0.19
PTPRJ-204ENST00000527026 RGL2O15211 777 aa13.85□□□□□ -0.19
PTPRJ-204ENST00000527026 ADAMTSL3P82987 1691 aa13.85□□□□□ -0.19
PTPRJ-204ENST00000527026 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
PTPRJ-204ENST00000527026 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 PYGBP11216 843 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 MLH3Q9UHC1 1453 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 ABCC1P33527 1531 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
PTPRJ-204ENST00000527026 POTEFA5A3E0 1075 aa13.83□□□□□ -0.2
PTPRJ-204ENST00000527026 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
PTPRJ-204ENST00000527026 PLEKHH2Q8IVE3 1493 aa13.82□□□□□ -0.2
PTPRJ-204ENST00000527026 CEBPAP49715 358 aaPredicted RBP13.82□□□□□ -0.2
PTPRJ-204ENST00000527026 KDM5CP41229 1560 aa13.82□□□□□ -0.2
PTPRJ-204ENST00000527026 C9orf84Q5VXU9 1444 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 KIDINS220Q9ULH0 1771 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 MAP3K1Q13233 1512 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 SYCP2Q9BX26 1530 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 MAP3K13O43283 966 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 TSPY4P0CV99 314 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 TSPY10P0CW01 314 aa13.81□□□□□ -0.2
PTPRJ-204ENST00000527026 PTPRMP28827 1452 aa13.8□□□□□ -0.2
PTPRJ-204ENST00000527026 ESF1Q9H501 851 aaKnown RBP13.8□□□□□ -0.2
PTPRJ-204ENST00000527026 SETD1BQ9UPS6 1966 aaKnown RBP13.8□□□□□ -0.2
PTPRJ-204ENST00000527026 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
PTPRJ-204ENST00000527026 TIE1P35590 1138 aa13.79□□□□□ -0.2
PTPRJ-204ENST00000527026 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
PTPRJ-204ENST00000527026 RNF25Q96BH1 459 aaPredicted RBP13.79□□□□□ -0.2
PTPRJ-204ENST00000527026 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
PTPRJ-204ENST00000527026 GGT6Q6P531 493 aa13.78□□□□□ -0.2
PTPRJ-204ENST00000527026 MBD5Q9P267 1494 aa13.78□□□□□ -0.2
PTPRJ-204ENST00000527026 RIMS1Q86UR5 1692 aaKnown RBP13.78□□□□□ -0.2
PTPRJ-204ENST00000527026 DIP2CQ9Y2E4 1556 aa13.77□□□□□ -0.21
PTPRJ-204ENST00000527026 ABCA6Q8N139 1617 aa13.76□□□□□ -0.21
PTPRJ-204ENST00000527026 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
PTPRJ-204ENST00000527026 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
PTPRJ-204ENST00000527026 SEC24BO95487 1268 aa13.73□□□□□ -0.21
PTPRJ-204ENST00000527026 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
PTPRJ-204ENST00000527026 KIF3BO15066 747 aa13.72□□□□□ -0.21
PTPRJ-204ENST00000527026 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
PTPRJ-204ENST00000527026 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms